Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1513.1 Carica papaya HOM05D003521 ORTHO05D000476 1.3e-245 852.8 499 100.0
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 1.8e-202 709.5 481 83.8
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 3.4e-201 705.3 471 85.1
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 8.3e-200 700.7 482 85.5
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 5.4e-199 698.0 482 83.6
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 3.5e-198 695.3 485 82.1
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 4.5e-198 694.9 475 83.6
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 1.3e-197 693.3 481 82.7
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 1.7e-197 693.0 475 83.6
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 3.3e-196 688.7 478 82.6
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 1.0e-194 683.7 486 80.5
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 8.9e-194 680.6 486 80.5
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 1.2e-193 680.2 481 81.3
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 9.8e-193 677.2 481 83.4
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 1.7e-192 676.4 486 78.8
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 2.9e-192 675.6 481 80.2
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 4.1e-191 671.8 486 79.8
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 1.2e-190 670.2 486 78.4
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 1.6e-190 669.8 485 82.9
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 1.7e-189 666.4 476 79.8
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 1.7e-189 666.4 485 80.0
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 1.7e-189 666.4 481 83.2
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 5.0e-189 664.8 475 81.5
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 8.6e-189 664.1 476 79.0
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 8.6e-189 664.1 486 81.1
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 1.1e-188 663.7 481 78.8
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 1.5e-188 663.3 476 79.4
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 1.5e-188 663.3 476 79.2
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 1.9e-188 662.9 476 79.4
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 3.3e-188 662.1 486 79.2
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 4.7e-187 658.3 483 79.5
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 1.1e-186 657.1 484 79.3
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 1.4e-186 656.8 507 76.1
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 4.0e-186 655.2 481 77.5
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 2.0e-185 652.9 476 77.9
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 3.4e-185 652.1 486 77.0
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 5.8e-185 651.4 480 77.9
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 7.5e-185 651.0 479 77.9
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 9.8e-185 650.6 480 78.8
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 1.7e-184 649.8 474 78.3
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 2.9e-184 649.0 481 78.6
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 2.9e-184 649.0 481 76.9
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 3.7e-184 648.7 479 78.3
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 6.4e-184 647.9 481 78.0
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 6.4e-184 647.9 483 77.4
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 1.1e-183 647.1 480 77.3
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 1.4e-183 646.7 482 77.6
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 1.9e-183 646.4 470 80.2
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 1.9e-183 646.4 481 78.4
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 2.4e-183 646.0 486 77.4
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 2.4e-183 646.0 481 78.2
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 4.1e-183 645.2 478 77.6
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 4.1e-183 645.2 479 77.9
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 5.4e-183 644.8 479 79.1
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 1.2e-182 643.7 481 77.5
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 1.6e-182 643.3 474 80.4
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 6.0e-182 641.3 474 77.6
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 1.0e-181 640.6 486 77.0
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 2.3e-181 639.4 481 77.8
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 1.1e-180 637.1 481 76.7
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 5.6e-180 634.8 476 77.3
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 2.8e-179 632.5 486 76.3
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 4.7e-179 631.7 485 76.5
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 1.1e-178 630.6 481 76.3
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 2.3e-178 629.4 505 73.3
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 3.1e-178 629.0 481 78.0
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 5.2e-178 628.2 481 76.9
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 1.5e-177 626.7 486 75.5
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 2.0e-177 626.3 484 77.9
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 2.6e-177 625.9 481 76.9
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 3.4e-177 625.5 479 75.8
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 3.4e-177 625.5 481 75.9
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 3.4e-177 625.5 486 78.4
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 9.9e-177 624.0 485 75.7
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 2.2e-176 622.9 485 75.3
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 2.9e-176 622.5 478 75.3
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 4.9e-176 621.7 482 77.6
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 6.4e-176 621.3 482 77.8
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.9e-175 619.8 474 76.8
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 4.1e-175 618.6 482 74.5
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 9.2e-175 617.5 490 74.5
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 9.2e-175 617.5 478 76.8
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 6.0e-174 614.8 482 77.4
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 1.3e-173 613.6 481 77.3
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 1.3e-173 613.6 481 74.4
