Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c46116 Carica papaya HOM05D000706 ORTHO05D001633 2.7e-139 499.2 366 100.0
Cpa.g.c41117 Carica papaya HOM05D000706 ORTHO05D001633 6.7e-90 335.1 165 100.0
Duzib132G0594 Durio zibethinus HOM05D000706 ORTHO05D001633 1.1e-39 168.3 369 50.4
Thecc.02G076000 Theobroma cacao HOM05D000706 ORTHO05D001633 3.9e-37 159.8 369 57.2
COL.COLO4_26035 Corchorus olitorius HOM05D000706 ORTHO05D001633 1.2e-33 148.3 357 53.5
Potri.004G161700 Populus trichocarpa HOM05D000706 ORTHO05D001633 4.4e-33 146.4 379 49.3
Sabra04G0108700 Salix brachista HOM05D000706 ORTHO05D001633 8.3e-32 142.1 381 49.3
Potri.009G123800 Populus trichocarpa HOM05D000706 ORTHO05D001633 7.1e-31 139.0 381 48.3
Ciclev10027673m.g Citrus clementina HOM05D000706 ORTHO05D001633 3.5e-30 136.7 366 53.3
Duzib052G0725 Durio zibethinus HOM05D000706 ORTHO05D001633 6.0e-30 136.0 384 49.7
Gohir.A03G198900 Gossypium hirsutum HOM05D000706 ORTHO05D001633 1.1e-28 131.7 371 49.6
Gorai.005G248200 Gossypium raimondii HOM05D000706 ORTHO05D001633 2.1e-27 127.5 370 49.2
Atru.chr5.3136 Acer truncatum HOM05D000706 ORTHO05D001633 3.6e-27 126.7 312 60.9
Gohir.D02G220300 Gossypium hirsutum HOM05D000706 ORTHO05D001633 6.2e-27 125.9 370 47.6
RcHm_v2.0_Chr6g0267521 Rosa chinensis HOM05D000706 ORTHO05D001633 8.1e-27 125.6 374 38.0
Duzib248G0445 Durio zibethinus HOM05D000706 ORTHO05D001633 1.2e-25 121.7 370 45.1
FAN20G0265 Fragaria x ananassa HOM05D000706 ORTHO05D001633 5.8e-25 119.4 374 44.7
TWI75G1073 Tripterygium wilfordii HOM05D000706 ORTHO05D001633 5.8e-25 119.4 371 46.9
FvH4_2g10320 Fragaria vesca HOM05D000706 ORTHO05D001633 2.9e-24 117.1 359 45.4
FAN27G2992 Fragaria x ananassa HOM05D000706 ORTHO05D001633 2.9e-24 117.1 371 42.6
FAN24G0635 Fragaria x ananassa HOM05D000706 ORTHO05D001633 8.4e-24 115.5 359 45.1
MD00G1040500 Malus domestica HOM05D000706 ORTHO05D001633 1.1e-23 115.2 319 36.7
FAN15G1757 Fragaria x ananassa HOM05D000706 ORTHO05D001633 7.1e-23 112.5 376 44.9
Cfa010509 Carpinus fangiana HOM05D000706 ORTHO05D001633 1.2e-22 111.7 325 46.2
Prupe.8G085700 Prunus persica HOM05D000706 ORTHO05D001633 2.7e-22 110.5 349 44.1
MD10G1064000 Malus domestica HOM05D000706 ORTHO05D001633 3.0e-21 107.1 292 35.6
Manes.04G084000 Manihot esculenta HOM05D000706 ORTHO05D001633 1.5e-20 104.8 367 51.8
Haze_03439 Corylus avellana HOM05D000706 ORTHO05D001633 5.6e-20 102.8 339 42.2
Dinv42005 Davidia involucrata HOM05D000706 ORTHO05D001633 2.8e-19 100.5 357 47.6
CiPaw.14G035600 Carya illinoinensis HOM05D000706 ORTHO05D001633 8.4e-16 89.0 359 41.2
CiPaw.14G035800 Carya illinoinensis HOM05D000706 ORTHO05D001633 1.4e-15 88.2 312 50.0
Phvul.009G003300 Phaseolus vulgaris HOM05D000706 ORTHO05D001633 1.4e-15 88.2 317 37.5
Dinv23460 Davidia involucrata HOM05D000706 ORTHO05D001633 1.9e-15 87.8 347 48.1
CANSAT11G1190 Cannabis sativa HOM05D000706 ORTHO05D001633 5.4e-15 86.3 314 38.9
