Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc2198.1 Carica papaya HOM05D004619 ORTHO05D005738 2.0e-124 449.1 226 100.0
QL12p041325 Quercus lobata HOM05D004619 ORTHO05D005738 3.5e-105 385.2 225 85.8
Atru.chr7.2086 Acer truncatum HOM05D004619 ORTHO05D005738 2.3e-104 382.5 225 82.7
COL.COLO4_20972 Corchorus olitorius HOM05D004619 ORTHO05D005738 2.3e-104 382.5 226 83.6
CSS0016966 Camellia sinensis var. sinensis HOM05D004619 ORTHO05D005738 1.1e-103 380.2 226 83.6
CSS0048446 Camellia sinensis var. sinensis HOM05D004619 ORTHO05D005738 1.1e-103 380.2 226 83.6
Prupe.1G448000 Prunus persica HOM05D004619 ORTHO05D005738 1.1e-103 380.2 226 82.7
Gohir.D06G092300 Gossypium hirsutum HOM05D004619 ORTHO05D005738 7.3e-103 377.5 226 82.7
Duzib168G0872 Durio zibethinus HOM05D004619 ORTHO05D005738 9.5e-103 377.1 226 82.7
Gorai.010G106300 Gossypium raimondii HOM05D004619 ORTHO05D005738 1.2e-102 376.7 226 82.7
MD15G1093200 Malus domestica HOM05D004619 ORTHO05D005738 1.2e-102 376.7 226 82.3
Gohir.A06G092700 Gossypium hirsutum HOM05D004619 ORTHO05D005738 1.6e-102 376.3 226 82.7
Ciclev10007610m.g Citrus clementina HOM05D004619 ORTHO05D005738 2.1e-102 375.9 225 82.2
Nn8g39783 Nelumbo nucifera HOM05D004619 ORTHO05D005738 4.7e-102 374.8 226 81.0
Lj8A581G22 Lonicera japonica HOM05D004619 ORTHO05D005738 8.1e-102 374.0 226 81.9
FvH4_2g35520 Fragaria vesca HOM05D004619 ORTHO05D005738 1.4e-101 373.2 226 81.9
FAN27G0819 Fragaria x ananassa HOM05D004619 ORTHO05D005738 1.4e-101 373.2 226 81.9
GSVIVG01035621001 Vitis vinifera HOM05D004619 ORTHO05D005738 1.4e-101 373.2 226 81.9
Cfa013367 Carpinus fangiana HOM05D004619 ORTHO05D005738 1.8e-101 372.9 225 81.3
Eucgr.C00596 Eucalyptus grandis HOM05D004619 ORTHO05D005738 5.2e-101 371.3 226 81.4
CANSAT25G1337 Cannabis sativa HOM05D004619 ORTHO05D005738 6.8e-101 370.9 226 81.9
CiPaw.07G204000 Carya illinoinensis HOM05D004619 ORTHO05D005738 8.9e-101 370.5 226 82.3
Thecc.09G045500 Theobroma cacao HOM05D004619 ORTHO05D005738 2.6e-100 369.0 226 80.5
ECA233G0099 Erigeron canadensis HOM05D004619 ORTHO05D005738 5.8e-100 367.9 226 79.6
Dinv27905 Davidia involucrata HOM05D004619 ORTHO05D005738 7.5e-100 367.5 226 80.5
HanXRQChr13g0402061 Helianthus annuus HOM05D004619 ORTHO05D005738 9.8e-100 367.1 226 79.6
RcHm_v2.0_Chr6g0306261 Rosa chinensis HOM05D004619 ORTHO05D005738 9.8e-100 367.1 226 80.5
Hma1.2p1_0049F.1_g028570 Hydrangea macrophylla HOM05D004619 ORTHO05D005738 1.7e-99 366.3 225 79.6
