Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc142.37 Carica papaya HOM05D002170 ORTHO05D118524 2.3e-135 485.7 273 100.0
SEGI_31632 Sequoiadendron giganteum HOM05D002170 ORTHO05D005003 1.1e-07 61.6 55 56.4
CDE02G0333 Ceratophyllum demersum HOM05D002170 ORTHO05D005003 1.8e-07 60.8 55 54.5
CSS0015318 Camellia sinensis var. sinensis HOM05D002170 ORTHO05D005003 2.4e-07 60.5 55 54.5
CiPaw.07G231100 Carya illinoinensis HOM05D002170 ORTHO05D005003 2.4e-07 60.5 55 54.5
Ciclev10007357m.g Citrus clementina HOM05D002170 ORTHO05D005003 2.4e-07 60.5 55 54.5
COL.COLO4_18962 Corchorus olitorius HOM05D002170 ORTHO05D005003 2.4e-07 60.5 55 54.5
Gohir.A06G109900 Gossypium hirsutum HOM05D002170 ORTHO05D005003 2.4e-07 60.5 55 54.5
Gohir.D06G104300 Gossypium hirsutum HOM05D002170 ORTHO05D005003 2.4e-07 60.5 55 54.5
Gorai.010G119500 Gossypium raimondii HOM05D002170 ORTHO05D005003 2.4e-07 60.5 55 54.5
Potri.006G265700 Populus trichocarpa HOM05D002170 ORTHO05D005003 2.4e-07 60.5 55 54.5
TAR625G0335 Trochodendron aralioides HOM05D002170 ORTHO05D005003 2.4e-07 60.5 51 58.8
Aa31LG3G16300 Aethionema arabicum HOM05D002170 ORTHO05D005003 3.1e-07 60.1 57 52.6
DCAR_004512 Daucus carota HOM05D002170 ORTHO05D005003 3.1e-07 60.1 55 54.5
Dinv10283 Davidia involucrata HOM05D002170 ORTHO05D005003 3.1e-07 60.1 55 54.5
Dinv18466 Davidia involucrata HOM05D002170 ORTHO05D005003 3.1e-07 60.1 55 54.5
Lj7A736G82 Lonicera japonica HOM05D002170 ORTHO05D005003 3.1e-07 60.1 55 54.5
MBI15_g08396_MAGBIO Magnolia biondii HOM05D002170 ORTHO05D005003 3.1e-07 60.1 55 54.5
vmacro16501 Vaccinium macrocarpon HOM05D002170 ORTHO05D005003 3.1e-07 60.1 55 54.5
GSVIVG01035985001 Vitis vinifera HOM05D002170 ORTHO05D005003 3.1e-07 60.1 55 54.5
Atru.chr7.2551 Acer truncatum HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
Actinidia23116 Actinidia chinensis HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
AL6G36690 Arabidopsis lyrata HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
AT5G25060 Arabidopsis thaliana HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
Carub.0006s2289 Capsella rubella HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
CARHR188430 Cardamine hirsuta HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
CiPaw.08G005300 Carya illinoinensis HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
Haze_21390 Corylus avellana HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
Duzib150G1070 Durio zibethinus HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
Duzib168G2019 Durio zibethinus HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
Duzib187G0716 Durio zibethinus HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
Thhalv10003609m.g Eutrema salsugineum HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
FvH4_2g41230 Fragaria vesca HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
FAN15G1846 Fragaria x ananassa HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
FAN20G1225 Fragaria x ananassa HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
FAN27G0183 Fragaria x ananassa HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
Glyma.08G265300 Glycine max HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
Glyma.16G095500 Glycine max HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
Gohir.D08G274700 Gossypium hirsutum HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
