Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c44085 Carica papaya HOM05D005480 ORTHO05D006735 3.0e-89 332.0 194 100.0
CiPaw.01G026500 Carya illinoinensis HOM05D005480 ORTHO05D006735 1.7e-55 219.9 194 71.6
QL06p043724 Quercus lobata HOM05D005480 ORTHO05D006735 5.9e-53 211.5 196 70.9
Sed0026694 Sechium edule HOM05D005480 ORTHO05D006735 1.4e-49 200.3 195 68.7
ClCG01G016580 Citrullus lanatus HOM05D005480 ORTHO05D006735 1.8e-49 199.9 195 68.7
Thecc.01G048100 Theobroma cacao HOM05D005480 ORTHO05D006735 2.3e-49 199.5 195 67.7
Gohir.D12G090600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 2.0e-48 196.4 196 66.8
MELO3C007529.2 Cucumis melo HOM05D005480 ORTHO05D006735 5.7e-48 194.9 194 67.5
Cfa004218 Carpinus fangiana HOM05D005480 ORTHO05D006735 1.3e-47 193.7 184 68.5
CsaV3_6G042900 Cucumis sativus L. HOM05D005480 ORTHO05D006735 1.7e-47 193.4 195 67.2
TPR.G11349 Trifolium pratense HOM05D005480 ORTHO05D006735 1.1e-46 190.7 197 65.0
Eucgr.H01972 Eucalyptus grandis HOM05D005480 ORTHO05D006735 2.0e-45 186.4 197 65.0
PGR102G0042 Punica granatum HOM05D005480 ORTHO05D006735 2.3e-44 183.0 197 65.5
Duzib187G0998 Durio zibethinus HOM05D005480 ORTHO05D006735 8.6e-44 181.0 196 64.3
Duzib147G0741 Durio zibethinus HOM05D005480 ORTHO05D006735 3.3e-43 179.1 196 63.8
MBI16_g19897_MAGBIO Magnolia biondii HOM05D005480 ORTHO05D006735 5.6e-43 178.3 199 62.3
Glyma.01G181500 Glycine max HOM05D005480 ORTHO05D006735 7.3e-43 177.9 194 61.9
TAR625G1062 Trochodendron aralioides HOM05D005480 ORTHO05D006735 9.5e-43 177.6 183 65.0
Ca_24802_v3 Cicer arietinum L. HOM05D005480 ORTHO05D006735 1.2e-42 177.2 196 62.8
Prupe.7G142300 Prunus persica HOM05D005480 ORTHO05D006735 2.8e-42 176.0 196 64.3
Gohir.A12G068600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 4.7e-42 175.3 196 62.8
Gorai.008G072400 Gossypium raimondii HOM05D005480 ORTHO05D006735 1.8e-41 173.3 196 62.8
arahy.Tifrunner.gnm1.ann1.HXIH5S Arachis hypogaea HOM05D005480 ORTHO05D006735 2.0e-40 169.9 167 64.7
Medtr5g018390 Medicago truncatula HOM05D005480 ORTHO05D006735 4.4e-40 168.7 195 60.5
Lj2g0021055 Lotus japonicus HOM05D005480 ORTHO05D006735 1.3e-39 167.2 194 59.3
VMungo1215G2543 Vigna mungo HOM05D005480 ORTHO05D006735 4.9e-39 165.2 194 59.3
CANSAT01G1679 Cannabis sativa HOM05D005480 ORTHO05D006735 1.1e-38 164.1 195 59.5
AUR62001975 Chenopodium quinoa HOM05D005480 ORTHO05D006735 1.1e-38 164.1 194 58.2
RcHm_v2.0_Chr2g0103771 Rosa chinensis HOM05D005480 ORTHO05D006735 1.4e-38 163.7 194 57.7
MD02G1161300 Malus domestica HOM05D005480 ORTHO05D006735 7.0e-38 161.4 195 60.0
Cc07_g05560 Coffea canephora HOM05D005480 ORTHO05D006735 6.0e-37 158.3 194 60.3
DCAR_021432 Daucus carota HOM05D005480 ORTHO05D006735 6.0e-37 158.3 183 61.2
Lj7A20T61 Lonicera japonica HOM05D005480 ORTHO05D006735 7.8e-37 157.9 183 62.3
Potri.007G036600 Populus trichocarpa HOM05D005480 ORTHO05D006735 7.8e-37 157.9 196 58.7
CSS0005424 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 6.6e-36 154.8 194 59.8
CSS0014684 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 6.6e-36 154.8 194 59.8
Dinv39906 Davidia involucrata HOM05D005480 ORTHO05D006735 8.6e-36 154.5 194 59.3
Solyc02g090230.4 Solanum lycopersicum HOM05D005480 ORTHO05D006735 4.3e-35 152.1 195 58.5
Sopen02g034920 Solanum pennellii HOM05D005480 ORTHO05D006735 4.3e-35 152.1 195 58.5
PGSC0003DMG400010074 Solanum tuberosum HOM05D005480 ORTHO05D006735 1.2e-34 150.6 195 58.5
