Gene: Sopen11g024220
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g024220
- Transcript Identifier Sopen11g024220.1
- Gene Type Coding gene
- Location Spenn-ch11 : 58910325-58912602 : positive
Gene Family Information
- ID HOM05D000706
- #Genes/#Species 813/97
- Phylogenetic origin
- ID ORTHO05D001633
- #Genes/#Species 378/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Sopen11g024220.1
Descriptions
- Description nucleic acid binding, zinc ion binding, DNA binding | FUNCTIONS IN: DNA binding, zinc ion binding, nucleic acid binding | INVOLVED IN: histone modification, transcription initiation | LOCATED IN: nucleus | EXPRESSED IN: guard cell, cultured cell | CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type , Zinc finger, PHD-type, conserved site , Plus-3 domain, subgroup , Zinc finger, PHD-type , GYF , SWIB/MDM2 domain , Plus-3 , SWIB domain , Zinc finger, FYVE/PHD-type , Zinc finger, PHD-finger | BEST Arabidopsis thaliana protein match is: DNA binding, zinc ion binding, nucleic acid binding, nucleic acid binding
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding | |
GO:0003677 | ISO | PLAZA Homology (enrichment) | DNA binding | HOM05D000706 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
12.5.1.15.1 | Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.non-canonical RdDM pathway.protein factor (NERD) |