Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc165.35 Carica papaya HOM05D004007 ORTHO05D005127 1.6e-129 466.1 239 100.0
Dinv16374 Davidia involucrata HOM05D004007 ORTHO05D005127 9.4e-117 423.7 236 88.6
Actinidia09529 Actinidia chinensis HOM05D004007 ORTHO05D005127 1.6e-116 422.9 236 88.6
CiPaw.03G267900 Carya illinoinensis HOM05D004007 ORTHO05D005127 2.1e-116 422.5 236 88.6
QL09p040238 Quercus lobata HOM05D004007 ORTHO05D005127 7.9e-116 420.6 236 88.6
GSVIVG01028373001 Vitis vinifera HOM05D004007 ORTHO05D005127 1.8e-115 419.5 236 87.3
Nn3g19723 Nelumbo nucifera HOM05D004007 ORTHO05D005127 3.0e-115 418.7 235 88.5
THA.LOC104820071 Tarenaya hassleriana HOM05D004007 ORTHO05D005127 8.8e-115 417.2 236 86.9
TAR636G3081 Trochodendron aralioides HOM05D004007 ORTHO05D005127 1.1e-114 416.8 235 87.2
THA.LOC104804042 Tarenaya hassleriana HOM05D004007 ORTHO05D005127 2.0e-114 416.0 236 86.9
Duzib138G0603 Durio zibethinus HOM05D004007 ORTHO05D005127 2.6e-114 415.6 236 86.9
Atru.chr5.1778 Acer truncatum HOM05D004007 ORTHO05D005127 3.3e-114 415.2 236 87.3
Hma1.2p1_0273F.1_g109400 Hydrangea macrophylla HOM05D004007 ORTHO05D005127 3.3e-114 415.2 236 86.9
Dinv34652 Davidia involucrata HOM05D004007 ORTHO05D005127 5.7e-114 414.5 234 88.0
Sc16g0004880 Simmondsia chinensis HOM05D004007 ORTHO05D005127 9.7e-114 413.7 236 86.0
ClCG06G001530 Citrullus lanatus HOM05D004007 ORTHO05D005127 1.7e-113 412.9 236 86.9
Thecc.01G253900 Theobroma cacao HOM05D004007 ORTHO05D005127 1.7e-113 412.9 236 86.4
CiPaw.04G188500 Carya illinoinensis HOM05D004007 ORTHO05D005127 2.2e-113 412.5 236 86.9
Gorai.001G179900 Gossypium raimondii HOM05D004007 ORTHO05D005127 2.2e-113 412.5 236 85.2
Thhalv10001996m.g Eutrema salsugineum HOM05D004007 ORTHO05D005127 2.8e-113 412.1 236 86.0
Lj1A71T65 Lonicera japonica HOM05D004007 ORTHO05D005127 2.8e-113 412.1 236 84.7
COL.COLO4_34373 Corchorus olitorius HOM05D004007 ORTHO05D005127 8.2e-113 410.6 236 84.7
CANSAT01G1551 Cannabis sativa HOM05D004007 ORTHO05D005127 1.1e-112 410.2 236 85.2
Glyma.13G125400 Glycine max HOM05D004007 ORTHO05D005127 1.1e-112 410.2 236 86.0
Gohir.A07G150500 Gossypium hirsutum HOM05D004007 ORTHO05D005127 1.1e-112 410.2 236 84.7
DCAR_018503 Daucus carota HOM05D004007 ORTHO05D005127 2.4e-112 409.1 236 82.6
Psat6g062440 Pisum sativum HOM05D004007 ORTHO05D005127 2.4e-112 409.1 236 85.6
vmacro02694 Vaccinium macrocarpon HOM05D004007 ORTHO05D005127 2.4e-112 409.1 236 86.0
Gohir.D07G157000 Gossypium hirsutum HOM05D004007 ORTHO05D005127 3.1e-112 408.7 236 85.2
Aqoxy2G03706 Aquilegia oxysepala HOM05D004007 ORTHO05D005127 4.1e-112 408.3 236 83.5
MELO3C022382.2 Cucumis melo HOM05D004007 ORTHO05D005127 4.1e-112 408.3 236 85.2
Duzib211G0126 Durio zibethinus HOM05D004007 ORTHO05D005127 4.1e-112 408.3 236 84.3
Gorai.001G180000 Gossypium raimondii HOM05D004007 ORTHO05D005127 5.3e-112 407.9 236 85.2
