Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc21.215 Carica papaya HOM05D001082 ORTHO05D005120 5.1e-72 274.2 133 100.0
Atru.chr6.17 Acer truncatum HOM05D001082 ORTHO05D005120 4.8e-46 188.0 124 71.8
Atru.chr12.2422 Acer truncatum HOM05D001082 ORTHO05D005120 6.3e-46 187.6 124 72.6
Ciclev10000026m.g Citrus clementina HOM05D001082 ORTHO05D005120 8.2e-46 187.2 118 73.7
Manes.15G096100 Manihot esculenta HOM05D001082 ORTHO05D005120 1.4e-45 186.4 124 71.8
Duzib235G1067 Durio zibethinus HOM05D001082 ORTHO05D005120 4.1e-45 184.9 126 72.2
TWI14G0841 Tripterygium wilfordii HOM05D001082 ORTHO05D005120 9.1e-45 183.7 118 74.6
RcHm_v2.0_Chr2g0126921 Rosa chinensis HOM05D001082 ORTHO05D005120 4.5e-44 181.4 123 69.9
Prupe.5G022000 Prunus persica HOM05D001082 ORTHO05D005120 2.9e-43 178.7 123 68.3
Aqoxy5G03217 Aquilegia oxysepala HOM05D001082 ORTHO05D005120 3.8e-43 178.3 120 67.5
COL.COLO4_31206 Corchorus olitorius HOM05D001082 ORTHO05D005120 3.8e-43 178.3 126 68.3
GSVIVG01015912001 Vitis vinifera HOM05D001082 ORTHO05D005120 5.0e-43 177.9 124 71.0
Dinv24538 Davidia involucrata HOM05D001082 ORTHO05D005120 8.5e-43 177.2 124 68.5
CiPaw.02G126600 Carya illinoinensis HOM05D001082 ORTHO05D005120 1.1e-42 176.8 124 66.9
TAR629G2955 Trochodendron aralioides HOM05D001082 ORTHO05D005120 1.9e-42 176.0 124 66.1
FAN09G1182 Fragaria x ananassa HOM05D001082 ORTHO05D005120 2.5e-42 175.6 122 68.0
MD10G1009800 Malus domestica HOM05D001082 ORTHO05D005120 2.5e-42 175.6 123 66.7
QL10p065261 Quercus lobata HOM05D001082 ORTHO05D005120 2.5e-42 175.6 123 68.3
Thecc.06G064200 Theobroma cacao HOM05D001082 ORTHO05D005120 2.5e-42 175.6 114 73.7
Ca_11506_v3 Cicer arietinum L. HOM05D001082 ORTHO05D005120 5.5e-42 174.5 126 67.5
FvH4_6g26400 Fragaria vesca HOM05D001082 ORTHO05D005120 9.4e-42 173.7 122 68.0
TPR.G11274 Trifolium pratense HOM05D001082 ORTHO05D005120 2.7e-41 172.2 126 65.9
FAN05G0906 Fragaria x ananassa HOM05D001082 ORTHO05D005120 3.6e-41 171.8 122 67.2
PSO782G2901 Papaver somniferum HOM05D001082 ORTHO05D005120 4.7e-41 171.4 124 66.9
Psat6g073960 Pisum sativum HOM05D001082 ORTHO05D005120 6.1e-41 171.0 126 65.1
Nn3g20376 Nelumbo nucifera HOM05D001082 ORTHO05D005120 8.0e-41 170.6 111 69.4
Cfa008545 Carpinus fangiana HOM05D001082 ORTHO05D005120 1.4e-40 169.9 123 66.7
Haze_11087 Corylus avellana HOM05D001082 ORTHO05D005120 1.4e-40 169.9 123 66.7
Gohir.D11G284200 Gossypium hirsutum HOM05D001082 ORTHO05D005120 1.8e-40 169.5 126 68.3
Gorai.007G307100 Gossypium raimondii HOM05D001082 ORTHO05D005120 1.8e-40 169.5 126 68.3
Lalb_Chr21g0315021 Lupinus albus HOM05D001082 ORTHO05D005120 1.8e-40 169.5 122 68.0
Gohir.A11G274000 Gossypium hirsutum HOM05D001082 ORTHO05D005120 2.3e-40 169.1 126 67.5
AT1G33410 Arabidopsis thaliana HOM05D001082 ORTHO05D005120 3.0e-40 168.7 124 64.5
ATR0810G183 Amborella trichopoda HOM05D001082 ORTHO05D005120 6.7e-40 167.5 123 65.0
CARHR032850 Cardamine hirsuta HOM05D001082 ORTHO05D005120 6.7e-40 167.5 124 64.5
Thhalv10006552m.g Eutrema salsugineum HOM05D001082 ORTHO05D005120 6.7e-40 167.5 124 64.5
Migut.N00999 Erythranthe guttata HOM05D001082 ORTHO05D005120 8.8e-40 167.2 126 62.7
