Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc22.4 Carica papaya HOM05D005846 ORTHO05D007369 5.6e-72 274.2 145 100.0
QL04p035021 Quercus lobata HOM05D005846 ORTHO05D007369 3.9e-25 118.6 74 79.7
Cfa011122 Carpinus fangiana HOM05D005846 ORTHO05D007369 5.1e-25 118.2 63 90.5
Potri.014G057000 Populus trichocarpa HOM05D005846 ORTHO05D007369 8.7e-25 117.5 63 88.9
Haze_02742 Corylus avellana HOM05D005846 ORTHO05D007369 1.5e-24 116.7 62 90.3
CiPaw.06G031700 Carya illinoinensis HOM05D005846 ORTHO05D007369 1.9e-24 116.3 107 58.9
GSVIVG01018216001 Vitis vinifera HOM05D005846 ORTHO05D007369 1.9e-24 116.3 63 90.5
ECA236G0469 Erigeron canadensis HOM05D005846 ORTHO05D007369 3.3e-24 115.5 63 90.5
MELO3C022237.2 Cucumis melo HOM05D005846 ORTHO05D007369 4.3e-24 115.2 123 56.1
Dinv44098 Davidia involucrata HOM05D005846 ORTHO05D007369 5.6e-24 114.8 107 58.9
ClCG06G002930 Citrullus lanatus HOM05D005846 ORTHO05D007369 9.6e-24 114.0 119 56.3
Nitab4.5_0003110g0060 Nicotiana tabacum HOM05D005846 ORTHO05D007369 1.3e-23 113.6 63 90.5
Sed0022623 Sechium edule HOM05D005846 ORTHO05D007369 1.3e-23 113.6 119 56.3
CsaV3_6G009050 Cucumis sativus L. HOM05D005846 ORTHO05D007369 1.6e-23 113.2 119 56.3
HanXRQChr06g0168821 Helianthus annuus HOM05D005846 ORTHO05D007369 1.6e-23 113.2 107 57.9
Lj9C561G11 Lonicera japonica HOM05D005846 ORTHO05D007369 1.6e-23 113.2 113 54.9
MD07G1110700 Malus domestica HOM05D005846 ORTHO05D007369 1.6e-23 113.2 63 88.9
PGR004G1251 Punica granatum HOM05D005846 ORTHO05D007369 1.6e-23 113.2 107 58.9
Rhsim02G0216700 Rhododendron simsii HOM05D005846 ORTHO05D007369 1.6e-23 113.2 63 85.7
Sabra14G0041600 Salix brachista HOM05D002053 ORTHO05D002135 1.6e-23 113.2 107 57.9
Prupe.2G134200 Prunus persica HOM05D005846 ORTHO05D007369 2.1e-23 112.8 63 87.3
vmacro13469 Vaccinium macrocarpon HOM05D005846 ORTHO05D007369 2.8e-23 112.5 63 85.7
ATR0559G037 Amborella trichopoda HOM05D005846 ORTHO05D007369 3.7e-23 112.1 124 54.0
Aqoxy5G03824 Aquilegia oxysepala HOM05D005846 ORTHO05D007369 3.7e-23 112.1 107 57.9
COL.COLO4_35176 Corchorus olitorius HOM05D005846 ORTHO05D007369 3.7e-23 112.1 74 75.7
Nitab4.5_0001823g0090 Nicotiana tabacum HOM05D005846 ORTHO05D007369 3.7e-23 112.1 62 90.3
SGA_v2.0_scaffold52G19202 Striga asiatica HOM05D005846 ORTHO05D007369 3.7e-23 112.1 74 77.0
TWI14G0811 Tripterygium wilfordii HOM05D005846 ORTHO05D007369 3.7e-23 112.1 63 84.1
Eucgr.D02512 Eucalyptus grandis HOM05D005846 ORTHO05D007369 4.8e-23 111.7 63 82.5