CsaV3_6G007490 Cucumis sativus L. HOM05D004007 ORTHO05D005127 6.9e-112 407.5 236 85.6
Glyma.10G039000 Glycine max HOM05D004007 ORTHO05D005127 6.9e-112 407.5 236 86.0
Gohir.A07G150600 Gossypium hirsutum HOM05D004007 ORTHO05D005127 9.1e-112 407.1 236 84.3
Manes.13G037000 Manihot esculenta HOM05D004007 ORTHO05D005127 9.1e-112 407.1 236 84.7
Phvul.007G190800 Phaseolus vulgaris HOM05D004007 ORTHO05D005127 1.2e-111 406.8 236 85.6
Sed0019801 Sechium edule HOM05D004007 ORTHO05D005127 1.2e-111 406.8 236 85.6
Medtr1g069645 Medicago truncatula HOM05D004007 ORTHO05D005127 2.0e-111 406.0 236 83.9
Rhsim01G0261700 Rhododendron simsii HOM05D004007 ORTHO05D005127 2.6e-111 405.6 256 80.9
Lj5g0009759 Lotus japonicus HOM05D004007 ORTHO05D005127 4.5e-111 404.8 236 86.4
Gohir.D07G156900 Gossypium hirsutum HOM05D004007 ORTHO05D005127 7.7e-111 404.1 245 82.4
Manes.12G034800 Manihot esculenta HOM05D004007 ORTHO05D005127 1.0e-110 403.7 236 83.5
Potri.014G195700 Populus trichocarpa HOM05D004007 ORTHO05D005127 1.0e-110 403.7 236 83.5
Sp3g33640 Schrenkiella parvula HOM05D004007 ORTHO05D005127 1.3e-110 403.3 236 83.9
TAR365G0842 Trochodendron aralioides HOM05D004007 ORTHO05D005127 1.3e-110 403.3 224 88.8
Ca_09660_v3 Cicer arietinum L. HOM05D004007 ORTHO05D005127 1.7e-110 402.9 236 84.7
Sabra14G0145900 Salix brachista HOM05D004007 ORTHO05D005127 1.7e-110 402.9 236 83.5
Ciclev10020300m.g Citrus clementina HOM05D004007 ORTHO05D005127 2.2e-110 402.5 236 84.3
Prupe.8G219400 Prunus persica HOM05D004007 ORTHO05D005127 2.2e-110 402.5 236 83.9
AL3G53400 Arabidopsis lyrata HOM05D004007 ORTHO05D005127 2.9e-110 402.1 236 84.3
AT2G20420 Arabidopsis thaliana HOM05D004007 ORTHO05D005127 3.8e-110 401.7 236 83.9
TWI18G0319 Tripterygium wilfordii HOM05D004007 ORTHO05D005127 3.8e-110 401.7 236 83.9
VMungo0720G0501 Vigna mungo HOM05D004007 ORTHO05D005127 6.5e-110 401.0 236 83.9
Carub.0003s3481 Capsella rubella HOM05D004007 ORTHO05D005127 8.5e-110 400.6 236 83.1
PGSC0003DMG400020149 Solanum tuberosum HOM05D004007 ORTHO05D005127 1.1e-109 400.2 236 82.6
Aa31LG8G17390 Aethionema arabicum HOM05D004007 ORTHO05D005127 1.4e-109 399.8 236 83.9
C09p16710 Brassica napus HOM05D004007 ORTHO05D005127 1.4e-109 399.8 236 83.9
BolC9t54570H Brassica oleracea HOM05D004007 ORTHO05D005127 1.4e-109 399.8 236 83.9
BraA09t37039Z Brassica rapa HOM05D004007 ORTHO05D005127 1.4e-109 399.8 236 83.9
Rhsim13G0038000 Rhododendron simsii HOM05D004007 ORTHO05D005127 1.4e-109 399.8 240 83.8
MSTRG.18338 Avicennia marina HOM05D004007 ORTHO05D005127 1.9e-109 399.4 236 82.2
BcaB03g16833 Brassica carinata HOM05D004007 ORTHO05D005127 2.5e-109 399.1 236 83.5
Solyc06g083790.3 Solanum lycopersicum HOM05D004007 ORTHO05D005127 2.5e-109 399.1 236 82.6
Sopen06g035200 Solanum pennellii HOM05D004007 ORTHO05D005127 2.5e-109 399.1 236 82.6
BcaB07g31587 Brassica carinata HOM05D004007 ORTHO05D005127 3.2e-109 398.7 236 82.6
A09p13930 Brassica napus HOM05D004007 ORTHO05D005127 4.2e-109 398.3 236 83.5