Sabra01G0055900 Salix brachista HOM05D001082 ORTHO05D005120 8.8e-40 167.2 124 64.5
Glyma.13G142200 Glycine max HOM05D001082 ORTHO05D005120 1.1e-39 166.8 122 67.2
Lj5g0014962 Lotus japonicus HOM05D001082 ORTHO05D005120 1.5e-39 166.4 122 66.4
Medtr1g063180 Medicago truncatula HOM05D001082 ORTHO05D005120 1.5e-39 166.4 126 62.7
Sopen01g044980 Solanum pennellii HOM05D001082 ORTHO05D005120 1.5e-39 166.4 111 69.4
BcaB03g13701 Brassica carinata HOM05D001082 ORTHO05D005120 2.0e-39 166.0 124 63.7
BcaC05g27806 Brassica carinata HOM05D001082 ORTHO05D005120 2.0e-39 166.0 124 63.7
A05p24320 Brassica napus HOM05D001082 ORTHO05D005120 2.0e-39 166.0 124 63.7
C05p38080 Brassica napus HOM05D001082 ORTHO05D005120 2.0e-39 166.0 124 63.7
BolC5t32536H Brassica oleracea HOM05D001082 ORTHO05D005120 2.0e-39 166.0 124 63.7
BraA05t21326Z Brassica rapa HOM05D001082 ORTHO05D005120 2.0e-39 166.0 124 63.7
Peaxi162Scf00194g00732 Petunia axillaris HOM05D001082 ORTHO05D005120 2.0e-39 166.0 126 64.3
Solyc01g102540.3 Solanum lycopersicum HOM05D001082 ORTHO05D005120 2.0e-39 166.0 111 69.4
AL1G47790 Arabidopsis lyrata HOM05D001082 ORTHO05D005120 2.6e-39 165.6 124 62.9
Carub.0001s3160 Capsella rubella HOM05D001082 ORTHO05D005120 2.6e-39 165.6 124 64.5
CAN.G1379.30 Capsicum annuum HOM05D001082 ORTHO05D005120 2.6e-39 165.6 111 70.3
Potri.001G078600 Populus trichocarpa HOM05D001082 ORTHO05D005120 2.6e-39 165.6 124 63.7
CsaV3_2G011850 Cucumis sativus L. HOM05D001082 ORTHO05D005120 3.3e-39 165.2 120 62.5
Sp1g28860 Schrenkiella parvula HOM05D001082 ORTHO05D005120 4.4e-39 164.9 124 63.7
Actinidia11712 Actinidia chinensis HOM05D001082 ORTHO05D005120 5.7e-39 164.5 124 64.5
MSTRG.5181 Avicennia marina HOM05D001082 ORTHO05D005120 5.7e-39 164.5 126 62.7
Nitab4.5_0000399g0040 Nicotiana tabacum HOM05D001082 ORTHO05D005120 5.7e-39 164.5 124 64.5
vmacro01638 Vaccinium macrocarpon HOM05D001082 ORTHO05D005120 5.7e-39 164.5 124 63.7
MELO3C020407.2 Cucumis melo HOM05D001082 ORTHO05D005120 7.4e-39 164.1 120 63.3
PSO063G6006 Papaver somniferum HOM05D001082 ORTHO05D005120 7.4e-39 164.1 124 65.3
SGA_v2.0_scaffold8G04471 Striga asiatica HOM05D001082 ORTHO05D005120 9.7e-39 163.7 122 63.9
Lsat_1_v5_gn_7_54700 Lactuca sativa HOM05D001082 ORTHO05D005120 1.3e-38 163.3 116 66.4
Phvul.007G218900 Phaseolus vulgaris HOM05D001082 ORTHO05D005120 1.3e-38 163.3 122 65.6
DCAR_003267 Daucus carota HOM05D001082 ORTHO05D005120 1.7e-38 162.9 116 67.2
MD05G1161100 Malus domestica HOM05D001082 ORTHO05D005120 1.7e-38 162.9 116 68.1
THA.LOC104806485 Tarenaya hassleriana HOM05D001082 ORTHO05D005120 8.2e-38 160.6 124 62.9
CANSAT78G0369 Cannabis sativa HOM05D001082 ORTHO05D005120 1.8e-37 159.5 119 65.5
SalBow1G7939 Salvia bowleyana HOM05D001082 ORTHO05D005120 2.4e-37 159.1 126 62.7
Sed0025950 Sechium edule HOM05D001082 ORTHO05D005120 2.4e-37 159.1 120 63.3
Glyma.10G055100 Glycine max HOM05D001082 ORTHO05D005120 3.1e-37 158.7 122 64.8
ClCG06G008370 Citrullus lanatus HOM05D001082 ORTHO05D005120 5.3e-37 157.9 117 62.4
Eucgr.G00034 Eucalyptus grandis HOM05D001082 ORTHO05D005120 5.3e-37 157.9 124 58.9
