Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc285.5 Carica papaya HOM05D004135 ORTHO05D005558 5.2e-165 584.3 297 100.0
Gohir.A05G111900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 6.1e-150 534.3 290 91.7
MELO3C007042.2 Cucumis melo HOM05D004135 ORTHO05D005558 2.3e-149 532.3 289 91.7
Ciclev10016127m.g Citrus clementina HOM05D004135 ORTHO05D005558 3.0e-149 531.9 292 91.1
THA.LOC104814339 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 3.0e-149 531.9 293 90.4
CsaV3_6G052670 Cucumis sativus L. HOM05D004135 ORTHO05D005558 1.2e-148 530.0 289 91.0
THA.LOC104798582 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 2.0e-148 529.3 293 89.8
Gorai.005G119100 Gossypium raimondii HOM05D004135 ORTHO05D005558 3.4e-148 528.5 292 89.7
ClCG01G025420 Citrullus lanatus HOM05D004135 ORTHO05D005558 9.8e-148 526.9 289 90.3
Gohir.D02G104900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 9.8e-148 526.9 292 89.4
Potri.011G155800 Populus trichocarpa HOM05D004135 ORTHO05D005558 9.8e-148 526.9 290 91.4
Manes.06G053900 Manihot esculenta HOM05D004135 ORTHO05D005558 1.3e-147 526.6 289 91.3
CiPaw.09G148400 Carya illinoinensis HOM05D004135 ORTHO05D005558 2.2e-147 525.8 290 90.0
Gohir.A02G088700 Gossypium hirsutum HOM05D004135 ORTHO05D005558 2.2e-147 525.8 292 89.4
Aa31LG6G11870 Aethionema arabicum HOM05D004135 ORTHO05D005558 6.3e-147 524.2 293 88.4
Manes.14G126900 Manihot esculenta HOM05D004135 ORTHO05D005558 6.3e-147 524.2 289 91.7
Sp1g26530 Schrenkiella parvula HOM05D004135 ORTHO05D005558 1.1e-146 523.5 293 87.4
Cfa000762 Carpinus fangiana HOM05D004135 ORTHO05D005558 1.4e-146 523.1 290 89.3
QL05p064858 Quercus lobata HOM05D004135 ORTHO05D005558 5.4e-146 521.2 289 89.6
Aa31LG10G6460 Aethionema arabicum HOM05D004135 ORTHO05D005558 1.6e-145 519.6 293 88.4
BcaB06g28829 Brassica carinata HOM05D004135 ORTHO05D005558 2.0e-145 519.2 293 87.4
Carub.0001s2889 Capsella rubella HOM05D004135 ORTHO05D005558 4.5e-145 518.1 292 86.6
Sed0027064 Sechium edule HOM05D004135 ORTHO05D005558 1.0e-144 516.9 289 88.6
AL1G44690 Arabidopsis lyrata HOM05D004135 ORTHO05D005558 1.3e-144 516.5 292 86.0
Thecc.06G007700 Theobroma cacao HOM05D004135 ORTHO05D005558 2.3e-144 515.8 293 89.1
Thhalv10008349m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 2.9e-144 515.4 293 86.0
AT1G30630 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 5.0e-144 514.6 292 86.0
Duzib235G1539 Durio zibethinus HOM05D004135 ORTHO05D005558 8.6e-144 513.8 290 88.3
Oeu060331.1 Olea europaea HOM05D004135 ORTHO05D005558 1.1e-143 513.5 291 88.3
BraA04t18166Z Brassica rapa HOM05D004135 ORTHO05D005558 1.5e-143 513.1 293 86.3
BcaC02g07752 Brassica carinata HOM05D004135 ORTHO05D005558 2.5e-143 512.3 293 86.3
BolC4t27879H Brassica oleracea HOM05D004135 ORTHO05D005558 3.3e-143 511.9 293 86.3
Duzib160G0522 Durio zibethinus HOM05D004135 ORTHO05D005558 3.3e-143 511.9 290 88.3
Sed0006315 Sechium edule HOM05D004135 ORTHO05D005558 3.3e-143 511.9 290 88.6
C04p64030 Brassica napus HOM05D004135 ORTHO05D005558 5.5e-143 511.1 293 86.0
