Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c46763 Carica papaya HOM05D001165 ORTHO05D001347 8.3e-14 79.0 35 100.0
Atru.chr6.1579 Acer truncatum HOM05D001165 ORTHO05D001347 1.8e-13 77.8 35 97.1
GSVIVG01022685001 Vitis vinifera HOM05D001165 ORTHO05D001347 9.2e-13 75.5 35 94.3
Rhsim11G0027100 Rhododendron simsii HOM05D001165 ORTHO05D001347 2.7e-12 73.9 35 88.6
vmacro23308 Vaccinium macrocarpon HOM05D001165 ORTHO05D001347 2.7e-12 73.9 35 88.6
TWI39G0611 Tripterygium wilfordii HOM05D001165 ORTHO05D001347 3.5e-12 73.6 35 85.7
Sopen08g001440 Solanum pennellii HOM05D001165 ORTHO05D001347 1.0e-11 72.0 35 85.7
Cfa012561 Carpinus fangiana HOM05D001165 ORTHO05D001347 1.7e-11 71.2 35 82.9
Haze_08101 Corylus avellana HOM05D001165 ORTHO05D001347 1.7e-11 71.2 35 82.9
Manes.17G009250 Manihot esculenta HOM05D001165 ORTHO05D001347 2.9e-11 70.5 35 82.9
Thecc.03G314500 Theobroma cacao HOM05D001165 ORTHO05D001347 2.9e-11 70.5 35 85.7
CAN.G137.20 Capsicum annuum HOM05D001165 ORTHO05D001347 5.0e-11 69.7 35 82.9
Duzib205G0741 Durio zibethinus HOM05D001165 ORTHO05D001347 5.0e-11 69.7 35 85.7
Potri.003G100000 Populus trichocarpa HOM05D001165 ORTHO05D001347 5.0e-11 69.7 35 85.7
SGA_v2.0_scaffold96G29049 Striga asiatica HOM05D001165 ORTHO05D001347 5.0e-11 69.7 35 85.7
CiPaw.11G101500 Carya illinoinensis HOM05D001165 ORTHO05D001347 6.6e-11 69.3 35 77.1
Migut.A00577 Erythranthe guttata HOM05D001165 ORTHO05D001347 1.1e-10 68.6 35 80.0
Gohir.A08G152000 Gossypium hirsutum HOM05D001165 ORTHO05D001347 1.1e-10 68.6 35 82.9
Gohir.D08G172950 Gossypium hirsutum HOM05D001165 ORTHO05D001347 1.1e-10 68.6 35 82.9
Gohir.D08G173000 Gossypium hirsutum HOM05D001165 ORTHO05D001347 1.1e-10 68.6 35 82.9
Gorai.004G180200 Gossypium raimondii HOM05D001165 ORTHO05D001347 1.1e-10 68.6 35 82.9
Gorai.004G180300 Gossypium raimondii HOM05D001165 ORTHO05D001347 1.1e-10 68.6 35 82.9
Lj7C130G1 Lonicera japonica HOM05D001165 ORTHO05D001347 1.1e-10 68.6 35 82.9
Nitab4.5_0007729g0020 Nicotiana tabacum HOM05D001165 ORTHO05D001347 1.1e-10 68.6 35 80.0
Prupe.5G024100 Prunus persica HOM05D001165 ORTHO05D001347 1.1e-10 68.6 35 80.0
QL12p000462 Quercus lobata HOM05D001165 ORTHO05D001347 1.1e-10 68.6 35 85.7
ECA246G3701 Erigeron canadensis HOM05D001165 ORTHO05D001347 1.5e-10 68.2 34 85.3
Nitab4.5_0000258g0040 Nicotiana tabacum HOM05D001165 ORTHO05D001347 1.5e-10 68.2 35 80.0
Sabra03G0068000 Salix brachista HOM05D001165 ORTHO05D001347 1.5e-10 68.2 35 80.0
SalBow4G2525 Salvia bowleyana HOM05D001165 ORTHO05D001347 1.5e-10 68.2 35 82.9
Aqoxy3G02035 Aquilegia oxysepala HOM05D001165 ORTHO05D001347 1.9e-10 67.8 34 85.3
MSTRG.25714 Avicennia marina HOM05D001165 ORTHO05D001347 1.9e-10 67.8 35 80.0
ECA240G1280 Erigeron canadensis HOM05D001165 ORTHO05D001347 1.9e-10 67.8 35 82.9
TPR.G31310 Trifolium pratense HOM05D001165 ORTHO05D001347 1.9e-10 67.8 35 77.1
Cc08_g04280 Coffea canephora HOM05D001165 ORTHO05D001347 2.5e-10 67.4 35 77.1