Lj5C310G5 Lonicera japonica HOM05D001082 ORTHO05D005120 1.6e-36 156.4 117 63.2
PGR042G2652 Punica granatum HOM05D001082 ORTHO05D005120 2.6e-36 155.6 122 62.3
arahy.Tifrunner.gnm1.ann1.922X53 Arachis hypogaea HOM05D001082 ORTHO05D005120 3.5e-36 155.2 122 62.3
arahy.Tifrunner.gnm1.ann1.Y1BA5Y Arachis hypogaea HOM05D001082 ORTHO05D005120 3.5e-36 155.2 122 62.3
AUR62042820 Chenopodium quinoa HOM05D001082 ORTHO05D005120 4.5e-36 154.8 123 60.2
Zm00001eb232140 Zea mays HOM05D001082 ORTHO05D005120 4.5e-36 154.8 120 56.7
CSS0006928 Camellia sinensis var. sinensis HOM05D001082 ORTHO05D005120 5.9e-36 154.5 149 54.4
Lj3g0009617 Lotus japonicus HOM05D001082 ORTHO05D005120 1.0e-35 153.7 122 62.3
RcHm_v2.0_Chr4g0402211 Rosa chinensis HOM05D001082 ORTHO05D005120 1.0e-35 153.7 118 61.0
Oeu010602.3 Olea europaea HOM05D001082 ORTHO05D005120 1.3e-35 153.3 123 61.8
Aa31LG6G7920 Aethionema arabicum HOM05D001082 ORTHO05D005120 1.7e-35 152.9 114 63.2
HanXRQChr14g0452101 Helianthus annuus HOM05D001082 ORTHO05D005120 2.2e-35 152.5 110 65.5
Os02g0142950 Oryza sativa ssp. japonica HOM05D001082 ORTHO05D005120 2.9e-35 152.1 122 54.1
BcaC07g37555 Brassica carinata HOM05D001082 ORTHO05D005120 5.0e-35 151.4 115 65.2
Os02g0142500 Oryza sativa ssp. japonica HOM05D001082 ORTHO05D005120 6.5e-35 151.0 119 53.8
Rhsim11G0112000 Rhododendron simsii HOM05D001082 ORTHO05D005120 8.5e-35 150.6 117 60.7
Sc07g0003370 Simmondsia chinensis HOM05D001082 ORTHO05D005120 8.5e-35 150.6 116 62.1
ECA233G2822 Erigeron canadensis HOM05D001082 ORTHO05D005120 1.1e-34 150.2 109 64.2
CDE01G0790 Ceratophyllum demersum HOM05D001082 ORTHO05D005120 5.5e-34 147.9 120 56.7
VMungo0720G0635 Vigna mungo HOM05D001082 ORTHO05D000001 1.6e-33 146.4 112 63.4
ECA233G1839 Erigeron canadensis HOM05D001082 ORTHO05D005120 8.0e-33 144.1 110 60.0
ECA238G2349 Erigeron canadensis HOM05D001082 ORTHO05D005120 1.4e-32 143.3 110 60.9
EL10Ac6g13928 Beta vulgaris HOM05D001082 ORTHO05D005120 1.8e-32 142.9 118 58.5
arahy.Tifrunner.gnm1.ann1.CLUS6A Arachis hypogaea HOM05D001082 ORTHO05D005120 4.0e-32 141.7 121 57.0
AUR62032513 Chenopodium quinoa HOM05D001082 ORTHO05D005120 1.5e-31 139.8 112 59.8
ECA233G1970 Erigeron canadensis HOM05D001082 ORTHO05D005120 5.3e-29 131.3 116 56.9
unitig_22.g5791 Utricularia gibba HOM05D001082 ORTHO05D005120 1.6e-28 129.8 106 53.8
SMO239G0052 Selaginella moellendorffii HOM05D001082 ORTHO05D005120 9.1e-21 104.0 123 42.3
AagrBONN_evm.TU.Sc2ySwM_362.2782 Anthoceros agrestis HOM05D001082 ORTHO05D005120 4.5e-20 101.7 124 41.1
Mapoly0008s0081 Marchantia polymorpha HOM05D001082 ORTHO05D005120 1.0e-19 100.5 119 40.3
Pp3c11_26590 Physcomitrium patens HOM05D001082 ORTHO05D005120 2.9e-19 99.0 126 46.0
MD08G1158600 Malus domestica HOM05D001082 ORTHO05D005120 6.3e-14 81.3 82 50.0
BolC8t47897H Brassica oleracea HOM05D001082 ORTHO05D005120 1.8e-08 63.2 45 68.9
Nitab4.5_0004090g0150 Nicotiana tabacum HOM05D001082 ORTHO05D005120 8.9e-08 60.8 42 66.7
Ah.03g136660 Amaranthus hybridus HOM05D001082 ORTHO05D005120 1.3e-06 57.0 38 68.4


User provided reference genes

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