Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc221.8 Carica papaya HOM05D004199 ORTHO05D005905 4.5e-196 688.0 405 100.0
Duzib235G0865 Durio zibethinus HOM05D004199 ORTHO05D005905 6.5e-70 268.9 358 53.1
CsaV3_5G033970 Cucumis sativus L. HOM05D004199 ORTHO05D005905 1.1e-69 268.1 424 46.2
Prupe.1G305200 Prunus persica HOM05D004199 ORTHO05D005905 4.2e-69 266.2 415 50.1
GSVIVG01011955001 Vitis vinifera HOM05D004199 ORTHO05D005905 7.2e-69 265.4 341 51.9
Gohir.D10G059300 Gossypium hirsutum HOM05D004199 ORTHO05D005905 8.0e-68 261.9 421 48.0
Sed0023765 Sechium edule HOM05D004199 ORTHO05D005905 1.0e-67 261.5 417 46.5
MELO3C012214.2 Cucumis melo HOM05D004199 ORTHO05D005905 1.4e-67 261.2 429 46.2
Gorai.011G063300 Gossypium raimondii HOM05D004199 ORTHO05D005905 1.4e-67 261.2 421 47.7
Gohir.A10G057500 Gossypium hirsutum HOM05D004199 ORTHO05D005905 4.0e-67 259.6 342 51.2
Eucgr.G02350 Eucalyptus grandis HOM05D004199 ORTHO05D005905 6.8e-67 258.8 431 45.5
ClCG05G023030 Citrullus lanatus HOM05D004199 ORTHO05D005905 8.8e-67 258.5 426 47.7
MD13G1046700 Malus domestica HOM05D004199 ORTHO05D005905 8.8e-67 258.5 348 50.0
COL.COLO4_31201 Corchorus olitorius HOM05D004199 ORTHO05D005905 3.4e-66 256.5 339 51.3
Eucgr.K00868 Eucalyptus grandis HOM05D004199 ORTHO05D005905 2.8e-65 253.4 424 44.1
Nn6g35106 Nelumbo nucifera HOM05D004199 ORTHO05D005905 9.1e-64 248.4 333 49.2
VMungo1383G0908 Vigna mungo HOM05D004199 ORTHO05D005905 9.1e-64 248.4 412 45.9
RcHm_v2.0_Chr4g0435851 Rosa chinensis HOM05D004199 ORTHO05D005905 2.0e-63 247.3 427 46.8
QL01p046262 Quercus lobata HOM05D004199 ORTHO05D005905 3.5e-63 246.5 326 51.5
THA.LOC104800384 Tarenaya hassleriana HOM05D004199 ORTHO05D005905 3.5e-63 246.5 338 49.4
Dinv05796 Davidia involucrata HOM05D004199 ORTHO05D005905 7.7e-63 245.4 331 50.2
Lj6A766T32 Lonicera japonica HOM05D004199 ORTHO05D005905 1.0e-62 245.0 332 50.9
CSS0043668 Camellia sinensis var. sinensis HOM05D004199 ORTHO05D005905 1.7e-62 244.2 331 49.8
Hma1.2p1_0399F.1_g144220 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 4.2e-61 239.6 324 51.5
TAR623G0314 Trochodendron aralioides HOM05D004199 ORTHO05D005905 4.2e-61 239.6 331 48.3
Manes.04G160500 Manihot esculenta HOM05D004199 ORTHO05D005905 2.1e-60 237.3 355 47.3
AT5G08550 Arabidopsis thaliana HOM05D004199 ORTHO05D005905 2.8e-60 236.9 417 44.6
Sc17g0004690 Simmondsia chinensis HOM05D004199 ORTHO05D005905 4.7e-60 236.1 358 48.3
MD16G1048400 Malus domestica HOM05D004199 ORTHO05D005905 6.1e-60 235.7 325 50.2