Gorai.004G293200 Gossypium raimondii HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
Lj4g0016988 Lotus japonicus HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
Lalb_Chr09g0334601 Lupinus albus HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
MD15G1042300 Malus domestica HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
Manes.03G007500 Manihot esculenta HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
Medtr8g070490 Medicago truncatula HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
Prupe.1G395500 Prunus persica HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
QL02p018561 Quercus lobata HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
RcHm_v2.0_Chr6g0299281 Rosa chinensis HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
Thecc.09G014300 Theobroma cacao HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
TPR.G6144 Trifolium pratense HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
TWI32G0518 Tripterygium wilfordii HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
TWI63G1817 Tripterygium wilfordii HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 54.5
TAR636G2364 Trochodendron aralioides HOM05D002170 ORTHO05D005003 4.1e-07 59.7 55 52.7
Actinidia14137 Actinidia chinensis HOM05D002170 ORTHO05D005003 5.3e-07 59.3 55 52.7
ATR0749G037 Amborella trichopoda HOM05D002170 ORTHO05D005003 5.3e-07 59.3 51 56.9
Gohir.A08G253000 Gossypium hirsutum HOM05D002170 ORTHO05D005003 5.3e-07 59.3 40 70.0
MD08G1054700 Malus domestica HOM05D002170 ORTHO05D005003 5.3e-07 59.3 40 70.0
Manes.16G131000 Manihot esculenta HOM05D002170 ORTHO05D005003 5.3e-07 59.3 55 52.7
Rhsim02G0216100 Rhododendron simsii HOM05D002170 ORTHO05D005003 5.3e-07 59.3 55 52.7
vmacro11266 Vaccinium macrocarpon HOM05D002170 ORTHO05D005003 5.3e-07 59.3 55 52.7
CANSAT11G1789 Cannabis sativa HOM05D002170 ORTHO05D005003 6.9e-07 58.9 55 52.7
Nn8g40047 Nelumbo nucifera HOM05D002170 ORTHO05D005003 6.9e-07 58.9 55 52.7
Potri.018G017200 Populus trichocarpa HOM05D002170 ORTHO05D005003 6.9e-07 58.9 55 52.7
Sabra06G0208300 Salix brachista HOM05D002170 ORTHO05D005003 6.9e-07 58.9 55 52.7
Oeu021911.1 Olea europaea HOM05D002170 ORTHO05D005003 9.0e-07 58.5 55 52.7
PSO063G0760 Papaver somniferum HOM05D002170 ORTHO05D005003 9.0e-07 58.5 55 52.7
PSO782G3858 Papaver somniferum HOM05D002170 ORTHO05D005003 9.0e-07 58.5 55 52.7
Phvul.003G275100 Phaseolus vulgaris HOM05D002170 ORTHO05D005003 9.0e-07 58.5 55 52.7
VMungo0251G1008 Vigna mungo HOM05D002170 ORTHO05D005003 9.0e-07 58.5 55 52.7
Cpa.g.sc148.25 Carica papaya HOM05D002170 ORTHO05D005003 1.2e-06 58.2 55 52.7
Ca_22544_v3 Cicer arietinum L. HOM05D002170 ORTHO05D005003 1.2e-06 58.2 55 52.7
Psat1g044520 Pisum sativum HOM05D002170 ORTHO05D005003 1.2e-06 58.2 55 52.7
MSTRG.25828 Avicennia marina HOM05D002170 ORTHO05D005003 1.5e-06 57.8 55 52.7
Lalb_Chr05g0229031 Lupinus albus HOM05D002170 ORTHO05D005003 1.5e-06 57.8 55 50.9
SalBow4G1870 Salvia bowleyana HOM05D002170 ORTHO05D005003 1.5e-06 57.8 55 52.7
Eucgr.C04040 Eucalyptus grandis HOM05D002170 ORTHO05D005003 2.0e-06 57.4 55 52.7
Hund02267 Selenicereus undatus HOM05D002170 ORTHO05D005003 2.0e-06 57.4 55 52.7
Zm00001eb233960 Zea mays HOM05D002170 ORTHO05D005003 2.0e-06 57.4 55 50.9
Zm00001eb234030 Zea mays HOM05D002170 ORTHO05D005003 2.0e-06 57.4 55 50.9
CARHR202490 Cardamine hirsuta HOM05D002170 ORTHO05D005003 2.6e-06 57.0 57 52.6