Thhalv10017028m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 5.5e-143 511.1 290 87.9
BcaC01g05751 Brassica carinata HOM05D004135 ORTHO05D005558 7.2e-143 510.8 293 85.7
A04p26610 Brassica napus HOM05D004135 ORTHO05D005558 7.2e-143 510.8 293 86.0
C03p22580 Brassica napus HOM05D004135 ORTHO05D005558 7.2e-143 510.8 293 85.7
Eucgr.D01026 Eucalyptus grandis HOM05D004135 ORTHO05D005558 7.2e-143 510.8 296 86.5
SalBow8G1631 Salvia bowleyana HOM05D004135 ORTHO05D005558 7.2e-143 510.8 292 87.0
SalBow8G2729 Salvia bowleyana HOM05D004135 ORTHO05D005558 7.2e-143 510.8 292 87.0
CANSAT35G0477 Cannabis sativa HOM05D004135 ORTHO05D005558 1.2e-142 510.0 294 85.0
BolC3t14655H Brassica oleracea HOM05D004135 ORTHO05D005558 1.6e-142 509.6 293 86.0
Prupe.4G101800 Prunus persica HOM05D004135 ORTHO05D005558 2.8e-142 508.8 293 86.7
BraA03t11189Z Brassica rapa HOM05D004135 ORTHO05D005558 3.6e-142 508.4 293 85.0
Gohir.D05G112400 Gossypium hirsutum HOM05D004135 ORTHO05D005558 3.6e-142 508.4 290 87.9
BcaB07g32703 Brassica carinata HOM05D004135 ORTHO05D005558 4.7e-142 508.1 293 84.6
A03p19330 Brassica napus HOM05D004135 ORTHO05D005558 4.7e-142 508.1 293 85.3
AT2G34840 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 6.1e-142 507.7 293 86.0
Gorai.009G116600 Gossypium raimondii HOM05D004135 ORTHO05D005558 8.0e-142 507.3 290 87.9
Hma1.2p1_0300F.1_g117980 Hydrangea macrophylla HOM05D004135 ORTHO05D005558 1.0e-141 506.9 289 86.2
Sp4g17120 Schrenkiella parvula HOM05D004135 ORTHO05D005558 1.0e-141 506.9 293 86.3
CARHR030110 Cardamine hirsuta HOM05D004135 ORTHO05D005558 1.4e-141 506.5 293 84.6
BcaC05g27087 Brassica carinata HOM05D004135 ORTHO05D005558 1.8e-141 506.1 293 84.3
C05p29690 Brassica napus HOM05D004135 ORTHO05D005558 1.8e-141 506.1 293 84.3
BolC5t31698H Brassica oleracea HOM05D004135 ORTHO05D005558 1.8e-141 506.1 293 84.3
Carub.0004s1652 Capsella rubella HOM05D004135 ORTHO05D005558 2.3e-141 505.8 293 85.7
A09p35780 Brassica napus HOM05D004135 ORTHO05D005558 4.0e-141 505.0 293 84.0
BraA09t39101Z Brassica rapa HOM05D004135 ORTHO05D005558 4.0e-141 505.0 293 84.0
Nitab4.5_0012414g0010 Nicotiana tabacum HOM05D004135 ORTHO05D005558 8.9e-141 503.8 291 85.9
Nitab4.5_0001219g0030 Nicotiana tabacum HOM05D004135 ORTHO05D005558 1.2e-140 503.4 291 85.9
MSTRG.7569 Avicennia marina HOM05D004135 ORTHO05D005558 1.5e-140 503.1 292 86.0
GSVIVG01021747001 Vitis vinifera HOM05D004135 ORTHO05D005558 2.6e-140 502.3 289 86.2
Migut.M01941 Erythranthe guttata HOM05D004135 ORTHO05D005558 5.7e-140 501.1 292 86.0
MSTRG.16319 Avicennia marina HOM05D004135 ORTHO05D005558 7.5e-140 500.7 292 86.0
TAR629G2923 Trochodendron aralioides HOM05D004135 ORTHO05D005558 9.8e-140 500.4 289 84.8
CAN.G675.30 Capsicum annuum HOM05D004135 ORTHO05D005558 1.7e-139 499.6 291 85.2
Peaxi162Scf00195g00518 Petunia axillaris HOM05D004135 ORTHO05D005558 1.7e-139 499.6 291 84.9
Nn7g38349 Nelumbo nucifera HOM05D004135 ORTHO05D005558 2.2e-139 499.2 292 85.3
PGR083G2348 Punica granatum HOM05D004135 ORTHO05D005558 1.1e-138 496.9 295 85.1