AL6G19260 Arabidopsis lyrata HOM05D004199 ORTHO05D005905 1.0e-59 235.0 419 48.0
Glyma.07G227400 Glycine max HOM05D004199 ORTHO05D005905 1.0e-59 235.0 414 45.4
Ca_25946_v3 Cicer arietinum L. HOM05D004199 ORTHO05D005905 1.8e-59 234.2 332 52.7
Aa31LG3G17980 Aethionema arabicum HOM05D004199 ORTHO05D005905 2.3e-59 233.8 343 49.0
Oeu041360.1 Olea europaea HOM05D004199 ORTHO05D005905 2.3e-59 233.8 427 42.2
EL10Ac9g22638 Beta vulgaris HOM05D004199 ORTHO05D005905 6.8e-59 232.3 417 43.2
CARHR204430 Cardamine hirsuta HOM05D004199 ORTHO05D005905 6.8e-59 232.3 417 42.9
Cc11_g10620 Coffea canephora HOM05D004199 ORTHO05D005905 8.9e-59 231.9 360 47.2
CANSAT56G2350 Cannabis sativa HOM05D004199 ORTHO05D005905 2.6e-58 230.3 348 48.9
Carub.0006s0751 Capsella rubella HOM05D004199 ORTHO05D005905 4.4e-58 229.6 422 45.7
Phvul.001G030200 Phaseolus vulgaris HOM05D004199 ORTHO05D005905 4.4e-58 229.6 406 44.3
FvH4_4g28100 Fragaria vesca HOM05D004199 ORTHO05D005905 7.5e-58 228.8 326 49.1
Glyma.20G028100 Glycine max HOM05D004199 ORTHO05D005905 1.3e-57 228.0 331 49.8
Psat2g189000 Pisum sativum HOM05D004199 ORTHO05D005905 1.3e-57 228.0 422 43.6
Migut.E00297 Erythranthe guttata HOM05D004199 ORTHO05D005905 6.3e-57 225.7 414 45.9
Lalb_Chr10g0099721 Lupinus albus HOM05D004199 ORTHO05D005905 6.3e-57 225.7 331 48.3
FAN22G1977 Fragaria x ananassa HOM05D004199 ORTHO05D005905 1.4e-56 224.6 328 46.0
Thecc.10G125100 Theobroma cacao HOM05D004199 ORTHO05D005905 1.4e-56 224.6 351 50.1
Actinidia13675 Actinidia chinensis HOM05D004199 ORTHO05D005905 1.8e-56 224.2 420 42.1
FAN12G0509 Fragaria x ananassa HOM05D004199 ORTHO05D005905 1.8e-56 224.2 325 49.2
Ciclev10014191m.g Citrus clementina HOM05D004199 ORTHO05D005905 5.4e-56 222.6 338 46.4
Cfa018630 Carpinus fangiana HOM05D004199 ORTHO05D005905 1.6e-55 221.1 420 46.2
CiPaw.16G003100 Carya illinoinensis HOM05D004199 ORTHO05D005905 1.6e-55 221.1 331 48.9
FAN07G1167 Fragaria x ananassa HOM05D004199 ORTHO05D005905 1.6e-55 221.1 414 44.0
Lsat_1_v5_gn_4_1641 Lactuca sativa HOM05D004199 ORTHO05D005905 4.5e-55 219.5 342 46.2
Lj3g0002767 Lotus japonicus HOM05D004199 ORTHO05D005905 2.3e-54 217.2 345 49.6
MBI01_g12859_MAGBIO Magnolia biondii HOM05D004199 ORTHO05D005905 2.9e-54 216.9 338 46.7
Haze_17439 Corylus avellana HOM05D004199 ORTHO05D005905 3.8e-54 216.5 431 47.3
Hma1.2p1_2265F.1_g318400 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 5.0e-54 216.1 324 48.1
FAN17G3109 Fragaria x ananassa HOM05D004199 ORTHO05D005905 6.6e-54 215.7 321 48.9
Glyma.07G155300 Glycine max HOM05D004199 ORTHO05D005905 6.6e-54 215.7 424 43.9