Dinv15838 Davidia involucrata HOM05D001165 ORTHO05D001347 4.3e-10 66.6 35 80.0
Lsat_1_v5_gn_5_63821 Lactuca sativa HOM05D001165 ORTHO05D001347 4.3e-10 66.6 35 80.0
THA.LOC104798456 Tarenaya hassleriana HOM05D001165 ORTHO05D001347 4.3e-10 66.6 31 90.3
Aa31LG6G1730 Aethionema arabicum HOM05D001165 ORTHO05D001347 5.6e-10 66.2 35 80.0
Glyma.16G103500 Glycine max HOM05D001165 ORTHO05D001347 5.6e-10 66.2 35 74.3
Hund11165 Selenicereus undatus HOM05D001165 ORTHO05D001347 5.6e-10 66.2 35 80.0
HanXRQChr17g0553941 Helianthus annuus HOM05D001165 ORTHO05D001347 7.3e-10 65.9 35 80.0
Phvul.003G273100 Phaseolus vulgaris HOM05D001165 ORTHO05D001347 7.3e-10 65.9 35 74.3
Dinv17266 Davidia involucrata HOM05D001165 ORTHO05D001347 1.2e-09 65.1 34 82.4
MD06G1022700 Malus domestica HOM05D001165 ORTHO05D001347 1.2e-09 65.1 35 77.1
PGR031G1844 Punica granatum HOM05D001165 ORTHO05D001347 1.2e-09 65.1 35 77.1
Nn1g02006 Nelumbo nucifera HOM05D001165 ORTHO05D001347 1.6e-09 64.7 34 82.4
AUR62007371 Chenopodium quinoa HOM05D001165 ORTHO05D001347 2.1e-09 64.3 35 71.4
AUR62018618 Chenopodium quinoa HOM05D001165 ORTHO05D001347 2.1e-09 64.3 35 71.4
Ca_22491_v3 Cicer arietinum L. HOM05D001165 ORTHO05D001347 2.1e-09 64.3 35 71.4
Thhalv10024250m.g Eutrema salsugineum HOM05D001165 ORTHO05D001347 2.1e-09 64.3 35 77.1
Eucgr.D02616 Eucalyptus grandis HOM05D001165 ORTHO05D001347 3.6e-09 63.5 35 77.1
AT4G19020 Arabidopsis thaliana HOM05D001165 ORTHO05D001347 4.7e-09 63.2 35 77.1
ClCG10G001140 Citrullus lanatus HOM05D001165 ORTHO05D001347 4.7e-09 63.2 35 74.3
MELO3C013806.2 Cucumis melo HOM05D001165 ORTHO05D001347 4.7e-09 63.2 35 74.3
CsaV3_3G001160 Cucumis sativus L. HOM05D001165 ORTHO05D001347 4.7e-09 63.2 35 74.3
RcHm_v2.0_Chr7g0212911 Rosa chinensis HOM05D001165 ORTHO05D001347 4.7e-09 63.2 35 77.1
FvH4_5g23610 Fragaria vesca HOM05D001165 ORTHO05D001347 6.1e-09 62.8 35 77.1
FAN13G1022 Fragaria x ananassa HOM05D001165 ORTHO05D001347 6.1e-09 62.8 35 77.1
Hma1.2p1_0635F.1_g193170 Hydrangea macrophylla HOM05D001165 ORTHO05D001347 6.1e-09 62.8 35 71.4
VMungo0251G2970 Vigna mungo HOM05D001165 ORTHO05D001347 6.1e-09 62.8 35 71.4
Actinidia14759 Actinidia chinensis HOM05D001165 ORTHO05D001347 8.0e-09 62.4 35 74.3
Migut.F00104 Erythranthe guttata HOM05D001165 ORTHO05D001347 8.0e-09 62.4 34 76.5
Lj4g0005301 Lotus japonicus HOM05D001165 ORTHO05D001347 8.0e-09 62.4 35 71.4
Lsat_1_v5_gn_3_37841 Lactuca sativa HOM05D001165 ORTHO05D001347 1.0e-08 62.0 34 76.5
Lalb_Chr09g0334611 Lupinus albus HOM05D001165 ORTHO05D001347 1.0e-08 62.0 35 71.4
Medtr8g071100 Medicago truncatula HOM05D001165 ORTHO05D001347 1.0e-08 62.0 35 71.4
Sp7g17750 Schrenkiella parvula HOM05D001165 ORTHO05D001347 1.0e-08 62.0 35 71.4
AL7G35120 Arabidopsis lyrata HOM05D001165 ORTHO05D001347 1.4e-08 61.6 35 77.1
arahy.Tifrunner.gnm1.ann1.X5U82M Arachis hypogaea HOM05D001165 ORTHO05D001347 1.4e-08 61.6 35 68.6
