Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1367.1 Carica papaya HOM05D001987 ORTHO05D006514 5.6e-25 116.7 55 100.0
Peaxi162Scf01098g00013 Petunia axillaris HOM05D001987 ORTHO05D006514 1.4e-23 112.1 54 96.3
Solyc00g500100.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.4e-23 112.1 54 96.3
Solyc00g500117.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.4e-23 112.1 54 96.3
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.4e-23 112.1 54 96.3
Solyc00g500274.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 1.4e-23 112.1 54 96.3
Hma1.2p1_0105F.1_g050680 Hydrangea macrophylla HOM05D001987 ORTHO05D006514 2.4e-23 111.3 55 94.5
Cfa023008 Carpinus fangiana HOM05D001987 ORTHO05D006514 3.1e-23 110.9 55 92.7
CANSAT16G0046 Cannabis sativa HOM05D001987 ORTHO05D006514 4.0e-23 110.5 55 94.5
DCAR_032448 Daucus carota HOM05D001987 ORTHO05D006514 5.3e-23 110.2 54 96.3
Dinv06676 Davidia involucrata HOM05D001987 ORTHO05D006514 6.9e-23 109.8 54 94.4
TAR358G0001 Trochodendron aralioides HOM05D001987 ORTHO05D006514 6.9e-23 109.8 54 94.4
Lsat_1_v5_gn_8_132861 Lactuca sativa HOM05D001987 ORTHO05D006514 1.2e-22 109.0 55 92.7
arahy.Tifrunner.gnm1.ann1.8UR9GU Arachis hypogaea HOM05D001987 ORTHO05D006514 2.0e-22 108.2 55 92.7
arahy.Tifrunner.gnm1.ann1.K88Y93 Arachis hypogaea HOM05D001987 ORTHO05D006514 2.0e-22 108.2 55 92.7
arahy.Tifrunner.gnm1.ann1.TY26DT Arachis hypogaea HOM05D001987 ORTHO05D006514 2.0e-22 108.2 55 92.7
Solyc00g500309.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.0e-22 108.2 54 94.4
SHI20096 Sapria himalayana HOM05D001987 ORTHO05D006514 2.6e-22 107.8 54 92.6
Lsat_1_v5_gn_0_38040 Lactuca sativa HOM05D001987 ORTHO05D006514 3.4e-22 107.5 54 92.6
Lj2P1221T93 Lonicera japonica HOM05D001987 ORTHO05D006514 4.5e-22 107.1 54 92.6
Lj2P1230T111 Lonicera japonica HOM05D001987 ORTHO05D006514 4.5e-22 107.1 54 92.6
Dinv35896 Davidia involucrata HOM05D001987 ORTHO05D006514 5.8e-22 106.7 54 92.6
LjContig00315g0000313 Lotus japonicus HOM05D001987 ORTHO05D006514 5.8e-22 106.7 54 92.6
Psat7g012480 Pisum sativum HOM05D001987 ORTHO05D006514 5.8e-22 106.7 54 92.6
TPR.G26049 Trifolium pratense HOM05D001987 ORTHO05D006514 5.8e-22 106.7 54 92.6
Eucgr.H02719 Eucalyptus grandis HOM05D001987 ORTHO05D006514 7.6e-22 106.3 55 90.9
CsaV3_UNG208600 Cucumis sativus L. HOM05D001987 ORTHO05D006514 1.0e-21 105.9 54 90.7
SHI29633 Sapria himalayana HOM05D001987 ORTHO05D006514 1.0e-21 105.9 54 90.7
Nitab4.5_0000330g0070 Nicotiana tabacum HOM05D001987 ORTHO05D006514 1.7e-21 105.1 53 90.6
MBI05_g05348_MAGBIO Magnolia biondii HOM05D001987 ORTHO05D006514 3.8e-21 104.0 54 88.9
Sc17g0003730 Simmondsia chinensis HOM05D001987 ORTHO05D006514 3.8e-21 104.0 55 89.1
Hund28418 Selenicereus undatus HOM05D001987 ORTHO05D006514 9.3e-20 99.4 55 87.3
Hund29734 Selenicereus undatus HOM05D001987 ORTHO05D006514 9.3e-20 99.4 55 87.3
Hund29823 Selenicereus undatus HOM05D001987 ORTHO05D006514 9.3e-20 99.4 55 87.3
Hund30343 Selenicereus undatus HOM05D001987 ORTHO05D006514 9.3e-20 99.4 55 87.3
Hund30419 Selenicereus undatus HOM05D001987 ORTHO05D006514 9.3e-20 99.4 55 87.3
Hund30965 Selenicereus undatus HOM05D001987 ORTHO05D006514 9.3e-20 99.4 55 87.3
CDE02G0251 Ceratophyllum demersum HOM05D001987 ORTHO05D006514 1.6e-19 98.6 54 87.0
PSO541G5803 Papaver somniferum HOM05D001987 ORTHO05D006514 6.0e-19 96.7 55 81.8
PSO675G5335 Papaver somniferum HOM05D001987 ORTHO05D006514 6.0e-19 96.7 55 81.8
Hund12658 Selenicereus undatus HOM05D001987 ORTHO05D006514 7.9e-19 96.3 55 85.5