A10p28170 Brassica napus HOM05D004199 ORTHO05D005905 2.5e-53 213.8 408 41.7
BraA10t44866Z Brassica rapa HOM05D004199 ORTHO05D005905 2.5e-53 213.8 408 41.7
arahy.Tifrunner.gnm1.ann1.9AQU5H Arachis hypogaea HOM05D004199 ORTHO05D005905 4.3e-53 213.0 425 47.1
arahy.Tifrunner.gnm1.ann1.P5TZTU Arachis hypogaea HOM05D004199 ORTHO05D005905 4.3e-53 213.0 425 47.1
EL10Ac8g19592 Beta vulgaris HOM05D004199 ORTHO05D005905 4.3e-53 213.0 394 45.4
Hma1.2p1_0592F.1_g185323 Hydrangea macrophylla HOM05D004199 ORTHO05D005905 5.6e-53 212.6 327 48.0
C09p68380 Brassica napus HOM05D004199 ORTHO05D005905 7.3e-53 212.2 412 41.5
BolC9t59585H Brassica oleracea HOM05D004199 ORTHO05D005905 7.3e-53 212.2 412 42.5
AUR62044199 Chenopodium quinoa HOM05D004199 ORTHO05D005905 7.3e-53 212.2 420 43.1
Ah.04g153070 Amaranthus hybridus HOM05D004199 ORTHO05D005905 1.6e-52 211.1 422 41.0
PGSC0003DMG400000826 Solanum tuberosum HOM05D004199 ORTHO05D005905 2.8e-52 210.3 347 47.3
BcaB08g37246 Brassica carinata HOM05D004199 ORTHO05D005905 3.6e-52 209.9 424 41.3
AUR62033048 Chenopodium quinoa HOM05D004199 ORTHO05D005905 4.7e-52 209.5 338 45.3
Sopen05g005660 Solanum pennellii HOM05D004199 ORTHO05D005905 4.7e-52 209.5 349 47.0
Sp6g34340 Schrenkiella parvula HOM05D004199 ORTHO05D005905 8.0e-52 208.8 420 45.5
Medtr5g007520 Medicago truncatula HOM05D004199 ORTHO05D005905 1.0e-51 208.4 310 46.5
HanXRQChr17g0568011 Helianthus annuus HOM05D004199 ORTHO05D005905 1.8e-51 207.6 335 46.0
SGA_v2.0_scaffold14G06820 Striga asiatica HOM05D004199 ORTHO05D005905 2.3e-51 207.2 422 41.0
Thhalv10012615m.g Eutrema salsugineum HOM05D004199 ORTHO05D005905 3.1e-51 206.8 413 47.5
Rhsim03G0238800 Rhododendron simsii HOM05D004199 ORTHO05D005905 4.0e-51 206.5 305 47.9
DCAR_030084 Daucus carota HOM05D004199 ORTHO05D005905 2.6e-50 203.8 317 44.5
Atru.chr6.1864_Atru.chr6.1865 Acer truncatum HOM05D004199 ORTHO05D005905 9.8e-50 201.8 304 47.4
unitig_22.g6876 Utricularia gibba HOM05D004199 ORTHO05D005905 9.8e-50 201.8 432 40.7
TWI53G1601 Tripterygium wilfordii HOM05D004199 ORTHO05D005905 1.2e-47 194.9 307 45.0
BolC3t12974H Brassica oleracea HOM05D004199 ORTHO05D005905 2.7e-47 193.7 407 41.0
Aqoxy2G01512 Aquilegia oxysepala HOM05D004199 ORTHO05D005905 4.6e-47 193.0 324 45.4
Peaxi162Scf00102g00927 Petunia axillaris HOM05D004199 ORTHO05D005905 6.0e-47 192.6 323 44.0
C03p04430 Brassica napus HOM05D004199 ORTHO05D005905 7.8e-47 192.2 407 40.8
CAN.G184.89 Capsicum annuum HOM05D004199 ORTHO05D005905 5.0e-46 189.5 341 42.5
