Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc146.72 Carica papaya HOM05D004611 ORTHO05D005794 9.6e-195 683.3 349 100.0
CiPaw.02G072100 Carya illinoinensis HOM05D004611 ORTHO05D005794 2.6e-139 499.2 331 77.3
QL06p013322 Quercus lobata HOM05D004611 ORTHO05D005794 1.7e-138 496.5 331 76.7
Thecc.04G307400 Theobroma cacao HOM05D004611 ORTHO05D005794 8.2e-138 494.2 322 78.9
Manes.03G208700 Manihot esculenta HOM05D004611 ORTHO05D005794 5.3e-137 491.5 331 76.4
COL.COLO4_34558 Corchorus olitorius HOM05D004611 ORTHO05D005794 9.1e-137 490.7 324 77.8
Prupe.1G111500 Prunus persica HOM05D004611 ORTHO05D005794 9.1e-137 490.7 331 76.4
MD13G1148000 Malus domestica HOM05D004611 ORTHO05D005794 2.0e-136 489.6 331 77.0
Gorai.005G069100 Gossypium raimondii HOM05D004611 ORTHO05D005794 2.7e-136 489.2 319 78.7
Gohir.D02G061400 Gossypium hirsutum HOM05D004611 ORTHO05D005794 1.0e-135 487.3 319 78.1
Duzib151G0109 Durio zibethinus HOM05D004611 ORTHO05D005794 3.8e-135 485.3 330 77.3
MD16G1147800 Malus domestica HOM05D004611 ORTHO05D005794 5.0e-135 485.0 331 76.4
Gohir.A02G056200 Gossypium hirsutum HOM05D004611 ORTHO05D005794 8.5e-135 484.2 319 77.7
FvH4_4g20770 Fragaria vesca HOM05D004611 ORTHO05D005794 3.2e-134 482.3 331 74.0
FAN12G0652 Fragaria x ananassa HOM05D004611 ORTHO05D005794 3.2e-134 482.3 331 74.0
Dinv15127 Davidia involucrata HOM05D004611 ORTHO05D005794 5.5e-134 481.5 331 75.8
FAN07G0444 Fragaria x ananassa HOM05D004611 ORTHO05D005794 5.5e-134 481.5 331 73.7
TAR362G1323 Trochodendron aralioides HOM05D004611 ORTHO05D005794 5.5e-134 481.5 329 75.1
RcHm_v2.0_Chr4g0426211 Rosa chinensis HOM05D004611 ORTHO05D005794 7.2e-134 481.1 331 74.9
Aqoxy2G02628 Aquilegia oxysepala HOM05D004611 ORTHO05D005794 4.0e-132 475.3 340 73.5
GSVIVG01034941001 Vitis vinifera HOM05D004611 ORTHO05D005794 7.5e-131 471.1 330 74.2
PGR004G0015 Punica granatum HOM05D004611 ORTHO05D005794 9.8e-131 470.7 325 76.3
TWI73G0848 Tripterygium wilfordii HOM05D004611 ORTHO05D005794 9.8e-131 470.7 331 73.7
Actinidia02513 Actinidia chinensis HOM05D004611 ORTHO05D005794 2.8e-130 469.2 344 72.7
CSS0006805 Camellia sinensis var. sinensis HOM05D004611 ORTHO05D005794 3.7e-130 468.8 311 77.8
Sabra08G0076500 Salix brachista HOM05D004611 ORTHO05D005794 4.8e-130 468.4 329 74.2
Lalb_Chr18g0058501 Lupinus albus HOM05D004611 ORTHO05D005794 6.3e-130 468.0 329 73.9
PSO675G3276 Papaver somniferum HOM05D004611 ORTHO05D005794 8.3e-130 467.6 309 77.0
THA.LOC104818864 Tarenaya hassleriana HOM05D004611 ORTHO05D005794 8.3e-130 467.6 322 75.5
Ciclev10004185m.g Citrus clementina HOM05D004611 ORTHO05D005794 1.1e-129 467.2 365 69.6
Lj6A696G31 Lonicera japonica HOM05D004611 ORTHO05D005794 1.4e-129 466.8 331 74.0
Cfa015689 Carpinus fangiana HOM05D004611 ORTHO05D005794 1.8e-129 466.5 309 78.0