BcaC04g22683 Brassica carinata HOM05D004007 ORTHO05D005127 7.2e-109 397.5 236 83.5
Cc01_g18040 Coffea canephora HOM05D004007 ORTHO05D005127 7.2e-109 397.5 236 82.2
RcHm_v2.0_Chr6g0287371 Rosa chinensis HOM05D004007 ORTHO05D005127 7.2e-109 397.5 236 84.3
TPR.G5690 Trifolium pratense HOM05D004007 ORTHO05D005127 7.2e-109 397.5 236 85.6
MSTRG.21476 Avicennia marina HOM05D004007 ORTHO05D005127 9.4e-109 397.1 236 82.2
TWI12G1332 Tripterygium wilfordii HOM05D004007 ORTHO05D005127 9.4e-109 397.1 235 82.1
ATR0736G150 Amborella trichopoda HOM05D004007 ORTHO05D005127 1.6e-108 396.4 236 81.8
CAN.G771.36 Capsicum annuum HOM05D004007 ORTHO05D005127 2.7e-108 395.6 236 81.4
Nitab4.5_0000917g0090 Nicotiana tabacum HOM05D004007 ORTHO05D005127 2.7e-108 395.6 231 83.5
Migut.N02218 Erythranthe guttata HOM05D004007 ORTHO05D005127 3.6e-108 395.2 236 81.8
CSS0014309 Camellia sinensis var. sinensis HOM05D004007 ORTHO05D005127 4.7e-108 394.8 236 83.9
MBI07_g31081_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 4.7e-108 394.8 232 83.6
PSO210G2341 Papaver somniferum HOM05D004007 ORTHO05D005127 6.1e-108 394.4 236 82.6
PSO832G3765 Papaver somniferum HOM05D004007 ORTHO05D005127 6.1e-108 394.4 236 82.6
FvH4_2g20990 Fragaria vesca HOM05D004007 ORTHO05D005127 7.9e-108 394.0 236 83.1
BcaB08g34906 Brassica carinata HOM05D004007 ORTHO05D005127 1.0e-107 393.7 236 82.2
C07p00650 Brassica napus HOM05D004007 ORTHO05D005127 1.0e-107 393.7 236 81.8
FAN15G2391 Fragaria x ananassa HOM05D004007 ORTHO05D005127 2.3e-107 392.5 236 82.2
Lalb_Chr06g0170611 Lupinus albus HOM05D004007 ORTHO05D005127 2.3e-107 392.5 236 81.8
Oeu035732.1 Olea europaea HOM05D004007 ORTHO05D005127 2.3e-107 392.5 236 79.7
Os02g0621700 Oryza sativa ssp. japonica HOM05D004007 ORTHO05D005127 2.3e-107 392.5 236 80.5
SGA_v2.0_scaffold138G35202 Striga asiatica HOM05D004007 ORTHO05D005127 2.3e-107 392.5 236 82.6
MD05G1193100 Malus domestica HOM05D004007 ORTHO05D005127 3.9e-107 391.7 236 81.8
Lalb_Chr02g0152651 Lupinus albus HOM05D004007 ORTHO05D005127 5.2e-107 391.3 236 81.8
BraA07t27822Z Brassica rapa HOM05D004007 ORTHO05D005127 6.7e-107 391.0 236 81.4
Haze_24666 Corylus avellana HOM05D004007 ORTHO05D005127 6.7e-107 391.0 288 70.8
Haze_24671 Corylus avellana HOM05D004007 ORTHO05D005127 6.7e-107 391.0 288 70.8
arahy.Tifrunner.gnm1.ann1.ZVPG3A Arachis hypogaea HOM05D004007 ORTHO05D005127 1.1e-106 390.2 236 81.4
CDE05G0056 Ceratophyllum demersum HOM05D004007 ORTHO05D005127 1.5e-106 389.8 236 81.8
PGR031G0590 Punica granatum HOM05D004007 ORTHO05D005127 1.5e-106 389.8 236 83.5
MD10G1179600 Malus domestica HOM05D004007 ORTHO05D005127 2.0e-106 389.4 236 81.4
unitig_22.g5450 Utricularia gibba HOM05D004007 ORTHO05D005127 2.0e-106 389.4 236 82.2
A07p00310 Brassica napus HOM05D004007 ORTHO05D005127 2.6e-106 389.0 236 80.9
Lsat_1_v5_gn_8_92300 Lactuca sativa HOM05D004007 ORTHO05D005127 2.6e-106 389.0 236 81.8