PSO541G2415 Papaver somniferum HOM05D004135 ORTHO05D005558 1.4e-138 496.5 289 84.4
TAR627G0684 Trochodendron aralioides HOM05D004135 ORTHO05D005558 1.8e-138 496.1 289 84.4
DCAR_003828 Daucus carota HOM05D004135 ORTHO05D005558 5.4e-138 494.6 290 85.2
Lj1A1156T44 Lonicera japonica HOM05D004135 ORTHO05D005558 7.0e-138 494.2 301 82.4
Lj2A337T32 Lonicera japonica HOM05D004135 ORTHO05D005558 9.2e-138 493.8 286 86.4
Solyc02g069585.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 1.6e-137 493.0 291 83.8
PGSC0003DMG400031401 Solanum tuberosum HOM05D004135 ORTHO05D005558 1.6e-137 493.0 291 85.6
PSO675G0864 Papaver somniferum HOM05D004135 ORTHO05D005558 2.0e-137 492.7 289 84.1
Sopen02g018720 Solanum pennellii HOM05D004135 ORTHO05D005558 2.7e-137 492.3 291 83.8
Lsat_1_v5_gn_1_86700 Lactuca sativa HOM05D004135 ORTHO05D005558 3.5e-137 491.9 288 83.7
PGSC0003DMG400021137 Solanum tuberosum HOM05D004135 ORTHO05D005558 4.5e-137 491.5 291 83.8
Sopen02g009560 Solanum pennellii HOM05D004135 ORTHO05D005558 5.9e-137 491.1 291 85.2
HanXRQChr04g0119201 Helianthus annuus HOM05D004135 ORTHO05D005558 7.8e-137 490.7 290 84.5
Sc24g0002580 Simmondsia chinensis HOM05D004135 ORTHO05D005558 7.8e-137 490.7 289 84.4
Nn4g26687 Nelumbo nucifera HOM05D004135 ORTHO05D005558 1.0e-136 490.3 289 83.4
EL10Ac8g19524 Beta vulgaris HOM05D004135 ORTHO05D005558 1.7e-136 489.6 289 83.7
Sabra11G0144000 Salix brachista HOM05D004135 ORTHO05D005558 1.7e-136 489.6 305 83.0
AUR62027344 Chenopodium quinoa HOM05D004135 ORTHO05D005558 3.8e-136 488.4 289 82.4
Solyc02g030243.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 3.8e-136 488.4 291 84.9
SGA_v2.0_scaffold298G47640 Striga asiatica HOM05D004135 ORTHO05D005558 6.6e-136 487.6 327 77.7
CDE02G1412 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 2.5e-135 485.7 289 82.4
unitig_748.g7354 Utricularia gibba HOM05D004135 ORTHO05D005558 2.5e-135 485.7 294 82.0
Aqoxy6G00202 Aquilegia oxysepala HOM05D004135 ORTHO05D005558 9.5e-135 483.8 289 82.4
TWI81G0788 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 9.5e-135 483.8 290 84.5
AUR62042515 Chenopodium quinoa HOM05D004135 ORTHO05D005558 3.6e-134 481.9 289 81.0
Os04g0612600 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 3.6e-134 481.9 289 82.7
ATR0763G246 Amborella trichopoda HOM05D004135 ORTHO05D005558 6.1e-134 481.1 289 80.6
HanXRQChr11g0340901 Helianthus annuus HOM05D004135 ORTHO05D005558 6.1e-134 481.1 288 81.6
Lsat_1_v5_gn_7_31180 Lactuca sativa HOM05D004135 ORTHO05D005558 1.8e-133 479.6 290 83.4
Ah.11g045310 Amaranthus hybridus HOM05D004135 ORTHO05D005558 6.8e-133 477.6 289 80.6
DCAR_007807 Daucus carota HOM05D004135 ORTHO05D005558 6.8e-133 477.6 292 82.9
Lj6g0020585 Lotus japonicus HOM05D004135 ORTHO05D005558 2.6e-132 475.7 289 81.0
Zm00001eb430730 Zea mays HOM05D004135 ORTHO05D005558 2.6e-132 475.7 289 81.3
Ca_00931_v3 Cicer arietinum L. HOM05D004135 ORTHO05D005558 1.7e-131 473.0 289 81.0
Atru.chr6.3256 Acer truncatum HOM05D004135 ORTHO05D005558 2.9e-131 472.2 291 82.1