Aa31LG1G26590 Aethionema arabicum HOM05D005846 ORTHO05D007369 6.2e-23 111.3 107 57.9
AL4G44100 Arabidopsis lyrata HOM05D005846 ORTHO05D007369 6.2e-23 111.3 74 74.3
AT2G45000 Arabidopsis thaliana HOM05D005846 ORTHO05D007369 6.2e-23 111.3 74 74.3
Carub.0004s2760 Capsella rubella HOM05D005846 ORTHO05D007369 6.2e-23 111.3 74 74.3
MBI05_g14240_MAGBIO Magnolia biondii HOM05D005846 ORTHO05D007369 6.2e-23 111.3 113 54.0
THA.LOC104802481 Tarenaya hassleriana HOM05D005846 ORTHO05D007369 6.2e-23 111.3 63 85.7
arahy.Tifrunner.gnm1.ann1.DPE9LE Arachis hypogaea HOM05D005846 ORTHO05D007369 8.2e-23 110.9 63 82.5
arahy.Tifrunner.gnm1.ann1.SA9NP4 Arachis hypogaea HOM05D005846 ORTHO05D007369 8.2e-23 110.9 63 82.5
Thhalv10001339m.g Eutrema salsugineum HOM05D005846 ORTHO05D007369 8.2e-23 110.9 74 73.0
HanXRQChr04g0123471 Helianthus annuus HOM05D005846 ORTHO05D007369 8.2e-23 110.9 64 82.8
Sp4g27070 Schrenkiella parvula HOM05D005846 ORTHO05D007369 8.2e-23 110.9 74 73.0
MSTRG.28219 Avicennia marina HOM05D005846 ORTHO05D007369 1.1e-22 110.5 63 85.7
BcaC02g12270 Brassica carinata HOM05D005846 ORTHO05D007369 1.1e-22 110.5 74 73.0
CAN.G899.26 Capsicum annuum HOM05D005846 ORTHO05D007369 1.1e-22 110.5 107 57.9
Thecc.01G387400 Theobroma cacao HOM05D005846 ORTHO05D007369 1.1e-22 110.5 63 84.1
Peaxi162Scf00377g00722 Petunia axillaris HOM05D005846 ORTHO05D007369 1.4e-22 110.2 107 58.9
DCAR_031886 Daucus carota HOM05D005846 ORTHO05D007369 1.8e-22 109.8 120 55.0
TAR375G0515 Trochodendron aralioides HOM05D005846 ORTHO05D007369 1.8e-22 109.8 110 56.4
CANSAT21G1379 Cannabis sativa HOM05D005846 ORTHO05D007369 2.4e-22 109.4 63 82.5
CARHR140260 Cardamine hirsuta HOM05D005846 ORTHO05D007369 2.4e-22 109.4 63 84.1
Phvul.007G143350 Phaseolus vulgaris HOM05D005846 ORTHO05D007369 2.4e-22 109.4 74 68.9
VMungo1383G2837 Vigna mungo HOM05D005846 ORTHO05D007369 2.4e-22 109.4 63 79.4
CSS0006984 Camellia sinensis var. sinensis HOM05D005846 ORTHO05D007369 3.1e-22 109.0 63 85.7
CSS0013945 Camellia sinensis var. sinensis HOM05D005846 ORTHO05D007369 3.1e-22 109.0 63 85.7
FvH4_7g10470 Fragaria vesca HOM05D005846 ORTHO05D007369 3.1e-22 109.0 69 75.4
PSO675G5996 Papaver somniferum HOM05D005846 ORTHO05D007369 3.1e-22 109.0 107 57.9
CDE04G1707 Ceratophyllum demersum HOM05D005846 ORTHO05D007369 4.0e-22 108.6 63 84.1
Cc02_g24740 Coffea canephora HOM05D005846 ORTHO05D007369 4.0e-22 108.6 118 53.4
Duzib116G0440 Durio zibethinus HOM05D005846 ORTHO05D007369 4.0e-22 108.6 63 81.0
Ciclev10019079m.g Citrus clementina HOM05D005846 ORTHO05D007369 5.3e-22 108.2 63 84.1