PSO541G3737 Papaver somniferum HOM05D004611 ORTHO05D005794 4.1e-129 465.3 309 76.7
Potri.008G101200 Populus trichocarpa HOM05D004611 ORTHO05D005794 5.4e-129 464.9 350 70.3
Rhsim02G0001700 Rhododendron simsii HOM05D004611 ORTHO05D005794 1.2e-128 463.8 324 75.0
Atru.chr4.3104 Acer truncatum HOM05D004611 ORTHO05D005794 4.5e-128 461.8 335 73.7
CANSAT78G0742 Cannabis sativa HOM05D004611 ORTHO05D005794 4.5e-128 461.8 327 74.9
Cc03_g00470 Coffea canephora HOM05D004611 ORTHO05D005794 4.5e-128 461.8 324 74.1
TPR.G10113 Trifolium pratense HOM05D004611 ORTHO05D005794 1.0e-127 460.7 331 72.5
Glyma.15G136900 Glycine max HOM05D004611 ORTHO05D005794 1.7e-127 459.9 329 73.3
Eucgr.H04083 Eucalyptus grandis HOM05D004611 ORTHO05D005794 2.2e-127 459.5 323 74.6
arahy.Tifrunner.gnm1.ann1.J0E0JD Arachis hypogaea HOM05D004611 ORTHO05D005794 3.8e-127 458.8 329 72.9
arahy.Tifrunner.gnm1.ann1.VX19JK Arachis hypogaea HOM05D004611 ORTHO05D005794 3.8e-127 458.8 329 72.9
Thhalv10012510m.g Eutrema salsugineum HOM05D004611 ORTHO05D005794 1.1e-126 457.2 330 73.0
CARHR258790 Cardamine hirsuta HOM05D004611 ORTHO05D005794 5.5e-126 454.9 322 73.6
Nn8g40813 Nelumbo nucifera HOM05D004611 ORTHO05D005794 5.5e-126 454.9 329 71.1
vmacro15164 Vaccinium macrocarpon HOM05D004611 ORTHO05D005794 5.5e-126 454.9 332 72.9
Lsat_1_v5_gn_1_40220 Lactuca sativa HOM05D004611 ORTHO05D005794 1.2e-125 453.8 333 71.8
CsaV3_6G000020 Cucumis sativus L. HOM05D004611 ORTHO05D005794 4.7e-125 451.8 316 74.1
Glyma.09G031900 Glycine max HOM05D004611 ORTHO05D005794 4.7e-125 451.8 329 71.1
Psat1g162720 Pisum sativum HOM05D004611 ORTHO05D005794 4.7e-125 451.8 331 71.6
Sp6g11490 Schrenkiella parvula HOM05D004611 ORTHO05D005794 4.7e-125 451.8 314 75.2
Peaxi162Scf00126g01513 Petunia axillaris HOM05D004611 ORTHO05D005794 8.0e-125 451.1 329 71.1
Sc25g0001590 Simmondsia chinensis HOM05D004611 ORTHO05D005794 8.0e-125 451.1 311 74.6
Aa31LG3G6800 Aethionema arabicum HOM05D004611 ORTHO05D005794 1.4e-124 450.3 314 73.9
AL8G23880 Arabidopsis lyrata HOM05D004611 ORTHO05D005794 1.4e-124 450.3 322 73.6
AT5G49930 Arabidopsis thaliana HOM05D004611 ORTHO05D005794 1.8e-124 449.9 322 73.9
EL10Ac3g06291 Beta vulgaris HOM05D004611 ORTHO05D005794 1.8e-124 449.9 347 68.0
Ah.07g203900 Amaranthus hybridus HOM05D004611 ORTHO05D005794 2.3e-124 449.5 330 71.2
BraA03t11969Z Brassica rapa HOM05D004611 ORTHO05D005794 3.0e-124 449.1 314 74.5
Nitab4.5_0000062g0520 Nicotiana tabacum HOM05D004611 ORTHO05D005794 4.0e-124 448.7 329 70.5
BcaC01g04844 Brassica carinata HOM05D004611 ORTHO05D005794 5.2e-124 448.4 314 74.2
C03p33270 Brassica napus HOM05D004611 ORTHO05D005794 5.2e-124 448.4 314 74.2
Carub.0008s0980 Capsella rubella HOM05D004611 ORTHO05D005794 5.2e-124 448.4 322 73.6
Lj6g0013514 Lotus japonicus HOM05D004611 ORTHO05D005794 5.2e-124 448.4 331 71.0