vmacro14411 Vaccinium macrocarpon HOM05D004199 ORTHO05D005905 1.5e-45 188.0 301 43.9
BraA03t09739Z Brassica rapa HOM05D004199 ORTHO05D005905 4.3e-45 186.4 405 40.7
PSO339G4136 Papaver somniferum HOM05D004199 ORTHO05D005905 1.2e-44 184.9 335 43.0
A03p03960 Brassica napus HOM05D004199 ORTHO05D005905 1.6e-44 184.5 409 39.6
CDE05G0525 Ceratophyllum demersum HOM05D004199 ORTHO05D005905 3.6e-44 183.3 345 42.9
CDE01G0057 Ceratophyllum demersum HOM05D004199 ORTHO05D005905 1.2e-42 178.3 413 39.2
Nitab4.5_0004122g0060 Nicotiana tabacum HOM05D004199 ORTHO05D005905 1.2e-42 178.3 346 41.9
HPP92_022758 Vanilla planifolia HOM05D004199 ORTHO05D005905 9.8e-42 175.3 412 37.6
Nitab4.5_0011513g0020 Nicotiana tabacum HOM05D004199 ORTHO05D005905 1.3e-41 174.9 423 38.1
ATR0665G261 Amborella trichopoda HOM05D004199 ORTHO05D005905 4.1e-40 169.9 431 37.4
Sabra08G0000600 Salix brachista HOM05D004199 ORTHO05D005905 5.4e-40 169.5 364 42.0
PSO801G0529 Papaver somniferum HOM05D004199 ORTHO05D005905 9.2e-40 168.7 347 42.4
Potri.008G002600 Populus trichocarpa HOM05D004199 ORTHO05D005905 2.1e-39 167.5 358 41.3
TPR.G37944 Trifolium pratense HOM05D004199 ORTHO05D005905 4.6e-39 166.4 256 48.0
BcaB01g05585 Brassica carinata HOM05D004199 ORTHO05D005905 6.6e-38 162.5 417 43.6
ECA234G0057 Erigeron canadensis HOM05D004199 ORTHO05D005905 7.3e-37 159.1 327 40.4
Lalb_Chr04g0254951 Lupinus albus HOM05D004199 ORTHO05D005905 3.1e-35 153.7 418 35.4
SEGI_39962 Sequoiadendron giganteum HOM05D004199 ORTHO05D005905 1.6e-31 141.4 428 36.0
Zm00001eb064800 Zea mays HOM05D004199 ORTHO05D005905 3.6e-28 130.2 361 35.7
AagrBONN_evm.TU.Sc2ySwM_228.4147 Anthoceros agrestis HOM05D004199 ORTHO05D005905 8.1e-28 129.0 370 35.1
AagrBONN_evm.TU.Sc2ySwM_368.435 Anthoceros agrestis HOM05D004199 ORTHO05D005905 2.0e-26 124.4 364 35.2
Mapoly0131s0026 Marchantia polymorpha HOM05D004199 ORTHO05D005905 6.6e-22 109.4 371 33.2
Os03g0853700 Oryza sativa ssp. japonica HOM05D004199 ORTHO05D005905 1.8e-19 101.3 456 29.6
Actinidia38395 Actinidia chinensis HOM05D004199 ORTHO05D005905 2.0e-18 97.8 168 44.6
Pp3c5_20240 Physcomitrium patens HOM05D004199 ORTHO05D005905 2.6e-18 97.4 357 30.8
Aqoxy6G00799 Aquilegia oxysepala HOM05D004199 ORTHO05D005905 9.9e-18 95.5 314 29.6
SMO259G0010 Selaginella moellendorffii HOM05D004199 ORTHO05D005905 5.6e-13 79.7 317 32.8
Zm00001eb381810 Zea mays HOM05D004199 ORTHO05D005905 3.5e-07 60.5 95 38.9
Zm00001eb177730 Zea mays HOM05D004199 ORTHO05D005905 7.9e-07 59.3 95 37.9


User provided reference genes

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