ClCG08G013750 Citrullus lanatus HOM05D002170 ORTHO05D005003 2.6e-06 57.0 55 52.7
MELO3C011306.2 Cucumis melo HOM05D002170 ORTHO05D005003 2.6e-06 57.0 55 52.7
Os02g0179900 Oryza sativa ssp. japonica HOM05D002170 ORTHO05D005003 2.6e-06 57.0 55 49.1
PGR044G1237 Punica granatum HOM05D002170 ORTHO05D005003 2.6e-06 57.0 55 50.9
Sc07g0003300 Simmondsia chinensis HOM05D002170 ORTHO05D005003 2.6e-06 57.0 55 52.7
BcaB04g19807 Brassica carinata HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 50.9
BcaC04g23569 Brassica carinata HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 50.9
BcaNung03197 Brassica carinata HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 50.9
A09p06320 Brassica napus HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 50.9
BolC9t53617H Brassica oleracea HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 50.9
BraA09t36277Z Brassica rapa HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 50.9
CAN.G546.1 Capsicum annuum HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 50.9
ECA240G4525 Erigeron canadensis HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 49.1
Migut.E01450 Erythranthe guttata HOM05D002170 ORTHO05D005003 3.4e-06 56.6 74 45.9
HanXRQChr03g0081441 Helianthus annuus HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 49.1
HanXRQChr13g0412271 Helianthus annuus HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 49.1
Lsat_1_v5_gn_5_62020 Lactuca sativa HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 49.1
Nn2g14023 Nelumbo nucifera HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 50.9
Nitab4.5_0000748g0050 Nicotiana tabacum HOM05D002170 ORTHO05D005003 3.4e-06 56.6 53 52.8
Nitab4.5_0000927g0020 Nicotiana tabacum HOM05D002170 ORTHO05D005003 3.4e-06 56.6 53 52.8
Nitab4.5_0001798g0020 Nicotiana tabacum HOM05D002170 ORTHO05D005003 3.4e-06 56.6 53 52.8
Nitab4.5_0001894g0050 Nicotiana tabacum HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 50.9
Nitab4.5_0005295g0020 Nicotiana tabacum HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 50.9
Peaxi162Scf00227g00611 Petunia axillaris HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 50.9
Sp2g22460 Schrenkiella parvula HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 52.7
Solyc03g025280.4 Solanum lycopersicum HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 50.9
Sopen03g004110 Solanum pennellii HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 50.9
SGA_v2.0_scaffold165G38229 Striga asiatica HOM05D002170 ORTHO05D005003 3.4e-06 56.6 55 50.9
AT5G10800 Arabidopsis thaliana HOM05D002170 ORTHO05D005003 4.5e-06 56.2 57 50.9
Cc08_g07300 Coffea canephora HOM05D002170 ORTHO05D005003 4.5e-06 56.2 55 50.9
Oeu009655.1 Olea europaea HOM05D002170 ORTHO05D005003 4.5e-06 56.2 55 50.9
Sp6g32650 Schrenkiella parvula HOM05D002170 ORTHO05D005003 5.9e-06 55.8 57 50.9
unitig_0.g2818 Utricularia gibba HOM05D002170 ORTHO05D005003 5.9e-06 55.8 55 50.9
EL10Ac7g17340 Beta vulgaris HOM05D002170 ORTHO05D005003 7.7e-06 55.5 40 65.0
CsaV3_2G032530 Cucumis sativus L. HOM05D002170 ORTHO05D005003 7.7e-06 55.5 55 50.9
Peaxi162Scf00688g00229 Petunia axillaris HOM05D002170 ORTHO05D005003 7.7e-06 55.5 55 49.1
Thhalv10012641m.g Eutrema salsugineum HOM05D002170 ORTHO05D005003 1.0e-05 55.1 57 49.1


User provided reference genes

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