Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc104.20 Carica papaya HOM05D004426 ORTHO05D005417 0.0e+00 1165.2 606 100.0
THA.LOC104816640 Tarenaya hassleriana HOM05D004426 ORTHO05D005417 3.5e-128 463.0 905 39.0
Thhalv10019873m.g Eutrema salsugineum HOM05D004426 ORTHO05D005417 1.8e-127 460.7 900 38.6
AL3G16340 Arabidopsis lyrata HOM05D004426 ORTHO05D005417 6.7e-127 458.8 899 38.6
AT3G05680 Arabidopsis thaliana HOM05D004426 ORTHO05D005417 1.1e-126 458.0 899 38.8
Manes.09G046200 Manihot esculenta HOM05D004426 ORTHO05D005417 1.9e-126 457.2 904 38.3
Carub.0003s0502 Capsella rubella HOM05D004426 ORTHO05D005417 2.5e-126 456.8 902 38.4
CARHR080130 Cardamine hirsuta HOM05D004426 ORTHO05D005417 1.6e-125 454.1 899 37.9
Sp3g04560 Schrenkiella parvula HOM05D004426 ORTHO05D005417 2.1e-125 453.8 904 38.3
BcaB04g19244 Brassica carinata HOM05D004426 ORTHO05D005417 3.7e-125 453.0 901 37.8
A03p34260 Brassica napus HOM05D004426 ORTHO05D005417 3.7e-125 453.0 902 37.7
C03p41680 Brassica napus HOM05D004426 ORTHO05D005417 1.5e-123 447.6 902 37.1
Gorai.009G393700 Gossypium raimondii HOM05D004426 ORTHO05D005417 2.0e-123 447.2 904 38.7
Aa31LG5G16100 Aethionema arabicum HOM05D004426 ORTHO05D005417 2.6e-123 446.8 910 38.8
FvH4_6g20410 Fragaria vesca HOM05D004426 ORTHO05D005417 5.8e-123 445.7 894 37.5
Thecc.05G105900 Theobroma cacao HOM05D004426 ORTHO05D005417 1.3e-122 444.5 904 39.0
BraA03t12600Z Brassica rapa HOM05D004426 ORTHO05D005417 1.7e-122 444.1 906 37.2
RcHm_v2.0_Chr3g0476141 Rosa chinensis HOM05D004426 ORTHO05D005417 8.4e-122 441.8 892 37.3
MD12G1041400 Malus domestica HOM05D004426 ORTHO05D005417 2.5e-121 440.3 892 37.6
Prupe.7G093800 Prunus persica HOM05D004426 ORTHO05D005417 4.2e-121 439.5 892 38.0
PGR004G1788 Punica granatum HOM05D004426 ORTHO05D005417 4.2e-121 439.5 903 36.8
COL.COLO4_29556 Corchorus olitorius HOM05D004426 ORTHO05D005417 7.1e-121 438.7 901 37.6
BolC3t16451H Brassica oleracea HOM05D004426 ORTHO05D005417 2.1e-120 437.2 896 36.8
Atru.chr8.1340 Acer truncatum HOM05D004426 ORTHO05D005417 2.7e-120 436.8 903 37.5
FAN05G5173 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.3e-119 434.5 902 36.9
Ciclev10010887m.g Citrus clementina HOM05D004426 ORTHO05D005417 2.3e-119 433.7 903 37.5
FAN05G1531 Fragaria x ananassa HOM05D004426 ORTHO05D005417 2.3e-119 433.7 902 36.9
MD14G1040500 Malus domestica HOM05D004426 ORTHO05D005417 3.0e-119 433.3 891 36.3
Potri.016G069100 Populus trichocarpa HOM05D004426 ORTHO05D005417 6.7e-119 432.2 900 37.9
GSVIVG01020162001 Vitis vinifera HOM05D004426 ORTHO05D005417 6.7e-119 432.2 905 37.0