FAN01G1706 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.3e-22 108.2 63 81.0
FAN03G1473 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.3e-22 108.2 63 81.0
FAN06G0321 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.3e-22 108.2 63 81.0
FAN10G4209 Fragaria x ananassa HOM05D005846 ORTHO05D007369 5.3e-22 108.2 63 81.0
Gohir.D11G145600 Gossypium hirsutum HOM05D005846 ORTHO05D007369 5.3e-22 108.2 63 82.5
Gorai.007G156100 Gossypium raimondii HOM05D005846 ORTHO05D007369 5.3e-22 108.2 63 82.5
Ah.05g173450 Amaranthus hybridus HOM05D005846 ORTHO05D007369 9.0e-22 107.5 63 84.1
C04p05950 Brassica napus HOM05D005846 ORTHO05D007369 9.0e-22 107.5 74 71.6
BolC4t22226H Brassica oleracea HOM05D005846 ORTHO05D007369 9.0e-22 107.5 74 71.6
Medtr7g045280 Medicago truncatula HOM05D005846 ORTHO05D007369 9.0e-22 107.5 74 70.3
Nn6g33892 Nelumbo nucifera HOM05D005846 ORTHO05D007369 9.0e-22 107.5 61 85.2
RcHm_v2.0_Chr1g0348261 Rosa chinensis HOM05D005846 ORTHO05D007369 9.0e-22 107.5 120 53.3
Solyc01g090670.3 Solanum lycopersicum HOM05D005846 ORTHO05D007369 9.0e-22 107.5 106 58.5
Sopen01g036400 Solanum pennellii HOM05D005846 ORTHO05D007369 9.0e-22 107.5 106 58.5
Manes.05G051500 Manihot esculenta HOM05D005846 ORTHO05D007369 1.2e-21 107.1 63 81.0
Psat3g158120 Pisum sativum HOM05D005846 ORTHO05D007369 1.2e-21 107.1 63 81.0
TPR.G39153 Trifolium pratense HOM05D005846 ORTHO05D007369 1.2e-21 107.1 63 81.0
A05p05100 Brassica napus HOM05D005846 ORTHO05D007369 1.5e-21 106.7 118 50.8
BraA05t19484Z Brassica rapa HOM05D005846 ORTHO05D007369 1.5e-21 106.7 118 50.8
PSO541G5798 Papaver somniferum HOM05D005846 ORTHO05D007369 1.5e-21 106.7 107 57.0
Atru.chr5.198 Acer truncatum HOM05D002424 ORTHO05D002640 2.0e-21 106.3 63 79.4
Lj1g0009878 Lotus japonicus HOM05D005846 ORTHO05D007369 2.0e-21 106.3 74 68.9
Atru.chr5.196 Acer truncatum HOM05D005846 ORTHO05D007369 2.6e-21 105.9 63 79.4
arahy.Tifrunner.gnm1.ann1.2XVX2B Arachis hypogaea HOM05D005846 ORTHO05D007369 2.6e-21 105.9 62 79.0
CDE02G2440 Ceratophyllum demersum HOM05D005846 ORTHO05D007369 2.6e-21 105.9 110 53.6
Hund27391 Selenicereus undatus HOM05D005846 ORTHO05D007369 2.6e-21 105.9 63 81.0
Actinidia22778 Actinidia chinensis HOM05D005846 ORTHO05D007369 3.4e-21 105.5 118 51.7
Actinidia22833 Actinidia chinensis HOM05D005846 ORTHO05D007369 3.4e-21 105.5 118 51.7
FAN06G3163 Fragaria x ananassa HOM05D005846 ORTHO05D007369 3.4e-21 105.5 63 79.4
FAN10G1341 Fragaria x ananassa HOM05D005846 ORTHO05D007369 3.4e-21 105.5 63 79.4