TWI75G0983 Tripterygium wilfordii HOM05D000706 ORTHO05D001633 7.1e-15 85.9 378 41.8
VMungo1309G2301 Vigna mungo HOM05D000706 ORTHO05D001633 2.1e-14 84.3 302 45.0
Thhalv10001877m.g Eutrema salsugineum HOM05D000706 ORTHO05D001633 2.7e-14 84.0 166 33.7
Sp3g29760 Schrenkiella parvula HOM05D000706 ORTHO05D001633 4.6e-14 83.2 179 40.8
BcaB07g31769 Brassica carinata HOM05D000706 ORTHO05D001633 6.0e-14 82.8 179 40.8
BcaC04g23016 Brassica carinata HOM05D000706 ORTHO05D001633 3.0e-13 80.5 177 40.1
ClCG02G004620 Citrullus lanatus HOM05D000706 ORTHO05D001633 3.0e-13 80.5 355 31.5
Carub.0003s3025 Capsella rubella HOM05D000706 ORTHO05D001633 5.1e-13 79.7 188 34.6
CsaV3_7G000340 Cucumis sativus L. HOM05D000706 ORTHO05D001633 1.9e-12 77.8 332 34.3
BcaB03g16364 Brassica carinata HOM05D000706 ORTHO05D001633 3.3e-12 77.0 149 37.6
A09p11010 Brassica napus HOM05D000706 ORTHO05D001633 4.3e-12 76.6 165 35.8
BraA09t36741Z Brassica rapa HOM05D000706 ORTHO05D001633 4.3e-12 76.6 165 35.8
Thhalv10016136m.g Eutrema salsugineum HOM05D000706 ORTHO05D001633 2.1e-11 74.3 185 35.1
Glyma.06G008300 Glycine max HOM05D000706 ORTHO05D001633 3.6e-11 73.6 308 38.0
AT2G16485 Arabidopsis thaliana HOM05D000706 ORTHO05D001633 6.2e-11 72.8 160 34.4
Eucgr.G01725 Eucalyptus grandis HOM05D000706 ORTHO05D001633 8.1e-11 72.4 384 38.8
BcaB07g31761 Brassica carinata HOM05D000706 ORTHO05D001633 2.4e-10 70.9 103 44.7
BcaB07g31767 Brassica carinata HOM05D000706 ORTHO05D001633 2.4e-10 70.9 103 44.7
BolC9t54195H Brassica oleracea HOM05D000706 ORTHO05D001633 2.4e-10 70.9 177 37.3
AL3G52680 Arabidopsis lyrata HOM05D000706 ORTHO05D001633 5.3e-10 69.7 167 33.5
Glyma.04G008500 Glycine max HOM05D000706 ORTHO05D001633 5.3e-10 69.7 291 50.2
MELO3C013424.2 Cucumis melo HOM05D000706 ORTHO05D001633 2.6e-09 67.4 306 37.6
CARHR106710 Cardamine hirsuta HOM05D000706 ORTHO05D001633 9.9e-09 65.5 178 34.3
Rhsim11G0183100 Rhododendron simsii HOM05D000706 ORTHO05D001633 9.9e-09 65.5 164 34.8
C09p13020 Brassica napus HOM05D000706 ORTHO05D001633 2.9e-08 63.9 144 36.1
CSS0041679 Camellia sinensis var. sinensis HOM05D000706 ORTHO05D001633 3.8e-08 63.5 132 36.4
Sed0010303 Sechium edule HOM05D000706 ORTHO05D001633 1.4e-07 61.6 357 30.0
TPR.G32171 Trifolium pratense HOM05D000706 ORTHO05D001633 7.1e-07 59.3 369 32.8
CAN.G145.4 Capsicum annuum HOM05D000706 ORTHO05D001633 9.3e-07 58.9 121 36.4
Psat5g004280 Pisum sativum HOM05D000706 ORTHO05D001633 2.1e-06 57.8 361 34.9
Medtr3g117490 Medicago truncatula HOM05D000706 ORTHO05D001633 2.7e-06 57.4 345 33.9
Hma1.2p1_0851F.1_g228220 Hydrangea macrophylla HOM05D000706 ORTHO05D001633 3.5e-06 57.0 113 37.2
Lj1g0002727 Lotus japonicus HOM05D000706 ORTHO05D001633 6.0e-06 56.2 107 37.4
Sopen11g024220 Solanum pennellii HOM05D000706 ORTHO05D001633 7.9e-06 55.8 129 32.6


User provided reference genes

Program Settings