FAN09G4366 Fragaria x ananassa HOM05D004426 ORTHO05D005417 1.1e-118 431.4 907 36.7
CANSAT64G0287 Cannabis sativa HOM05D004426 ORTHO05D005417 9.6e-118 428.3 885 37.9
TWI74G0602 Tripterygium wilfordii HOM05D004426 ORTHO05D005417 1.4e-116 424.5 908 36.9
Phvul.007G267500 Phaseolus vulgaris HOM05D004426 ORTHO05D005417 1.8e-116 424.1 902 36.7
Eucgr.A02578 Eucalyptus grandis HOM05D004426 ORTHO05D005417 4.1e-116 422.9 901 36.6
Sabra16G0070000 Salix brachista HOM05D004426 ORTHO05D005417 1.5e-115 421.0 913 36.4
Lalb_Chr06g0172651 Lupinus albus HOM05D004426 ORTHO05D005417 1.0e-114 418.3 902 36.5
Cfa020044 Carpinus fangiana HOM05D004426 ORTHO05D005417 2.9e-114 416.8 913 37.0
Nn6g34673 Nelumbo nucifera HOM05D004426 ORTHO05D005417 5.0e-114 416.0 907 37.4
arahy.Tifrunner.gnm1.ann1.S879XT Arachis hypogaea HOM05D004426 ORTHO05D005417 6.5e-114 415.6 884 37.1
QL07p036440 Quercus lobata HOM05D004426 ORTHO05D005417 8.4e-114 415.2 903 36.4
TAR369G0229 Trochodendron aralioides HOM05D004426 ORTHO05D005417 8.4e-114 415.2 913 36.9
Lj5g0003460 Lotus japonicus HOM05D004426 ORTHO05D005417 1.4e-113 414.5 902 36.4
FAN02G2855 Fragaria x ananassa HOM05D004426 ORTHO05D005417 7.2e-113 412.1 947 35.1
arahy.Tifrunner.gnm1.ann1.C5PQVK Arachis hypogaea HOM05D004426 ORTHO05D005417 1.2e-112 411.4 902 36.1
Aqoxy1G00646 Aquilegia oxysepala HOM05D004426 ORTHO05D005417 4.6e-112 409.5 908 36.6
Haze_20160 Corylus avellana HOM05D004426 ORTHO05D005417 6.1e-112 409.1 944 36.2
TPR.G2812 Trifolium pratense HOM05D004426 ORTHO05D005417 6.1e-112 409.1 902 35.4
Glyma.10G082100 Glycine max HOM05D004426 ORTHO05D005417 1.8e-111 407.5 908 35.4
Glyma.02G195600 Glycine max HOM05D004426 ORTHO05D005417 2.3e-111 407.1 902 36.0
Ca_11691_v3 Cicer arietinum L. HOM05D004426 ORTHO05D005417 8.7e-111 405.2 904 35.4
CiPaw.10G018400 Carya illinoinensis HOM05D004426 ORTHO05D005417 1.1e-110 404.8 904 37.1
Medtr1g056800 Medicago truncatula HOM05D004426 ORTHO05D005417 1.6e-109 401.0 909 36.3
Nitab4.5_0001495g0100 Nicotiana tabacum HOM05D004426 ORTHO05D005417 2.2e-109 400.6 856 35.6
Psat6g115600 Pisum sativum HOM05D004426 ORTHO05D005417 1.1e-108 398.3 933 35.4
PSO384G1970 Papaver somniferum HOM05D004426 ORTHO05D005417 2.4e-108 397.1 921 35.6
Dinv12344 Davidia involucrata HOM05D004426 ORTHO05D005417 5.9e-107 392.5 906 35.8
Dinv31767 Davidia involucrata HOM05D004426 ORTHO05D005417 7.7e-107 392.1 904 36.2
PSO339G1314 Papaver somniferum HOM05D004426 ORTHO05D005417 2.2e-106 390.6 908 35.5
Ah.12g059670 Amaranthus hybridus HOM05D004426 ORTHO05D005417 2.9e-106 390.2 861 36.0