Ah.02g118900 Amaranthus hybridus HOM05D001987 ORTHO05D006514 2.5e-17 91.3 55 78.2
Ah.10g027970 Amaranthus hybridus HOM05D001987 ORTHO05D006514 2.5e-17 91.3 55 78.2
Ah.10g028690 Amaranthus hybridus HOM05D001987 ORTHO05D006514 2.5e-17 91.3 55 78.2
ATR0661G567 Amborella trichopoda HOM05D001987 ORTHO05D006514 2.5e-17 91.3 54 81.5
Solyc05g045840.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 2.8e-16 87.8 54 77.8
Solyc12g038985.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 8.2e-16 86.3 54 79.6
SalBow1G3504 Salvia bowleyana HOM05D001987 ORTHO05D006514 1.8e-15 85.1 42 92.9
SalBow1G4210 Salvia bowleyana HOM05D001987 ORTHO05D006514 1.8e-15 85.1 42 92.9
Solyc05g045920.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 4.0e-15 84.0 44 88.6
SEGI_40200 Sequoiadendron giganteum HOM05D001987 ORTHO05D006514 6.9e-15 83.2 55 72.7
ATMG00090 Arabidopsis thaliana HOM05D001987 ORTHO05D006514 1.2e-14 82.4 53 79.2
unitig_87.g28029 Utricularia gibba HOM05D001987 ORTHO05D006514 1.2e-14 82.4 42 92.9
A04p09400 Brassica napus HOM05D001987 ORTHO05D006514 2.6e-14 81.3 53 79.2
BolSC28t60371H Brassica oleracea HOM05D001987 ORTHO05D006514 2.6e-14 81.3 53 79.2
CARHR282630 Cardamine hirsuta HOM05D001987 ORTHO05D006514 2.6e-14 81.3 53 79.2
CARHR288240 Cardamine hirsuta HOM05D001987 ORTHO05D006514 2.6e-14 81.3 53 79.2
Peaxi162Scf00360g00815 Petunia axillaris HOM05D001987 ORTHO05D006514 2.6e-14 81.3 55 72.7
Nitab4.5_0000309g0180 Nicotiana tabacum HOM05D001987 ORTHO05D005620 7.6e-14 79.7 49 77.6
arahy.Tifrunner.gnm1.ann1.D5EGR1 Arachis hypogaea HOM05D001987 ORTHO05D006514 1.0e-13 79.3 41 90.2
Ca_30750_v3 Cicer arietinum L. HOM05D001987 ORTHO05D006514 1.0e-13 79.3 41 90.2
Nitab4.5_0009561g0020 Nicotiana tabacum HOM05D001987 ORTHO05D006514 4.2e-12 73.9 38 86.8
Psat1g091000 Pisum sativum HOM05D001987 ORTHO05D006514 5.5e-12 73.6 41 82.9
SHI01964 Sapria himalayana HOM05D001987 ORTHO05D006514 1.6e-11 72.0 54 68.5
Lalb_Chr00c21g0405751 Lupinus albus HOM05D001987 ORTHO05D006514 3.5e-11 70.9 35 91.4
Lalb_Chr00c24g0407071 Lupinus albus HOM05D001987 ORTHO05D006514 3.5e-11 70.9 35 91.4
Lalb_Chr11g0070101 Lupinus albus HOM05D001987 ORTHO05D006514 3.5e-11 70.9 35 91.4
arahy.Tifrunner.gnm1.ann1.L3L3JQ Arachis hypogaea HOM05D001987 ORTHO05D006514 4.6e-11 70.5 59 62.7
HanXRQChr05g0147721 Helianthus annuus HOM05D001987 ORTHO05D006514 1.9e-09 65.1 36 83.3
HanXRQChr16g0504311 Helianthus annuus HOM05D001987 ORTHO05D006514 1.9e-09 65.1 36 83.3
HanXRQMTg0579601 Helianthus annuus HOM05D001987 ORTHO05D006514 1.9e-09 65.1 36 83.3
Hund27846 Selenicereus undatus HOM05D001987 ORTHO05D004018 4.3e-09 63.9 51 60.8
ClCG08G015640 Citrullus lanatus HOM05D001987 ORTHO05D006514 2.2e-08 61.6 35 80.0
SGA_v2.0_scaffold255G45472 Striga asiatica HOM05D001987 ORTHO05D006514 2.8e-08 61.2 33 84.8
arahy.Tifrunner.gnm1.ann1.7A4IEF Arachis hypogaea HOM05D001987 ORTHO05D006514 6.3e-08 60.1 31 87.1
Gorai.001G161500 Gossypium raimondii HOM05D001987 ORTHO05D006514 6.3e-08 60.1 28 96.4
Pp3c2_23480 Physcomitrium patens HOM05D001987 ORTHO05D006514 1.4e-07 58.9 41 65.9
Nitab4.5_0000334g0030 Nicotiana tabacum HOM05D001987 ORTHO05D006514 3.1e-07 57.8 33 75.8
Gohir.A13G113500 Gossypium hirsutum HOM05D001987 ORTHO05D006514 5.3e-07 57.0 28 92.9
AagrBONN_evm.TU.Sc2ySwM_362.2082 Anthoceros agrestis HOM05D001987 ORTHO05D006514 1.5e-06 55.5 51 49.0
SGA_v2.0_scaffold245G44435 Striga asiatica HOM05D001987 ORTHO05D006514 7.7e-06 53.1 26 92.3


User provided reference genes

Program Settings