Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc199.9 Carica papaya HOM05D000966 ORTHO05D002384 2.7e-128 461.8 208 100.0
Cfa020771 Carpinus fangiana HOM05D000966 ORTHO05D002384 4.1e-60 235.3 229 51.5
THA.LOC104819902 Tarenaya hassleriana HOM05D000966 ORTHO05D002384 7.8e-59 231.1 226 50.4
CiPaw.15G163700 Carya illinoinensis HOM05D000966 ORTHO05D002384 5.6e-57 224.9 229 48.0
Duzib168G1082 Durio zibethinus HOM05D000966 ORTHO05D002384 2.8e-56 222.6 218 49.5
Thecc.09G154800 Theobroma cacao HOM05D000966 ORTHO05D002384 2.8e-56 222.6 218 49.1
Thhalv10025007m.g Eutrema salsugineum HOM05D000966 ORTHO05D002384 1.8e-55 219.9 126 70.6
Prupe.1G101500 Prunus persica HOM05D000966 ORTHO05D002384 1.8e-55 219.9 227 48.0
Gohir.A13G206300 Gossypium hirsutum HOM05D000966 ORTHO05D002384 2.3e-55 219.5 220 49.1
Gohir.D13G210900 Gossypium hirsutum HOM05D000966 ORTHO05D002384 3.1e-55 219.2 220 49.1
Gorai.013G240900 Gossypium raimondii HOM05D000966 ORTHO05D002384 3.1e-55 219.2 220 49.1
A08p19050 Brassica napus HOM05D000966 ORTHO05D002384 8.9e-55 217.6 217 48.4
COL.COLO4_36568 Corchorus olitorius HOM05D000966 ORTHO05D002384 2.0e-54 216.5 218 49.5
BraA08t33866Z Brassica rapa HOM05D000966 ORTHO05D002384 2.6e-54 216.1 217 47.5
Sp7g28740 Schrenkiella parvula HOM05D000966 ORTHO05D002384 2.6e-54 216.1 233 47.6
ClCG06G012700 Citrullus lanatus HOM05D000966 ORTHO05D002384 3.4e-54 215.7 234 45.7
Aa31LG2G19520 Aethionema arabicum HOM05D000966 ORTHO05D002384 5.8e-54 214.9 232 48.3
BcaB03g12663 Brassica carinata HOM05D000966 ORTHO05D002384 8.3e-53 211.1 223 47.1
AT4G30860 Arabidopsis thaliana HOM05D000966 ORTHO05D002384 2.4e-52 209.5 125 68.0
C03p88480 Brassica napus HOM05D000966 ORTHO05D002384 3.2e-52 209.1 221 45.2
CARHR238730 Cardamine hirsuta HOM05D000966 ORTHO05D002384 7.0e-52 208.0 127 66.1
FAN12G1904 Fragaria x ananassa HOM05D000966 ORTHO05D002384 1.2e-51 207.2 224 45.5
MELO3C010193.2 Cucumis melo HOM05D000966 ORTHO05D002384 1.6e-51 206.8 229 47.2
BcaC01g01135 Brassica carinata HOM05D000966 ORTHO05D002384 2.0e-51 206.5 221 44.3
BolC3t21156H Brassica oleracea HOM05D000966 ORTHO05D002384 2.0e-51 206.5 221 44.3
AL7G21250 Arabidopsis lyrata HOM05D000966 ORTHO05D002384 3.5e-51 205.7 125 65.6
QL02p094348 Quercus lobata HOM05D000966 ORTHO05D002384 3.5e-51 205.7 118 70.3
Carub.0007s0969 Capsella rubella HOM05D000966 ORTHO05D002384 6.0e-51 204.9 125 64.8
MD16G1258900 Malus domestica HOM05D000966 ORTHO05D002384 7.8e-51 204.5 227 47.1
Ciclev10008144m.g Citrus clementina HOM05D000966 ORTHO05D002384 1.3e-50 203.8 220 47.3
Sed0005530 Sechium edule HOM05D000966 ORTHO05D002384 1.3e-50 203.8 226 46.5
Manes.14G113800 Manihot esculenta HOM05D000966 ORTHO05D002384 8.6e-50 201.1 126 64.3
Atru.chr7.388 Acer truncatum HOM05D000966 ORTHO05D002384 5.6e-49 198.4 144 54.9
FvH4_4g08820 Fragaria vesca HOM05D000966 ORTHO05D002384 1.6e-48 196.8 217 44.7
RcHm_v2.0_Chr4g0405361 Rosa chinensis HOM05D000966 ORTHO05D002384 3.6e-48 195.7 219 43.4
FAN07G0432 Fragaria x ananassa HOM05D000966 ORTHO05D002384 8.0e-48 194.5 217 44.7
Dinv41333 Davidia involucrata HOM05D000966 ORTHO05D002384 1.1e-47 194.1 233 43.3