FAN08G2742 Fragaria x ananassa HOM05D001165 ORTHO05D001347 1.4e-08 61.6 35 74.3
HanXRQChr17g0541631 Helianthus annuus HOM05D001165 ORTHO05D001347 1.4e-08 61.6 35 74.3
Sed0025306 Sechium edule HOM05D001165 ORTHO05D001347 1.8e-08 61.2 35 71.4
Hund21090 Selenicereus undatus HOM05D001165 ORTHO05D001347 2.3e-08 60.8 34 76.5
SGA_v2.0_scaffold18G08504 Striga asiatica HOM05D001165 ORTHO05D001347 2.3e-08 60.8 34 73.5
CARHR225930 Cardamine hirsuta HOM05D001165 ORTHO05D001347 3.1e-08 60.5 35 74.3
EL10Ac5g11989 Beta vulgaris HOM05D001165 ORTHO05D001347 4.0e-08 60.1 31 77.4
PSO063G3172 Papaver somniferum HOM05D001165 ORTHO05D001347 4.0e-08 60.1 34 73.5
PSO782G3400 Papaver somniferum HOM05D001165 ORTHO05D001347 4.0e-08 60.1 34 73.5
Psat4g110040 Pisum sativum HOM05D001165 ORTHO05D001347 4.0e-08 60.1 35 68.6
HPP92_008382 Vanilla planifolia HOM05D001165 ORTHO05D001347 4.0e-08 60.1 34 73.5
arahy.Tifrunner.gnm1.ann1.LB5LIC Arachis hypogaea HOM05D001165 ORTHO05D001347 5.2e-08 59.7 35 65.7
Carub.0007s2213 Capsella rubella HOM05D001165 ORTHO05D001347 6.8e-08 59.3 35 71.4
Sc19g0000230 Simmondsia chinensis HOM05D001165 ORTHO05D001347 6.8e-08 59.3 31 77.4
GSVIVG01024446001 Vitis vinifera HOM05D001165 ORTHO05D001347 6.8e-08 59.3 34 70.6
BcaC09g51444 Brassica carinata HOM05D001165 ORTHO05D001347 8.9e-08 58.9 35 68.6
BcaNung04019 Brassica carinata HOM05D001165 ORTHO05D001347 8.9e-08 58.9 35 68.6
BcaNung04021 Brassica carinata HOM05D001165 ORTHO05D001347 8.9e-08 58.9 35 68.6
BolC1t01280H Brassica oleracea HOM05D001165 ORTHO05D001347 8.9e-08 58.9 35 68.6
Lj3C889T12 Lonicera japonica HOM05D001165 ORTHO05D001347 8.9e-08 58.9 31 77.4
TAR374G0107 Trochodendron aralioides HOM05D001165 ORTHO05D001347 1.2e-07 58.5 34 70.6
A01p11040 Brassica napus HOM05D001165 ORTHO05D001347 1.5e-07 58.2 35 68.6
BraA01t01051Z Brassica rapa HOM05D001165 ORTHO05D001347 1.5e-07 58.2 35 68.6
AUR62028152 Chenopodium quinoa HOM05D001165 ORTHO05D001347 1.5e-07 58.2 28 85.7
Ah.12g055630 Amaranthus hybridus HOM05D001165 ORTHO05D001347 2.0e-07 57.8 31 71.0
C01p13060 Brassica napus HOM05D001165 ORTHO05D001347 4.4e-07 56.6 35 65.7
Oeu038844.1 Olea europaea HOM05D001165 ORTHO05D001347 4.4e-07 56.6 29 82.8
EL10Ac3g05097 Beta vulgaris HOM05D001165 ORTHO05D001347 5.8e-07 56.2 28 82.1
AUR62005913 Chenopodium quinoa HOM05D001165 ORTHO05D001347 1.3e-06 55.1 28 78.6
Cpa.g.sc27.168 Carica papaya HOM05D001165 ORTHO05D001347 2.2e-06 54.3 34 61.8
HPP92_013308 Vanilla planifolia HOM05D001165 ORTHO05D001347 2.2e-06 54.3 35 62.9
Nn2g15742 Nelumbo nucifera HOM05D001165 ORTHO05D001347 2.9e-06 53.9 34 61.8
Peaxi162Scf00045g00047 Petunia axillaris HOM05D001165 ORTHO05D001347 4.9e-06 53.1 26 84.6
Lj1C1132T6 Lonicera japonica HOM05D001165 ORTHO05D001347 6.4e-06 52.8 35 60.0
SEGI_14348 Sequoiadendron giganteum HOM05D001165 ORTHO05D001347 6.4e-06 52.8 34 61.8


User provided reference genes

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