Actinidia15739 Actinidia chinensis HOM05D004619 ORTHO05D005738 2.2e-99 365.9 226 80.5
DCAR_004468 Daucus carota HOM05D004619 ORTHO05D005738 1.9e-98 362.8 226 79.6
EL10Ac2g04016 Beta vulgaris HOM05D004619 ORTHO05D005738 3.2e-98 362.1 225 78.2
Haze_21890 Corylus avellana HOM05D004619 ORTHO05D005738 7.1e-98 360.9 225 80.4
FAN20G0141 Fragaria x ananassa HOM05D004619 ORTHO05D005738 2.7e-97 359.0 226 80.1
Lsat_1_v5_gn_6_23120 Lactuca sativa HOM05D004619 ORTHO05D005738 1.3e-96 356.7 226 76.5
Aqoxy7G03899 Aquilegia oxysepala HOM05D004619 ORTHO05D005738 1.7e-96 356.3 226 78.3
MBI01_g18389_MAGBIO Magnolia biondii HOM05D004619 ORTHO05D005738 1.7e-96 356.3 226 75.7
Nitab4.5_0001515g0010 Nicotiana tabacum HOM05D004619 ORTHO05D005738 3.9e-96 355.1 226 77.0
Sc23g0005210 Simmondsia chinensis HOM05D004619 ORTHO05D005738 3.9e-96 355.1 225 77.3
arahy.Tifrunner.gnm1.ann1.Z9IJD2 Arachis hypogaea HOM05D004619 ORTHO05D005738 5.1e-96 354.8 226 77.9
Lalb_Chr14g0362511 Lupinus albus HOM05D004619 ORTHO05D005738 5.1e-96 354.8 226 76.1
Nitab4.5_0003794g0010 Nicotiana tabacum HOM05D004619 ORTHO05D005738 5.1e-96 354.8 226 77.4
Sopen08g020420 Solanum pennellii HOM05D004619 ORTHO05D005738 8.6e-96 354.0 224 78.6
arahy.Tifrunner.gnm1.ann1.CES4LM Arachis hypogaea HOM05D004619 ORTHO05D005738 1.1e-95 353.6 226 77.9
PSO210G5473 Papaver somniferum HOM05D004619 ORTHO05D005738 1.1e-95 353.6 226 75.2
TPR.G24498 Trifolium pratense HOM05D004619 ORTHO05D005738 1.1e-95 353.6 226 77.4
Sabra18G0044200 Salix brachista HOM05D004619 ORTHO05D005738 1.5e-95 353.2 225 79.1
Solyc08g066580.4 Solanum lycopersicum HOM05D004619 ORTHO05D005738 1.9e-95 352.8 224 78.1
AUR62039705 Chenopodium quinoa HOM05D004619 ORTHO05D005738 2.5e-95 352.4 225 76.0
AUR62009276 Chenopodium quinoa HOM05D004619 ORTHO05D005738 4.3e-95 351.7 225 76.0
Medtr1g006690 Medicago truncatula HOM05D004619 ORTHO05D005738 5.6e-95 351.3 226 76.5
CAN.G400.8 Capsicum annuum HOM05D004619 ORTHO05D005738 1.2e-94 350.1 226 77.9
PSO210G6185 Papaver somniferum HOM05D004619 ORTHO05D005738 3.6e-94 348.6 226 74.3
Sabra18G0044100 Salix brachista HOM05D004619 ORTHO05D005738 4.7e-94 348.2 225 78.2
Potri.018G044300 Populus trichocarpa HOM05D004619 ORTHO05D005738 1.1e-93 347.1 225 77.8
Ca_12754_v3 Cicer arietinum L. HOM05D004619 ORTHO05D005738 1.4e-93 346.7 226 75.7
Peaxi162Scf00227g00812 Petunia axillaris HOM05D004619 ORTHO05D005738 1.4e-93 346.7 224 76.3
Sed0007447 Sechium edule HOM05D004619 ORTHO05D005738 2.3e-93 345.9 228 76.3