CsaV3_1G029250 Cucumis sativus L. HOM05D000966 ORTHO05D002384 4.0e-47 192.2 120 63.3
FAN17G0011 Fragaria x ananassa HOM05D000966 ORTHO05D002384 6.8e-47 191.4 217 45.2
CSS0013550 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D002384 1.5e-46 190.3 242 43.4
GSVIVG01023699001 Vitis vinifera HOM05D000966 ORTHO05D002384 2.0e-46 189.9 226 45.1
CSS0008046 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D002384 5.8e-46 188.3 242 43.0
Lj6g0021714 Lotus japonicus HOM05D000966 ORTHO05D002384 4.9e-45 185.3 201 48.8
Potri.018G102100 Populus trichocarpa HOM05D000966 ORTHO05D002384 6.4e-45 184.9 120 61.7
EL10Ac8g18900 Beta vulgaris HOM05D000966 ORTHO05D002384 2.4e-44 183.0 236 43.6
AUR62028372 Chenopodium quinoa HOM05D000966 ORTHO05D002384 2.4e-44 183.0 212 46.7
arahy.Tifrunner.gnm1.ann1.BQLE9W Arachis hypogaea HOM05D000966 ORTHO05D002384 6.0e-43 178.3 139 55.4
Phvul.009G195400 Phaseolus vulgaris HOM05D000966 ORTHO05D002384 1.0e-42 177.6 203 43.3
Phvul.001G083533 Phaseolus vulgaris HOM05D000966 ORTHO05D002384 1.3e-42 177.2 202 44.1
Phvul.001G083666 Phaseolus vulgaris HOM05D000966 ORTHO05D002384 1.3e-42 177.2 202 44.1
TWI34G0436 Tripterygium wilfordii HOM05D000966 ORTHO05D002384 1.3e-42 177.2 219 42.9
Nn8g40137 Nelumbo nucifera HOM05D000966 ORTHO05D002384 1.7e-42 176.8 235 40.9
VMungo1309G2426 Vigna mungo HOM05D000966 ORTHO05D002384 1.7e-42 176.8 204 44.6
CANSAT11G0969 Cannabis sativa HOM05D000966 ORTHO05D002384 2.3e-42 176.4 218 43.1
Glyma.06G223300 Glycine max HOM05D000966 ORTHO05D002384 2.3e-42 176.4 204 45.6
vmacro13070 Vaccinium macrocarpon HOM05D000966 ORTHO05D002384 5.1e-42 175.3 124 58.1
Psat1g023240 Pisum sativum HOM05D000966 ORTHO05D002384 6.6e-42 174.9 114 64.0
Eucgr.C01233 Eucalyptus grandis HOM05D000966 ORTHO05D002384 2.5e-41 172.9 125 58.4
PSO063G2137 Papaver somniferum HOM05D000966 ORTHO05D002384 2.5e-41 172.9 127 58.3
TPR.G14496 Trifolium pratense HOM05D000966 ORTHO05D002384 4.3e-41 172.2 127 57.5
Lalb_Chr11g0072461 Lupinus albus HOM05D000966 ORTHO05D002384 1.2e-40 170.6 115 61.7
PSO782G3854 Papaver somniferum HOM05D000966 ORTHO05D002384 1.1e-39 167.5 118 58.5
TAR383G0488 Trochodendron aralioides HOM05D000966 ORTHO05D002384 1.8e-39 166.8 104 61.5
Ah.09g228570 Amaranthus hybridus HOM05D000966 ORTHO05D002384 2.3e-39 166.4 116 58.6
arahy.Tifrunner.gnm1.ann1.XD33H1 Arachis hypogaea HOM05D000966 ORTHO05D002384 2.3e-39 166.4 106 62.3
Solyc07g006050.3 Solanum lycopersicum HOM05D000966 ORTHO05D002384 4.0e-39 165.6 124 54.8
PGR102G3031 Punica granatum HOM05D000966 ORTHO05D002384 5.2e-39 165.2 118 55.9
PGSC0003DMG401011157 Solanum tuberosum HOM05D000966 ORTHO05D002384 6.8e-39 164.9 124 54.8
Sopen07g002180 Solanum pennellii HOM05D000966 ORTHO05D002384 1.2e-38 164.1 116 54.3
Sabra18G0087800 Salix brachista HOM05D000966 ORTHO05D002384 1.5e-38 163.7 104 63.5
MBI15_g07483_MAGBIO Magnolia biondii HOM05D000966 ORTHO05D002384 5.8e-38 161.8 120 53.3
CAN.G1190.17 Capsicum annuum HOM05D000966 ORTHO05D002384 1.3e-37 160.6 116 54.3
TWI32G0919 Tripterygium wilfordii HOM05D000966 ORTHO05D002384 3.7e-37 159.1 122 51.6
DCAR_014798 Daucus carota HOM05D000966 ORTHO05D002384 4.9e-37 158.7 222 40.5