A03p27560 Brassica napus HOM05D004611 ORTHO05D005794 6.8e-124 448.0 314 74.5
Ca_00946_v3 Cicer arietinum L. HOM05D004611 ORTHO05D005794 8.8e-124 447.6 331 71.3
Ca_00952_v3 Cicer arietinum L. HOM05D004611 ORTHO05D005794 8.8e-124 447.6 331 71.3
Haze_00831 Corylus avellana HOM05D004611 ORTHO05D005794 8.8e-124 447.6 333 71.8
BolC3t15649H Brassica oleracea HOM05D004611 ORTHO05D005794 1.2e-123 447.2 314 74.2
MELO3C021251.2 Cucumis melo HOM05D004611 ORTHO05D005794 3.4e-123 445.7 316 73.4
HanXRQChr11g0353941 Helianthus annuus HOM05D004611 ORTHO05D005794 3.4e-123 445.7 331 71.3
Phvul.006G121000 Phaseolus vulgaris HOM05D004611 ORTHO05D005794 5.7e-123 444.9 331 70.4
Sed0020756 Sechium edule HOM05D004611 ORTHO05D005794 7.5e-123 444.5 316 73.1
ClCG06G004360 Citrullus lanatus HOM05D004611 ORTHO05D005794 1.3e-122 443.7 316 72.8
CAN.G179.3 Capsicum annuum HOM05D004611 ORTHO05D005794 2.8e-122 442.6 329 69.9
MBI19_g32689_MAGBIO Magnolia biondii HOM05D004611 ORTHO05D005794 2.8e-122 442.6 309 74.4
Sopen01g023180 Solanum pennellii HOM05D004611 ORTHO05D005794 3.7e-122 442.2 329 69.6
BcaB01g02933 Brassica carinata HOM05D004611 ORTHO05D005794 6.3e-122 441.4 314 73.9
VMungo0540G0237 Vigna mungo HOM05D004611 ORTHO05D005794 8.3e-122 441.0 329 70.5
PGSC0003DMG401001235 Solanum tuberosum HOM05D004611 ORTHO05D005794 1.1e-121 440.7 329 69.9
Solyc01g057850.4 Solanum lycopersicum HOM05D004611 ORTHO05D005794 1.6e-120 436.8 329 69.6
Oeu045272.1 Olea europaea HOM05D004611 ORTHO05D005794 5.9e-120 434.9 331 68.9
MSTRG.21753 Avicennia marina HOM05D004611 ORTHO05D005794 1.3e-119 433.7 329 69.0
AUR62030016 Chenopodium quinoa HOM05D004611 ORTHO05D005794 2.3e-119 433.0 326 68.4
GSVIVG01017617001 Vitis vinifera HOM05D004611 ORTHO05D005794 6.6e-119 431.4 326 69.9
ATR0693G069 Amborella trichopoda HOM05D004611 ORTHO05D005794 1.9e-118 429.9 335 67.2
DCAR_030442 Daucus carota HOM05D004611 ORTHO05D005794 2.1e-117 426.4 331 68.3
Migut.N00024 Erythranthe guttata HOM05D004611 ORTHO05D005794 3.6e-117 425.6 313 71.9
AUR62002591 Chenopodium quinoa HOM05D004611 ORTHO05D005794 6.8e-116 421.4 326 67.8
HPP92_010927 Vanilla planifolia HOM05D004611 ORTHO05D005794 2.4e-113 412.9 321 68.5
CDE02G0179 Ceratophyllum demersum HOM05D004611 ORTHO05D005794 1.2e-112 410.6 315 67.9
DCAR_002526 Daucus carota HOM05D004611 ORTHO05D005794 1.6e-112 410.2 330 64.5
ECA247G1486 Erigeron canadensis HOM05D004611 ORTHO05D005794 4.6e-112 408.7 314 68.8
Actinidia14243 Actinidia chinensis HOM05D004611 ORTHO05D005794 2.3e-111 406.4 323 69.3
SGA_v2.0_scaffold123G33405 Striga asiatica HOM05D004611 ORTHO05D005794 8.6e-111 404.4 352 63.1
Zm00001eb136770 Zea mays HOM05D004611 ORTHO05D005794 1.9e-110 403.3 337 64.4
Os12g0564600 Oryza sativa ssp. japonica HOM05D004611 ORTHO05D005794 2.5e-110 402.9 343 63.3
Pp3c6_29680 Physcomitrium patens HOM05D004611 ORTHO05D005794 1.6e-93 347.1 327 57.5