Peaxi162Scf00171g00133 Petunia axillaris HOM05D004426 ORTHO05D005417 1.9e-105 387.5 904 35.0
MELO3C009545.2 Cucumis melo HOM05D004426 ORTHO05D005417 2.5e-105 387.1 893 34.9
MSTRG.5892 Avicennia marina HOM05D004426 ORTHO05D005417 7.2e-105 385.6 904 34.8
Cc06_g06650 Coffea canephora HOM05D004426 ORTHO05D005417 1.2e-104 384.8 903 35.7
Migut.J00694 Erythranthe guttata HOM05D004426 ORTHO05D005417 1.2e-104 384.8 905 34.7
SGA_v2.0_scaffold115G32146 Striga asiatica HOM05D004426 ORTHO05D005417 2.1e-104 384.0 903 34.9
CSS0006601 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 2.7e-104 383.6 900 34.6
CSS0032246 Camellia sinensis var. sinensis HOM05D004426 ORTHO05D005417 2.7e-104 383.6 900 34.6
ClCG10G018280 Citrullus lanatus HOM05D004426 ORTHO05D005417 3.6e-104 383.3 897 35.0
CsaV3_3G038030 Cucumis sativus L. HOM05D004426 ORTHO05D005417 6.1e-104 382.5 893 34.6
unitig_578.g15811 Utricularia gibba HOM05D004426 ORTHO05D005417 7.9e-104 382.1 762 36.9
EL10Ac5g11771 Beta vulgaris HOM05D004426 ORTHO05D005417 1.8e-103 380.9 901 34.5
HanXRQChr13g0398531 Helianthus annuus HOM05D004426 ORTHO05D005417 3.3e-102 376.7 891 35.7
Nitab4.5_0004363g0030 Nicotiana tabacum HOM05D004426 ORTHO05D005417 3.3e-102 376.7 909 35.3
ECA233G4189 Erigeron canadensis HOM05D004426 ORTHO05D005417 1.1e-100 371.7 895 34.7
Sc22g0002960 Simmondsia chinensis HOM05D004426 ORTHO05D005417 2.4e-100 370.5 936 35.3
Actinidia37752 Actinidia chinensis HOM05D004426 ORTHO05D005417 4.1e-100 369.8 906 34.1
Sed0007001 Sechium edule HOM05D004426 ORTHO05D005417 1.5e-99 367.9 896 34.2
Oeu035645.2 Olea europaea HOM05D004426 ORTHO05D005417 2.0e-99 367.5 898 34.2
Lsat_1_v5_gn_6_33801 Lactuca sativa HOM05D004426 ORTHO05D005417 2.6e-99 367.1 896 34.8
Zm00001eb220020 Zea mays HOM05D004426 ORTHO05D005417 1.7e-98 364.4 857 33.5
Solyc03g020020.3 Solanum lycopersicum HOM05D004426 ORTHO05D005417 6.5e-98 362.5 906 34.3
Sopen03g029610 Solanum pennellii HOM05D004426 ORTHO05D005417 8.5e-98 362.1 906 34.3
DCAR_020696 Daucus carota HOM05D004426 ORTHO05D005417 1.9e-97 360.9 901 34.3
ATR0665G194 Amborella trichopoda HOM05D004426 ORTHO05D005417 4.1e-92 343.2 908 32.9
HPP92_005908 Vanilla planifolia HOM05D004426 ORTHO05D005417 4.5e-91 339.7 881 32.1
AUR62040133 Chenopodium quinoa HOM05D004426 ORTHO05D005417 3.6e-88 330.1 876 32.5
Gohir.A04G053650 Gossypium hirsutum HOM05D004426 ORTHO05D005417 4.0e-87 326.6 216 78.7
Gohir.D04G091700 Gossypium hirsutum HOM05D004426 ORTHO05D005417 4.0e-87 326.6 216 78.7
vmacro07479 Vaccinium macrocarpon HOM05D004426 ORTHO05D005417 1.2e-83 315.1 895 31.8