Glyma.15G136100 Glycine max HOM05D004135 ORTHO05D005558 3.7e-131 471.9 286 80.1
CSS0034299 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D005558 8.3e-131 470.7 301 79.1
HPP92_013200 Vanilla planifolia HOM05D004135 ORTHO05D005558 8.3e-131 470.7 291 80.8
Phvul.006G122500 Phaseolus vulgaris HOM05D004135 ORTHO05D005558 4.1e-130 468.4 286 80.1
Medtr2g032130 Medicago truncatula HOM05D004135 ORTHO05D005558 9.2e-130 467.2 289 79.2
TWI15G0841 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 2.0e-129 466.1 292 81.5
Glyma.09G030400 Glycine max HOM05D004135 ORTHO05D005558 6.0e-129 464.5 286 78.7
vmacro03457 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 2.3e-128 462.6 305 77.7
RcHm_v2.0_Chr5g0018341 Rosa chinensis HOM05D004135 ORTHO05D005558 3.0e-128 462.2 294 80.3
arahy.Tifrunner.gnm1.ann1.CJHC7K Arachis hypogaea HOM05D004135 ORTHO05D005558 3.9e-128 461.8 293 79.2
Lalb_Chr20g0120301 Lupinus albus HOM05D004135 ORTHO05D005558 3.9e-128 461.8 289 79.2
TWI38G0133 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 3.9e-128 461.8 292 80.8
MD05G1263700 Malus domestica HOM05D004135 ORTHO05D005558 5.0e-128 461.5 293 79.5
MBI18_g26296_MAGBIO Magnolia biondii HOM05D004135 ORTHO05D005558 8.9e-125 450.7 308 74.7
Actinidia31378 Actinidia chinensis HOM05D004135 ORTHO05D005558 2.0e-124 449.5 260 86.2
FvH4_3g11400 Fragaria vesca HOM05D004135 ORTHO05D005558 4.4e-124 448.4 293 76.5
vmacro10993 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 3.7e-123 445.3 447 56.8
FAN21G1456 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.1e-122 443.7 297 75.4
FAN16G1287 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.9e-122 443.0 297 75.4
ECA236G2122 Erigeron canadensis HOM05D000091 ORTHO05D001510 3.2e-122 442.2 274 79.6
FAN25G0882 Fragaria x ananassa HOM05D004135 ORTHO05D005558 5.4e-122 441.4 292 76.0
Actinidia32352 Actinidia chinensis HOM05D004135 ORTHO05D005558 2.1e-121 439.5 291 78.7
Haze_08569 Corylus avellana HOM05D004135 ORTHO05D005558 3.5e-121 438.7 310 74.5
Oeu052702.4 Olea europaea HOM05D004135 ORTHO05D005558 3.5e-121 438.7 303 75.6
MD10G1241400 Malus domestica HOM05D004135 ORTHO05D005558 7.8e-121 437.6 292 75.0
VMungo0540G1545 Vigna mungo HOM05D004135 ORTHO05D005558 1.5e-119 433.3 286 75.2
Psat1g164080 Pisum sativum HOM05D004135 ORTHO05D005558 7.5e-116 421.0 255 80.4
Dinv04216 Davidia involucrata HOM05D004135 ORTHO05D005558 8.3e-115 417.5 231 87.9
TPR.G8030 Trifolium pratense HOM05D004135 ORTHO05D005558 9.2e-114 414.1 257 79.8
Zm00001eb432010 Zea mays HOM05D004135 ORTHO05D005558 1.1e-111 407.1 294 70.7
Cc09_g07090 Coffea canephora HOM05D004135 ORTHO05D005558 1.5e-111 406.8 233 85.0
Os04g0644700 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 4.7e-110 401.7 297 68.7
Pp3c27_2170 Physcomitrium patens HOM05D004135 ORTHO05D005558 1.1e-109 400.6 289 67.8
Pp3c6_18240 Physcomitrium patens HOM05D004135 ORTHO05D005558 1.5e-108 396.7 289 67.1
Pp3c16_16890 Physcomitrium patens HOM05D004135 ORTHO05D005558 3.4e-108 395.6 289 67.1