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 1.3e-173 613.6 504 75.6
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 3.9e-173 612.1 481 74.8
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 4.7e-171 605.1 481 74.4
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 2.4e-170 602.8 478 75.3
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 5.2e-170 601.7 481 73.2
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 8.9e-170 600.9 485 74.0
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.5e-169 600.1 485 74.0
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 1.5e-169 600.1 486 74.1
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 2.0e-169 599.7 457 75.3
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 3.4e-169 599.0 475 76.0
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 4.4e-169 598.6 480 73.3
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 1.3e-168 597.0 482 76.1
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 2.4e-167 592.8 486 73.7
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 1.6e-166 590.1 457 75.3
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 2.1e-166 589.7 481 70.5
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 4.6e-166 588.6 483 72.5
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 1.3e-165 587.0 481 73.2
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 5.1e-165 585.1 481 73.0
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 8.7e-165 584.3 481 75.3
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 1.9e-164 583.2 512 68.0
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 1.1e-162 577.4 482 71.2
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 1.4e-162 577.0 478 70.5
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 1.3e-160 570.5 483 72.9
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 2.9e-160 569.3 485 70.5
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 1.2e-158 563.9 472 72.2
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 2.1e-158 563.1 483 70.2
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 1.0e-157 560.8 477 71.9
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 4.3e-156 555.4 481 69.6
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 7.1e-151 538.1 476 67.6
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 1.9e-148 530.0 478 67.4
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 2.4e-138 496.5 483 63.1
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 3.4e-137 492.7 479 63.9
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 7.9e-134 481.5 540 56.3
HPP92_003835 Vanilla planifolia HOM05D003521 ORTHO05D000476 4.3e-132 475.7 477 63.5
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 1.8e-130 470.3 448 67.4
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 2.5e-127 459.9 480 62.9
Zm00001eb343520 Zea mays HOM05D003521 ORTHO05D000476 1.9e-119 433.7 393 67.4
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 3.9e-117 426.0 492 54.3
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 1.2e-113 414.5 391 63.7
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 2.1e-110 403.7 490 53.5
AagrBONN_evm.TU.Sc2ySwM_344.1927 Anthoceros agrestis HOM05D003521 ORTHO05D000476 2.9e-104 383.3 480 54.4
Pp3c4_15860 Physcomitrium patens HOM05D003521 ORTHO05D000476 2.4e-98 363.6 518 49.0
CBR_g16051 Chara braunii HOM05D003521 ORTHO05D000476 6.3e-91 339.0 492 47.6
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 1.2e-86 324.7 284 70.1
unitig_46.g18558 Utricularia gibba HOM05D003521 ORTHO05D000476 3.4e-76 290.0 433 48.3
CAN.G395.28 Capsicum annuum HOM05D003521 ORTHO05D000476 2.3e-61 240.7 346 50.9
TPR.G5155 Trifolium pratense HOM05D003521 ORTHO05D000476 6.8e-53 212.6 136 88.2
CDE08G0544 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 7.6e-52 209.1 193 63.7
Lsat_1_v5_gn_4_102620 Lactuca sativa HOM05D003521 ORTHO05D000476 4.9e-51 206.5 158 75.3
Ca_01143_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 4.9e-43 179.9 275 48.7
Ca_25389_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.0e-40 172.2 244 50.0
SMO298G0028 Selaginella moellendorffii HOM05D003521 ORTHO05D000476 4.9e-35 153.3 363 35.8
Ca_31247_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.5e-28 131.7 91 80.2
HanXRQChr16g0500831 Helianthus annuus HOM05D003521 ORTHO05D000476 2.2e-27 127.9 87 80.5
TPR.G19044 Trifolium pratense HOM05D003521 ORTHO05D000476 7.1e-26 122.9 111 66.7
arahy.Tifrunner.gnm1.ann1.J2PPD0 Arachis hypogaea HOM05D003521 ORTHO05D000476 1.6e-25 121.7 99 73.7
AagrBONN_evm.TU.Sc2ySwM_344.1934 Anthoceros agrestis HOM05D003521 ORTHO05D000476 3.0e-24 117.5 359 31.5
HanXRQChr11g0325911 Helianthus annuus HOM05D003521 ORTHO05D000476 7.4e-23 112.8 100 67.0
Cre03.g187000 Chlamydomonas reinhardtii HOM05D003521 ORTHO05D000476 2.1e-22 111.3 178 43.8
PRCOL_00000677 Prasinoderma coloniale HOM05D003521 ORTHO05D000476 6.3e-22 109.8 482 28.6
arahy.Tifrunner.gnm1.ann1.SA7FDN Arachis hypogaea HOM05D003521 ORTHO05D000476 4.5e-20 103.6 63 87.3
Ca_16259_v3 Cicer arietinum L. HOM05D001034 ORTHO05D000476 5.5e-18 96.7 73 71.2
CBR_g37651 Chara braunii HOM05D003521 ORTHO05D000476 7.2e-18 96.3 508 26.2
Ca_25015_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 9.3e-18 95.9 89 65.2
Lsat_1_v5_gn_4_102600 Lactuca sativa HOM05D003521 ORTHO05D000476 1.0e-16 92.4 74 71.6
unitig_52.g17085 Utricularia gibba HOM05D003521 ORTHO05D000476 1.8e-16 91.7 225 38.2
BolC1t05061H Brassica oleracea HOM05D003521 ORTHO05D000476 2.3e-16 91.3 75 70.7
TPR.G7293 Trifolium pratense HOM05D003521 ORTHO05D000476 4.3e-15 87.0 178 42.7
PSO596G0006 Papaver somniferum HOM05D003521 ORTHO05D000476 2.2e-14 84.7 65 75.4
PSO596G0043 Papaver somniferum HOM05D003521 ORTHO05D000476 2.2e-14 84.7 65 75.4
Thecc.08G046800 Theobroma cacao HOM05D003521 ORTHO05D000476 2.8e-14 84.3 73 71.2
Mapoly0111s0038 Marchantia polymorpha HOM05D003521 ORTHO05D000476 6.9e-13 79.7 494 25.9
C09p10740 Brassica napus HOM05D003521 ORTHO05D000476 1.2e-12 79.0 75 65.3
AagrBONN_evm.TU.Sc2ySwM_344.1936 Anthoceros agrestis HOM05D003521 ORTHO05D000476 1.7e-11 75.1 154 38.3
MCO14G500 Micromonas commoda HOM05D003521 ORTHO05D000476 5.0e-11 73.6 459 25.7
CARHR212390 Cardamine hirsuta HOM05D003521 ORTHO05D000476 4.2e-10 70.5 81 55.6
Ca_25011_v3 Cicer arietinum L. HOM05D010632 ORTHO05D000013 3.6e-09 67.4 47 74.5
HanXRQChr07g0187491 Helianthus annuus HOM05D003521 ORTHO05D000476 3.6e-09 67.4 79 53.2
MBI19_g34543_MAGBIO Magnolia biondii HOM05D003521 ORTHO05D000476 2.3e-08 64.7 43 81.4
AagrBONN_evm.TU.Sc2ySwM_344.1929 Anthoceros agrestis HOM05D003521 ORTHO05D000476 8.2e-06 56.2 113 40.7


User provided reference genes

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