Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 0.0e+00 1824.3 901 100.0
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 0.0e+00 1285.4 901 71.1
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 0.0e+00 1273.1 903 70.4
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 0.0e+00 1269.6 906 69.3
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 0.0e+00 1267.3 906 69.1
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 0.0e+00 1266.9 905 69.4
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1262.7 908 69.7
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1257.3 906 69.0
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 0.0e+00 1256.5 906 69.1
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 0.0e+00 1255.7 906 68.9
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 0.0e+00 1253.0 906 68.2
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 0.0e+00 1251.9 905 68.5
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1246.5 908 67.2
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1245.3 905 68.1
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 0.0e+00 1241.1 902 67.7
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 0.0e+00 1239.6 902 68.1
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 0.0e+00 1239.6 906 67.9
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1239.2 902 67.3
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 0.0e+00 1236.9 903 66.8
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 0.0e+00 1233.4 907 66.5
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1226.5 838 71.1
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1226.5 903 67.4
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1214.5 905 66.1
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1208.7 909 66.9
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 0.0e+00 1207.2 909 66.9
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1207.2 909 66.9
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1204.5 909 66.8
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1202.2 909 66.8
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 0.0e+00 1187.6 907 65.5
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 0.0e+00 1186.8 904 64.9
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 0.0e+00 1186.8 901 64.7
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 0.0e+00 1186.4 903 63.9
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 0.0e+00 1175.2 901 64.6
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 0.0e+00 1172.5 901 63.0
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 0.0e+00 1168.3 901 64.8
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 0.0e+00 1156.7 900 63.8
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1147.9 904 63.7
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 0.0e+00 1146.3 903 62.2
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1144.8 822 68.7
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 0.0e+00 1140.6 906 62.0
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 0.0e+00 1139.0 906 62.8
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 0.0e+00 1135.9 906 62.5
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 0.0e+00 1135.2 906 62.5
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 0.0e+00 1129.8 916 62.2
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 0.0e+00 1121.3 915 61.4
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1119.0 905 61.8
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 0.0e+00 1118.6 917 61.6
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 0.0e+00 1114.8 905 62.0
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 0.0e+00 1112.1 902 62.6
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 0.0e+00 1110.5 905 62.0
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 0.0e+00 1110.5 901 62.6
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1110.1 905 61.8
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 0.0e+00 1109.0 854 64.4
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1107.8 912 61.4
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1106.3 829 66.5
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 0.0e+00 1106.3 905 61.2
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 0.0e+00 1102.8 904 60.8
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 0.0e+00 1102.8 901 62.2
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 0.0e+00 1101.3 903 60.5
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 0.0e+00 1100.5 904 61.1
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 0.0e+00 1099.7 903 62.0
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 0.0e+00 1099.3 903 60.9
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 0.0e+00 1096.3 853 63.7
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 0.0e+00 1095.1 904 59.8
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1094.3 902 62.1
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1087.8 907 59.8
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1083.6 927 60.2
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 0.0e+00 1082.8 905 60.2
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1078.5 916 59.1
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 1.2e-311 1072.8 908 60.0
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 1.2e-311 1072.8 908 60.0
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 1.2e-311 1072.8 907 60.5
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 3.6e-310 1068.1 908 60.0
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 3.6e-310 1068.1 909 60.0
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 6.1e-310 1067.4 902 59.2
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 1.8e-309 1065.8 904 59.0
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 1.3e-307 1059.7 901 60.4
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 9.4e-303 1043.5 820 63.8
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 2.7e-302 1042.0 848 61.1
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 3.7e-299 1031.6 906 58.1
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 1.1e-298 1030.0 905 59.1
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 5.9e-297 1024.2 903 58.6
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 1.0e-293 1013.4 672 72.3
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 5.7e-292 1007.7 905 58.8
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 7.5e-284 980.7 905 57.0
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 6.1e-278 961.1 903 56.3
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 2.0e-276 956.1 679 68.6
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 6.6e-272 941.0 919 52.7
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 1.6e-270 936.4 926 52.7
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 4.1e-266 921.8 915 52.6
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 1.2e-265 920.2 921 51.5
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 6.4e-259 897.9 958 50.1
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 1.6e-257 893.3 688 63.8
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 7.8e-257 891.0 712 62.2
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 9.5e-255 884.0 740 59.5
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 1.1e-250 870.5 671 63.9
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 4.6e-233 812.0 853 49.4
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 2.7e-225 786.2 901 50.4
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 1.5e-223 780.4 967 45.5
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 5.9e-204 715.3 926 46.1
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 5.6e-162 575.9 443 66.1
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 1.2e-153 548.1 976 35.2
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 3.5e-140 503.4 376 63.3
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 1.6e-132 478.0 922 33.7
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 1.1e-128 465.3 334 70.7
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 1.1e-128 465.3 774 37.6
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 1.4e-117 428.3 771 34.5
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 3.2e-93 347.4 982 28.3
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 1.6e-92 345.1 313 61.0
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 4.5e-87 327.0 373 49.6
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 2.3e-83 314.7 247 59.1
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 6.3e-81 306.6 302 53.0
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 1.0e-59 236.1 234 52.6
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 4.4e-58 230.7 256 48.4
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 6.1e-52 210.3 963 24.8
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 4.6e-39 167.5 955 24.1
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 9.2e-32 143.3 877 25.1
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 2.8e-28 131.7 1133 21.0
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 1.9e-24 119.0 93 67.7
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 1.2e-23 116.3 93 66.7
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 3.4e-18 98.2 81 50.6
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 5.1e-06 57.8 40 72.5


User provided reference genes

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