Mapoly0002s0056 Marchantia polymorpha HOM05D004135 ORTHO05D005558 7.1e-106 387.9 286 65.0
arahy.Tifrunner.gnm1.ann1.NB4WMM Arachis hypogaea HOM05D004135 ORTHO05D005558 1.3e-104 383.6 231 81.4
Rhsim02G0165800 Rhododendron simsii HOM05D004135 ORTHO05D005558 1.1e-101 374.0 297 68.0
AagrBONN_evm.TU.Sc2ySwM_117.3836 Anthoceros agrestis HOM05D004135 ORTHO05D005558 4.8e-94 348.6 293 60.4
Actinidia25200 Actinidia chinensis HOM05D004135 ORTHO05D005558 9.3e-90 334.3 203 82.3
COL.COLO4_26892 Corchorus olitorius HOM05D004135 ORTHO05D005558 1.0e-88 330.9 270 67.0
SMO358G0532 Selaginella moellendorffii HOM05D004135 ORTHO05D005558 8.1e-86 321.2 285 58.9
Cre13.g592450 Chlamydomonas reinhardtii HOM05D004135 ORTHO05D005558 1.8e-77 293.5 287 52.3
CBR_g34668 Chara braunii HOM05D004135 ORTHO05D005558 9.3e-74 281.2 290 50.7
CDE06G2577 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 2.6e-68 263.1 163 77.3
PRCOL_00001868 Prasinoderma coloniale HOM05D004135 ORTHO05D005558 4.5e-68 262.3 285 48.8
MCO11G236 Micromonas commoda HOM05D004135 ORTHO05D005558 7.7e-68 261.5 281 47.3
Haze_05958 Corylus avellana HOM05D006556 ORTHO05D008146 2.1e-57 226.9 151 78.1
Zm00001eb274480 Zea mays HOM05D004135 ORTHO05D005558 2.1e-57 226.9 154 70.8
Thecc.06G007200 Theobroma cacao HOM05D004135 ORTHO05D005558 3.6e-57 226.1 113 96.5
COL.COLO4_29004 Corchorus olitorius HOM05D004135 ORTHO05D005558 4.4e-55 219.2 139 82.0
Zm00001eb135420 Zea mays HOM05D004135 ORTHO05D443401 3.3e-26 123.2 82 76.8
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 3.3e-26 123.2 93 73.1
SGA_v2.0_scaffold147G36337 Striga asiatica HOM05D004135 ORTHO05D401852 7.2e-26 122.1 124 54.0
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 3.6e-25 119.8 96 70.8
SGA_v2.0_scaffold147G36336 Striga asiatica HOM05D004135 ORTHO05D000001 2.6e-23 113.6 161 43.5
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 5.7e-23 112.5 93 67.7
Zm00001eb388920 Zea mays HOM05D000787 ORTHO05D001019 1.1e-21 108.2 151 48.3
Zm00001eb180170 Zea mays HOM05D004135 ORTHO05D444922 2.4e-21 107.1 75 72.0
AUR62011277 Chenopodium quinoa HOM05D004135 ORTHO05D138132 1.2e-20 104.8 52 94.2
RcHm_v2.0_Chr6g0289631 Rosa chinensis HOM05D004135 ORTHO05D008146 1.2e-20 104.8 66 77.3
CSS0024113 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D028393 1.5e-18 97.8 57 84.2
RcHm_v2.0_Chr6g0289621 Rosa chinensis HOM05D004135 ORTHO05D028393 1.9e-18 97.4 70 70.0
RcHm_v2.0_Chr0c29g0501101 Rosa chinensis HOM05D004135 ORTHO05D028393 1.7e-14 84.3 58 70.7
RcHm_v2.0_Chr1g0337861 Rosa chinensis HOM05D004135 ORTHO05D028393 1.7e-14 84.3 58 70.7
Zm00001eb297670 Zea mays HOM05D004958 ORTHO05D005983 3.5e-12 76.6 54 75.9
Zm00001eb373640 Zea mays HOM05D004135 ORTHO05D444823 9.5e-10 68.6 96 52.1
VMungo0540G1336 Vigna mungo HOM05D000328 ORTHO05D000191 5.2e-08 62.8 41 65.9
AUR62044460 Chenopodium quinoa HOM05D004135 ORTHO05D137931 8.9e-08 62.0 38 78.9
MD08G1091900 Malus domestica HOM05D004135 ORTHO05D246351 2.2e-06 57.4 37 86.5


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