Potri.002G259600 Populus trichocarpa HOM05D004007 ORTHO05D005127 2.6e-106 389.0 236 80.9
HPP92_008549 Vanilla planifolia HOM05D004007 ORTHO05D005127 2.6e-106 389.0 236 79.7
Zm00001eb247500 Zea mays HOM05D004007 ORTHO05D005127 2.6e-106 389.0 236 80.1
Lsat_1_v5_gn_9_10741 Lactuca sativa HOM05D004007 ORTHO05D005127 3.3e-106 388.7 236 82.2
BcaC06g36729 Brassica carinata HOM05D004007 ORTHO05D005127 5.7e-106 387.9 236 80.9
BolC7t40509H Brassica oleracea HOM05D004007 ORTHO05D005127 5.7e-106 387.9 236 80.9
Hund04389 Selenicereus undatus HOM05D004007 ORTHO05D005127 9.7e-106 387.1 236 79.2
CDE02G1941 Ceratophyllum demersum HOM05D004007 ORTHO05D005127 1.7e-105 386.3 232 83.6
FAN24G2352 Fragaria x ananassa HOM05D004007 ORTHO05D005127 4.8e-105 384.8 251 78.5
SalBow6G2566 Salvia bowleyana HOM05D004007 ORTHO05D005127 4.8e-105 384.8 236 79.7
HanXRQChr04g0111281 Helianthus annuus HOM05D004007 ORTHO05D005127 6.3e-105 384.4 236 80.5
Migut.D00454 Erythranthe guttata HOM05D004007 ORTHO05D005127 1.1e-104 383.6 236 79.7
EL10Ac6g15333 Beta vulgaris HOM05D004007 ORTHO05D005127 1.8e-104 382.9 236 78.4
HanXRQChr10g0280751 Helianthus annuus HOM05D004007 ORTHO05D005127 1.8e-104 382.9 234 81.2
Zm00001eb185030 Zea mays HOM05D004007 ORTHO05D005127 2.4e-104 382.5 236 78.8
Eucgr.H00143 Eucalyptus grandis HOM05D004007 ORTHO05D005127 5.3e-104 381.3 232 81.5
FAN27G2583 Fragaria x ananassa HOM05D004007 ORTHO05D005127 5.9e-103 377.9 245 79.2
Peaxi162Scf00415g00213 Petunia axillaris HOM05D004007 ORTHO05D005127 5.9e-103 377.9 244 75.8
Peaxi162Scf00013g01239 Petunia axillaris HOM05D004007 ORTHO05D005127 2.9e-102 375.6 236 78.4
AUR62017860 Chenopodium quinoa HOM05D004007 ORTHO05D005127 2.5e-101 372.5 238 77.3
Sabra02G0197500 Salix brachista HOM05D004007 ORTHO05D005127 3.2e-101 372.1 267 70.8
Nn1g02862 Nelumbo nucifera HOM05D004007 ORTHO05D005127 1.7e-97 359.8 203 88.2
SEGI_32315 Sequoiadendron giganteum HOM05D004007 ORTHO05D005127 5.3e-96 354.8 242 70.2
MBI07_g32831_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 1.0e-94 350.5 216 81.5
FAN20G1240 Fragaria x ananassa HOM05D004007 ORTHO05D005127 1.3e-94 350.1 278 69.8
CARHR110970 Cardamine hirsuta HOM05D004007 ORTHO05D005127 3.8e-94 348.6 204 84.3
arahy.Tifrunner.gnm1.ann1.TE5CG8 Arachis hypogaea HOM05D004007 ORTHO05D005127 2.5e-93 345.9 317 60.3
Nitab4.5_0001919g0010 Nicotiana tabacum HOM05D004007 ORTHO05D005127 6.8e-91 337.8 236 72.9
Nitab4.5_0003295g0070 Nicotiana tabacum HOM05D004007 ORTHO05D005127 1.2e-90 337.0 227 73.1
SalBow4G2771 Salvia bowleyana HOM05D004007 ORTHO05D005127 1.5e-90 336.7 236 71.6
AUR62003546 Chenopodium quinoa HOM05D004007 ORTHO05D005127 5.9e-87 324.7 203 77.8
SMO201G0240 Selaginella moellendorffii HOM05D004007 ORTHO05D005127 1.1e-85 320.5 221 71.5
Mapoly0005s0186 Marchantia polymorpha HOM05D004007 ORTHO05D005127 5.5e-85 318.2 215 71.2