TAR375G1129 Trochodendron aralioides HOM05D004426 ORTHO05D005417 1.2e-80 305.1 222 72.1
VMungo0720G0551 Vigna mungo HOM05D004426 ORTHO05D005417 1.4e-79 301.6 221 71.5
Duzib093G0602 Durio zibethinus HOM05D004426 ORTHO05D005417 4.4e-78 296.6 286 61.9
MBI03_g28304_MAGBIO Magnolia biondii HOM05D004426 ORTHO05D005417 1.6e-75 288.1 210 68.6
CDE04G2905 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 2.7e-72 277.3 222 64.4
AUR62027347 Chenopodium quinoa HOM05D004426 ORTHO05D005417 3.0e-71 273.9 244 60.7
Oeu036110.1 Olea europaea HOM05D004426 ORTHO05D005417 4.4e-70 270.0 222 62.6
Lj1A1205T55 Lonicera japonica HOM05D004426 ORTHO05D005417 6.4e-61 239.6 185 67.6
SEGI_03524 Sequoiadendron giganteum HOM05D004426 ORTHO05D005417 9.2e-60 235.7 221 57.9
Actinidia03882 Actinidia chinensis HOM05D004426 ORTHO05D005417 5.0e-58 229.9 152 75.7
MBI03_g28305_MAGBIO Magnolia biondii HOM05D004426 ORTHO05D005417 1.8e-55 221.5 158 69.6
CDE07G0146 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 3.7e-53 213.8 165 67.3
SHI25008 Sapria himalayana HOM05D004426 ORTHO05D000002 1.2e-48 198.7 196 56.6
FAN14G5903 Fragaria x ananassa HOM05D004426 ORTHO05D005417 2.8e-48 197.6 135 71.9
PGSC0003DMG400015284 Solanum tuberosum HOM05D004426 ORTHO05D005417 8.9e-47 192.6 157 63.7
Rhsim04G0136900 Rhododendron simsii HOM05D004426 ORTHO05D005417 1.9e-44 184.9 711 28.1
Actinidia03991 Actinidia chinensis HOM05D004426 ORTHO05D005417 2.9e-37 161.0 112 72.3
Mapoly0014s0197 Marchantia polymorpha HOM05D004426 ORTHO05D005417 5.1e-34 150.2 168 47.0
RcHm_v2.0_Chr3g0476171 Rosa chinensis HOM05D004426 ORTHO05D005417 3.8e-29 134.0 88 73.9
AagrBONN_evm.TU.Sc2ySwM_368.1933 Anthoceros agrestis HOM05D004426 ORTHO05D005417 3.2e-28 131.0 157 43.3
Rhsim04G0099300 Rhododendron simsii HOM05D004426 ORTHO05D005417 4.6e-27 127.1 124 59.7
Pp3c22_17700 Physcomitrium patens HOM05D004426 ORTHO05D005417 2.8e-24 117.9 117 52.1
SHI25011 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-23 115.9 68 79.4
CDE07G0138 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 3.2e-20 104.4 90 61.1
CBR_g906 Chara braunii HOM05D004426 ORTHO05D005417 4.8e-16 90.5 121 38.8
Mapoly0074s0069 Marchantia polymorpha HOM05D004426 ORTHO05D005417 4.0e-15 87.4 126 38.1
Actinidia03883 Actinidia chinensis HOM05D004426 ORTHO05D005417 5.5e-12 77.0 87 51.7
BNapus_Darmor_BZH_scaffold_118p00130 Brassica napus HOM05D004426 ORTHO05D005417 1.0e-10 72.8 92 51.1
CDE04G3616 Ceratophyllum demersum HOM05D004426 ORTHO05D005417 1.0e-10 72.8 64 60.9


User provided reference genes

Program Settings