Medtr0071s0100 Medicago truncatula HOM05D000966 ORTHO05D002384 5.4e-36 155.2 105 62.9
Oeu010275.1 Olea europaea HOM05D000966 ORTHO05D002384 5.4e-36 155.2 130 50.8
Duzib187G0743 Durio zibethinus HOM05D000966 ORTHO05D002384 7.1e-36 154.8 123 53.7
Sc14g0001010 Simmondsia chinensis HOM05D000966 ORTHO05D002384 2.1e-35 153.3 117 53.0
ATR0580G159 Amborella trichopoda HOM05D000966 ORTHO05D002384 7.8e-35 151.4 118 51.7
MSTRG.6166 Avicennia marina HOM05D000966 ORTHO05D002384 7.8e-35 151.4 116 52.6
HanXRQChr03g0066001 Helianthus annuus HOM05D000966 ORTHO05D002384 8.6e-34 147.9 201 37.8
Aqoxy7G03278 Aquilegia oxysepala HOM05D000966 ORTHO05D002384 3.3e-33 146.0 127 51.2
SHI02830 Sapria himalayana HOM05D000966 ORTHO05D002384 1.6e-32 143.7 122 47.5
Cc06_g14440 Coffea canephora HOM05D000966 ORTHO05D002384 6.2e-32 141.7 122 48.4
Os02g0611300 Oryza sativa ssp. japonica HOM05D000966 ORTHO05D002384 6.8e-31 138.3 122 50.8
SEGI_18174 Sequoiadendron giganteum HOM05D000966 ORTHO05D002384 3.4e-30 136.0 117 49.6
Hma1.2p1_0028F.1_g017810 Hydrangea macrophylla HOM05D000966 ORTHO05D002384 7.6e-30 134.8 233 36.1
Zm00001eb184480 Zea mays HOM05D000966 ORTHO05D002384 9.9e-30 134.4 179 36.3
Lsat_1_v5_gn_7_50901 Lactuca sativa HOM05D000966 ORTHO05D002384 4.2e-28 129.0 206 38.3
SGA_v2.0_scaffold265G46072 Striga asiatica HOM05D000966 ORTHO05D002384 4.2e-28 129.0 162 34.6
CDE02G0098 Ceratophyllum demersum HOM05D000966 ORTHO05D002384 2.7e-27 126.3 110 48.2
HanXRQChr12g0357821 Helianthus annuus HOM05D000966 ORTHO05D002384 7.3e-25 118.2 115 47.0
ECA240G3489 Erigeron canadensis HOM05D000966 ORTHO05D002384 1.2e-24 117.5 199 39.7
Actinidia33610 Actinidia chinensis HOM05D000966 ORTHO05D002384 2.8e-24 116.3 211 36.5
HanXRQChr12g0357931 Helianthus annuus HOM05D000966 ORTHO05D002384 1.8e-23 113.6 98 46.9
Lj9C723G5 Lonicera japonica HOM05D000966 ORTHO05D002384 1.8e-23 113.6 217 32.3
DCAR_017928 Daucus carota HOM05D000966 ORTHO05D002384 2.4e-23 113.2 98 44.9
ECA240G2206 Erigeron canadensis HOM05D000966 ORTHO05D002384 7.6e-22 108.2 114 44.7
Haze_19110 Corylus avellana HOM05D000966 ORTHO05D002384 6.4e-21 105.1 161 40.4
Nitab4.5_0002809g0080 Nicotiana tabacum HOM05D000966 ORTHO05D002384 1.2e-19 100.9 118 37.3
Mapoly0045s0061 Marchantia polymorpha HOM05D000966 ORTHO05D002384 3.9e-18 95.9 146 37.7
Rhsim01G0021300 Rhododendron simsii HOM05D000966 ORTHO05D002384 9.6e-17 91.3 66 54.5
Nitab4.5_0001036g0020 Nicotiana tabacum HOM05D000966 ORTHO05D002384 1.4e-15 87.4 58 51.7
Pp3c2_35860 Physcomitrium patens HOM05D000966 ORTHO05D002384 9.9e-14 81.3 117 32.5
Glyma.18G302200 Glycine max HOM05D000966 ORTHO05D002384 1.3e-13 80.9 62 50.0
Glyma.08G000100 Glycine max HOM05D000142 ORTHO05D000124 7.9e-11 71.6 65 55.4
AagrBONN_evm.TU.Sc2ySwM_344.5298 Anthoceros agrestis HOM05D000966 ORTHO05D002384 1.8e-10 70.5 119 33.6
arahy.Tifrunner.gnm1.ann1.KNY9JW Arachis hypogaea HOM05D000966 ORTHO05D002384 1.8e-07 60.5 91 38.5
Glyma.12G000226 Glycine max HOM05D000966 ORTHO05D002384 4.5e-06 55.8 47 55.3
TPR.G6920 Trifolium pratense HOM05D000706 ORTHO05D001554 9.9e-06 54.7 68 33.8


User provided reference genes

Program Settings