CsaV3_2G030840 Cucumis sativus L. HOM05D004619 ORTHO05D005738 5.2e-93 344.7 225 76.0
Glyma.17G193800 Glycine max HOM05D004619 ORTHO05D005738 5.2e-93 344.7 226 75.7
AT4G32910 Arabidopsis thaliana HOM05D004619 ORTHO05D005738 3.4e-92 342.0 225 73.8
PGR031G0242 Punica granatum HOM05D004619 ORTHO05D005738 4.4e-92 341.7 226 75.7
Cc08_g09590 Coffea canephora HOM05D004619 ORTHO05D005738 7.6e-92 340.9 226 73.9
CARHR240910 Cardamine hirsuta HOM05D004619 ORTHO05D005738 1.3e-91 340.1 225 73.8
Thhalv10024536m.g Eutrema salsugineum HOM05D004619 ORTHO05D005738 4.9e-91 338.2 225 72.9
Sp7g30680 Schrenkiella parvula HOM05D004619 ORTHO05D005738 6.4e-91 337.8 225 73.3
Lj1g0001172 Lotus japonicus HOM05D004619 ORTHO05D005738 1.1e-90 337.0 226 75.2
AL7G18800 Arabidopsis lyrata HOM05D004619 ORTHO05D005738 1.9e-90 336.3 225 73.3
Carub.0007s0758 Capsella rubella HOM05D004619 ORTHO05D005738 4.1e-90 335.1 225 72.4
THA.LOC104803757 Tarenaya hassleriana HOM05D004619 ORTHO05D005738 5.4e-90 334.7 227 73.6
A01p05370 Brassica napus HOM05D004619 ORTHO05D005738 2.7e-89 332.4 225 72.0
Migut.E01528 Erythranthe guttata HOM05D004619 ORTHO05D005738 6.0e-89 331.3 223 72.6
BcaC09g52091 Brassica carinata HOM05D004619 ORTHO05D005738 1.0e-88 330.5 225 71.6
C01p05790 Brassica napus HOM05D004619 ORTHO05D005738 1.0e-88 330.5 225 71.6
BolC1t00559H Brassica oleracea HOM05D004619 ORTHO05D005738 1.7e-88 329.7 225 71.6
BraA01t00511Z Brassica rapa HOM05D004619 ORTHO05D005738 1.7e-88 329.7 225 71.1
vmacro05371 Vaccinium macrocarpon HOM05D004619 ORTHO05D005738 2.3e-88 329.3 284 62.0
HPP92_005572 Vanilla planifolia HOM05D004619 ORTHO05D005738 4.3e-87 325.1 226 68.6
CDE02G4285 Ceratophyllum demersum HOM05D004619 ORTHO05D005738 5.6e-87 324.7 226 69.9
SalBow1G6937 Salvia bowleyana HOM05D004619 ORTHO05D005738 5.6e-87 324.7 226 71.2
Aa31sc131G40 Aethionema arabicum HOM05D004619 ORTHO05D005738 2.1e-86 322.8 238 67.2
MSTRG.1660 Avicennia marina HOM05D004619 ORTHO05D005738 2.1e-86 322.8 226 71.2
SGA_v2.0_scaffold169G38654 Striga asiatica HOM05D004619 ORTHO05D005738 4.7e-86 321.6 226 69.5
Rhsim07G0146900 Rhododendron simsii HOM05D004619 ORTHO05D005738 6.2e-86 321.2 214 73.8
ClCG08G012210 Citrullus lanatus HOM05D004619 ORTHO05D005738 8.1e-86 320.9 225 72.9
ATR0705G091 Amborella trichopoda HOM05D004619 ORTHO05D005738 3.1e-85 318.9 234 67.9
Os01g0746200 Oryza sativa ssp. japonica HOM05D004619 ORTHO05D005738 2.4e-82 309.3 225 66.2
Ah.10g035010 Amaranthus hybridus HOM05D004619 ORTHO05D005738 4.6e-81 305.1 225 69.8