AUR62013700 Chenopodium quinoa HOM05D005846 ORTHO05D007369 5.8e-21 104.8 63 81.0
Oeu061505.1 Olea europaea HOM05D005846 ORTHO05D007369 5.8e-21 104.8 106 54.7
Lsat_1_v5_gn_7_11161 Lactuca sativa HOM05D005846 ORTHO05D007369 7.6e-21 104.4 111 55.0
Lalb_Chr19g0126671 Lupinus albus HOM05D005846 ORTHO05D007369 7.6e-21 104.4 63 76.2
Ca_26287_v3 Cicer arietinum L. HOM05D005846 ORTHO05D007369 1.3e-20 103.6 63 77.8
Migut.B01566 Erythranthe guttata HOM05D005846 ORTHO05D007369 1.3e-20 103.6 107 55.1
Gohir.A11G139400 Gossypium hirsutum HOM05D005846 ORTHO05D007369 1.3e-20 103.6 107 53.3
Glyma.01G074700 Glycine max HOM05D005846 ORTHO05D007369 1.7e-20 103.2 107 52.3
Glyma.11G162365 Glycine max HOM05D005846 ORTHO05D007369 2.2e-20 102.8 107 51.4
AUR62004139 Chenopodium quinoa HOM05D005846 ORTHO05D007369 2.9e-20 102.4 101 57.4
EL10Ac1g00809 Beta vulgaris HOM05D005846 ORTHO05D007369 4.9e-20 101.7 63 79.4
Lsat_1_v5_gn_4_126501 Lactuca sativa HOM05D005846 ORTHO05D007369 3.2e-19 99.0 67 74.6
unitig_26.g8879 Utricularia gibba HOM05D005846 ORTHO05D007369 5.5e-19 98.2 107 52.3
Zm00001eb367060 Zea mays HOM05D005846 ORTHO05D007369 1.2e-18 97.1 106 51.9
Os01g0856600 Oryza sativa ssp. japonica HOM05D005846 ORTHO05D007369 1.3e-17 93.6 65 70.8
QL04p035108 Quercus lobata HOM05D005846 ORTHO05D007369 1.3e-17 93.6 50 92.0
HPP92_002750 Vanilla planifolia HOM05D005846 ORTHO05D007369 2.3e-17 92.8 63 69.8
HPP92_027757 Vanilla planifolia HOM05D005846 ORTHO05D007369 2.3e-17 92.8 63 69.8
Pp3c15_14630 Physcomitrium patens HOM05D005846 ORTHO05D007369 1.9e-16 89.7 124 44.4
QL04p035237 Quercus lobata HOM05D005846 ORTHO05D007369 4.3e-16 88.6 50 88.0
AagrBONN_evm.TU.Sc2ySwM_117.1077 Anthoceros agrestis HOM05D005846 ORTHO05D007369 2.8e-15 85.9 125 40.0
Mapoly0005s0221 Marchantia polymorpha HOM05D005846 ORTHO05D007369 2.8e-15 85.9 124 41.1
PGR004G1857 Punica granatum HOM05D005846 ORTHO05D007369 6.7e-09 64.7 38 78.9
HanXRQChr12g0366671 Helianthus annuus HOM05D005846 ORTHO05D007369 8.8e-09 64.3 44 70.5
HanXRQChr02g0053971 Helianthus annuus HOM05D005846 ORTHO05D000176 2.5e-08 62.8 111 39.6
HanXRQChr16g0530801 Helianthus annuus HOM05D005846 ORTHO05D007369 2.5e-08 62.8 44 68.2
CBR_g21126 Chara braunii HOM05D005846 ORTHO05D007369 3.3e-08 62.4 117 38.5
HanXRQChr01g0009681 Helianthus annuus HOM05D005846 ORTHO05D007369 6.3e-07 58.2 44 63.6
HPP92_006013 Vanilla planifolia HOM05D005846 ORTHO05D007369 5.3e-06 55.1 72 43.1


User provided reference genes

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