MBI10_g27626_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 1.2e-84 317.0 227 72.2
Pp3c20_5640 Physcomitrium patens HOM05D004007 ORTHO05D005127 4.9e-81 305.1 232 64.7
Oeu055792.1 Olea europaea HOM05D004007 ORTHO05D005127 6.3e-81 304.7 181 81.2
MBI10_g27857_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 1.6e-79 300.1 204 75.0
CBR_g26489 Chara braunii HOM05D004007 ORTHO05D005127 4.7e-76 288.5 217 62.2
vmacro14809 Vaccinium macrocarpon HOM05D004007 ORTHO05D005127 1.0e-70 270.8 243 61.7
Sed0026875 Sechium edule HOM05D004007 ORTHO05D005127 3.7e-65 252.3 245 60.4
PRCOL_00006943 Prasinoderma coloniale HOM05D004007 ORTHO05D005127 2.3e-62 243.0 212 56.6
Cre17.g703700 Chlamydomonas reinhardtii HOM05D004007 ORTHO05D005127 3.0e-62 242.7 223 53.4
QL09p040223 Quercus lobata HOM05D004007 ORTHO05D005127 3.0e-62 242.7 210 65.7
Actinidia25803 Actinidia chinensis HOM05D004007 ORTHO05D005127 4.7e-60 235.3 127 89.8
MCO01G516 Micromonas commoda HOM05D004007 ORTHO05D005127 6.4e-57 224.9 214 50.9
Psat7g041920 Pisum sativum HOM05D004007 ORTHO05D005127 3.2e-56 222.6 127 85.8
Lalb_Chr21g0314021 Lupinus albus HOM05D004007 ORTHO05D005127 2.7e-55 219.5 127 85.8
Zm00001eb277730 Zea mays HOM05D004007 ORTHO05D005127 3.3e-53 212.6 133 76.7
Psat3g074720 Pisum sativum HOM05D004007 ORTHO05D005127 1.6e-47 193.7 104 90.4
Zm00001eb283930 Zea mays HOM05D004007 ORTHO05D005127 2.1e-47 193.4 119 78.2
Aqoxy7G03385 Aquilegia oxysepala HOM05D004007 ORTHO05D005127 3.4e-42 176.0 149 67.1
Dinv08643 Davidia involucrata HOM05D004007 ORTHO05D005127 3.5e-39 166.0 105 81.0
ECA236G0129 Erigeron canadensis HOM05D004007 ORTHO05D005127 2.1e-36 156.8 95 80.0
CSS0040446 Camellia sinensis var. sinensis HOM05D004007 ORTHO05D005127 6.7e-30 135.2 80 83.8
Haze_26746 Corylus avellana HOM05D004007 ORTHO05D005127 1.1e-29 134.4 178 38.2
Ah.03g147720 Amaranthus hybridus HOM05D004007 ORTHO05D005127 1.1e-27 127.9 81 71.6
Lj2A1145G31 Lonicera japonica HOM05D004007 ORTHO05D005127 5.8e-26 122.1 149 51.7
CiPaw.03G130300 Carya illinoinensis HOM05D004007 ORTHO05D005127 6.0e-23 112.1 69 79.7
MBI10_g13790_MAGBIO Magnolia biondii HOM05D004007 ORTHO05D005127 1.1e-19 101.3 57 82.5
HanXRQChr10g0293611 Helianthus annuus HOM05D004007 ORTHO05D219627 1.2e-15 87.8 97 53.6
Glyma.18G157500 Glycine max HOM05D004007 ORTHO05D005127 2.0e-10 70.5 37 89.2
EL10Ac1g01458 Beta vulgaris HOM05D006505 ORTHO05D008086 1.7e-09 67.4 112 36.6
TAR636G1356 Trochodendron aralioides HOM05D002574 ORTHO05D002797 1.7e-09 67.4 62 54.8
EL10Ac7g17956 Beta vulgaris HOM05D006505 ORTHO05D008086 3.8e-09 66.2 110 36.4
Haze_27401 Corylus avellana HOM05D004007 ORTHO05D005127 9.4e-08 61.6 112 33.9
arahy.Tifrunner.gnm1.ann1.DG289Q Arachis hypogaea HOM05D000064 ORTHO05D004075 6.7e-06 55.5 89 38.2
arahy.Tifrunner.gnm1.ann1.WB2JVN Arachis hypogaea HOM05D002038 ORTHO05D002165 6.7e-06 55.5 89 38.2


User provided reference genes

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