SGA_v2.0_scaffold163G38073 Striga asiatica HOM05D004619 ORTHO05D005738 1.6e-78 296.6 218 66.5
Zm00001eb152980 Zea mays HOM05D004619 ORTHO05D005738 1.6e-78 296.6 225 65.3
MELO3C011139.2 Cucumis melo HOM05D004619 ORTHO05D005738 7.6e-76 287.7 225 65.8
Hund19512 Selenicereus undatus HOM05D004619 ORTHO05D005738 1.3e-75 287.0 298 52.7
Manes.16G075300 Manihot esculenta HOM05D004619 ORTHO05D005738 6.6e-72 274.6 225 65.3
vmacro23276 Vaccinium macrocarpon HOM05D004619 ORTHO05D005738 8.7e-72 274.2 284 55.6
TAR636G2525 Trochodendron aralioides HOM05D004619 ORTHO05D005738 7.3e-71 271.2 162 81.5
Actinidia14676 Actinidia chinensis HOM05D004619 ORTHO05D005738 1.4e-69 266.9 167 80.2
unitig_578.g16587 Utricularia gibba HOM05D004619 ORTHO05D005738 3.1e-69 265.8 223 61.9
Phvul.001G074000 Phaseolus vulgaris HOM05D004619 ORTHO05D005738 9.3e-66 254.2 163 76.1
Eucgr.C00551 Eucalyptus grandis HOM05D004619 ORTHO05D005738 4.0e-61 238.8 141 82.3
SHI18685 Sapria himalayana HOM05D004619 ORTHO05D005738 2.6e-60 236.1 229 56.3
Psat6g038280 Pisum sativum HOM05D004619 ORTHO05D005738 7.9e-57 224.6 141 76.6
VMungo0647G0418 Vigna mungo HOM05D004619 ORTHO05D005738 1.1e-55 220.7 141 76.6
Pp3c16_3750 Physcomitrium patens HOM05D004619 ORTHO05D005738 1.5e-52 210.3 241 47.7
Mapoly0014s0066 Marchantia polymorpha HOM05D004619 ORTHO05D005738 8.2e-46 188.0 236 44.1
Hma1.2p1_0049F.1_g028580 Hydrangea macrophylla HOM05D004619 ORTHO05D005738 1.4e-34 150.6 89 79.8
AagrBONN_evm.TU.Sc2ySwM_368.2349 Anthoceros agrestis HOM05D004619 ORTHO05D005738 6.1e-33 145.2 154 48.7
SEGI_12145 Sequoiadendron giganteum HOM05D004619 ORTHO05D005738 1.4e-32 144.1 112 60.7
FvH4_6g10180 Fragaria vesca HOM05D004619 ORTHO05D003203 2.2e-22 110.2 79 67.1
Lj5g0023577 Lotus japonicus HOM05D004619 ORTHO05D005738 4.8e-22 109.0 86 61.6
FAN14G2999 Fragaria x ananassa HOM05D004619 ORTHO05D003203 5.3e-21 105.5 61 78.7
Dinv23369 Davidia involucrata HOM05D004619 ORTHO05D005738 1.6e-17 94.0 85 57.6
CDE08G0324 Ceratophyllum demersum HOM05D004619 ORTHO05D005738 8.8e-16 88.2 98 49.0
SEGI_14473 Sequoiadendron giganteum HOM05D004619 ORTHO05D005738 5.9e-12 75.5 70 54.3
Nn8g39123 Nelumbo nucifera HOM05D005233 ORTHO05D006308 2.9e-11 73.2 48 72.9
CBR_g55391 Chara braunii HOM05D000019 ORTHO05D000002 3.2e-10 69.7 77 46.8
Glyma.14G146000 Glycine max HOM05D004619 ORTHO05D005738 4.2e-10 69.3 53 62.3
QL08p060719 Quercus lobata HOM05D004619 ORTHO05D005738 3.6e-09 66.2 42 76.2


User provided reference genes

Program Settings