AagrBONN_evm.TU.Sc2ySwM_344.977 Anthoceros agrestis HOM05D004611 ORTHO05D005794 1.1e-92 344.4 328 55.2
Mapoly0029s0152 Marchantia polymorpha HOM05D004611 ORTHO05D005794 8.9e-92 341.3 356 53.7
CBR_g49302 Chara braunii HOM05D004611 ORTHO05D005794 1.0e-79 301.2 377 46.2
unitig_746.g26903 Utricularia gibba HOM05D004611 ORTHO05D005794 3.0e-79 299.7 321 54.8
SMO356G0321 Selaginella moellendorffii HOM05D004611 ORTHO05D005794 9.6e-78 294.7 319 51.1
SEGI_18823 Sequoiadendron giganteum HOM05D004611 ORTHO05D005794 3.2e-65 253.1 147 85.7
arahy.Tifrunner.gnm1.ann1.PAF7VJ Arachis hypogaea HOM05D004611 ORTHO05D005794 7.1e-65 251.9 149 85.9
PRCOL_00000926 Prasinoderma coloniale HOM05D004611 ORTHO05D005794 9.0e-60 235.0 315 43.8
Actinidia07518 Actinidia chinensis HOM05D004611 ORTHO05D005794 6.3e-53 212.2 185 62.7
FAN17G1213 Fragaria x ananassa HOM05D004611 ORTHO05D005794 3.8e-50 203.0 176 60.8
arahy.Tifrunner.gnm1.ann1.MSK2EL Arachis hypogaea HOM05D004611 ORTHO05D005794 1.1e-49 201.4 113 87.6
Actinidia07517 Actinidia chinensis HOM05D004611 ORTHO05D005794 3.2e-49 199.9 106 94.3
arahy.Tifrunner.gnm1.ann1.631YT7 Arachis hypogaea HOM05D004611 ORTHO05D005794 4.2e-49 199.5 113 86.7
arahy.Tifrunner.gnm1.ann1.N4MQ0H Arachis hypogaea HOM05D004611 ORTHO05D005794 6.1e-48 195.7 113 85.8
arahy.Tifrunner.gnm1.ann1.80REVR Arachis hypogaea HOM05D004611 ORTHO05D005794 1.1e-46 191.4 113 84.1
arahy.Tifrunner.gnm1.ann1.G1FZ3Z Arachis hypogaea HOM05D004611 ORTHO05D005794 1.1e-46 191.4 113 84.1
MCO13G239 Micromonas commoda HOM05D004611 ORTHO05D005794 2.4e-44 183.7 315 35.2
arahy.Tifrunner.gnm1.ann1.KEPZ3C Arachis hypogaea HOM05D004611 ORTHO05D005794 2.0e-43 180.6 109 83.5
arahy.Tifrunner.gnm1.ann1.F9ANIH Arachis hypogaea HOM05D004611 ORTHO05D005794 3.6e-40 169.9 106 83.0
Nitab4.5_0003678g0010 Nicotiana tabacum HOM05D004611 ORTHO05D005794 1.4e-39 167.9 174 51.1
Actinidia25067 Actinidia chinensis HOM05D004611 ORTHO05D005794 1.7e-37 161.0 89 91.0
arahy.Tifrunner.gnm1.ann1.LTB099 Arachis hypogaea HOM05D004611 ORTHO05D005794 1.7e-37 161.0 99 82.8
GSVIVG01017631001 Vitis vinifera HOM05D004611 ORTHO05D005794 1.2e-35 154.8 135 59.3
SEGI_02813 Sequoiadendron giganteum HOM05D004611 ORTHO05D005794 2.6e-27 127.1 197 36.5
arahy.Tifrunner.gnm1.ann1.0CQZ6Z Arachis hypogaea HOM05D000862 ORTHO05D000003 7.5e-22 109.0 75 73.3
Cre17.g734961 Chlamydomonas reinhardtii HOM05D004611 ORTHO05D005794 9.7e-22 108.6 152 44.7
arahy.Tifrunner.gnm1.ann1.R4H24K Arachis hypogaea HOM05D000862 ORTHO05D000003 2.2e-21 107.5 75 72.0
COL.COLO4_13521 Corchorus olitorius HOM05D004611 ORTHO05D005794 1.8e-20 104.4 152 44.7
Cfa025106 Carpinus fangiana HOM05D004611 ORTHO05D005794 2.4e-20 104.0 334 28.7


User provided reference genes

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