Phvul.002G022500 Phaseolus vulgaris HOM05D005480 ORTHO05D006735 6.2e-34 148.3 181 55.8
TAR381G0420 Trochodendron aralioides HOM05D005480 ORTHO05D006735 6.2e-34 148.3 136 67.6
Psat2g164160 Pisum sativum HOM05D005480 ORTHO05D006735 2.3e-33 146.4 195 57.4
Lj7A18T44 Lonicera japonica HOM05D005480 ORTHO05D006735 3.1e-33 146.0 189 58.2
Hma1.2p1_0546F.1_g176180 Hydrangea macrophylla HOM05D005480 ORTHO05D006735 4.0e-33 145.6 195 57.4
Sc03g0001260 Simmondsia chinensis HOM05D005480 ORTHO05D006735 4.0e-33 145.6 181 56.4
Oeu003952.2 Olea europaea HOM05D005480 ORTHO05D006735 5.2e-33 145.2 183 57.9
Nn6g32121 Nelumbo nucifera HOM05D005480 ORTHO05D006735 1.5e-32 143.7 194 56.7
Peaxi162Scf00993g00022 Petunia axillaris HOM05D005480 ORTHO05D006735 1.5e-32 143.7 195 57.4
COL.COLO4_11327 Corchorus olitorius HOM05D005480 ORTHO05D006735 3.4e-32 142.5 196 56.6
Carub.0007s0332 Capsella rubella HOM05D005480 ORTHO05D006735 7.5e-32 141.4 197 54.8
Sp7g34650 Schrenkiella parvula HOM05D005480 ORTHO05D006735 7.5e-32 141.4 215 53.0
Manes.13G130100 Manihot esculenta HOM05D005480 ORTHO05D006735 1.7e-31 140.2 197 55.8
Sabra07G0032600 Salix brachista HOM05D005480 ORTHO05D006735 2.9e-31 139.4 196 53.6
Haze_15193 Corylus avellana HOM05D005480 ORTHO05D006735 6.4e-31 138.3 184 56.5
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 2.7e-29 132.9 198 51.5
CDE01G0732 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 4.6e-29 132.1 197 54.8
Ciclev10025487m.g Citrus clementina HOM05D005480 ORTHO05D006735 2.3e-28 129.8 194 53.6
MD15G1275400 Malus domestica HOM05D005480 ORTHO05D006735 2.3e-28 129.8 194 53.6
Lalb_Chr09g0322931 Lupinus albus HOM05D005480 ORTHO05D006735 3.0e-28 129.4 200 52.5
THA.LOC104819823 Tarenaya hassleriana HOM05D005480 ORTHO05D006735 3.9e-28 129.0 200 51.0
Hund13586 Selenicereus undatus HOM05D005480 ORTHO05D006735 5.1e-28 128.6 194 51.0
Aqoxy5G01417 Aquilegia oxysepala HOM05D005480 ORTHO05D006735 8.6e-28 127.9 195 50.8
AUR62003828 Chenopodium quinoa HOM05D005480 ORTHO05D006735 8.6e-28 127.9 186 51.6
Dinv26753 Davidia involucrata HOM05D005480 ORTHO05D006735 4.3e-27 125.6 93 77.4
Actinidia12077 Actinidia chinensis HOM05D005480 ORTHO05D006735 7.3e-27 124.8 195 53.8
Psat5g148720 Pisum sativum HOM05D005480 ORTHO05D006735 1.2e-26 124.0 167 49.1
Glyma.11G059700 Glycine max HOM05D005480 ORTHO05D006735 2.8e-26 122.9 194 49.0
ECA232G3160 Erigeron canadensis HOM05D005480 ORTHO05D006735 3.6e-26 122.5 223 48.4
ATR0733G143 Amborella trichopoda HOM05D005480 ORTHO05D006735 1.4e-25 120.6 193 50.3
AL7G13910 Arabidopsis lyrata HOM05D005480 ORTHO05D006735 1.4e-25 120.6 197 49.7
AT4G37130 Arabidopsis thaliana HOM05D005480 ORTHO05D006735 1.4e-25 120.6 197 49.7
FAN23G2977 Fragaria x ananassa HOM05D005480 ORTHO05D006735 4.0e-25 119.0 200 48.5
Aa31LG6G13860 Aethionema arabicum HOM05D005480 ORTHO05D006735 5.2e-25 118.6 93 74.2
arahy.Tifrunner.gnm1.ann1.E9URZA Arachis hypogaea HOM05D005480 ORTHO05D006735 2.0e-24 116.7 181 51.9
HanXRQChr04g0123741 Helianthus annuus HOM05D005480 ORTHO05D006735 3.4e-24 115.9 209 49.3
FAN26G2127 Fragaria x ananassa HOM05D005480 ORTHO05D006735 1.3e-23 114.0 199 47.7
Nitab4.5_0000108g0300 Nicotiana tabacum HOM05D005480 ORTHO05D006735 2.2e-23 113.2 184 51.1
Sabra07G0033400 Salix brachista HOM05D005480 ORTHO05D006735 2.2e-23 113.2 197 48.7
MSTRG.23794 Avicennia marina HOM05D005480 ORTHO05D006735 2.9e-23 112.8 195 50.3
Nitab4.5_0001014g0070 Nicotiana tabacum HOM05D005480 ORTHO05D006735 2.9e-23 112.8 181 51.9
Rhsim02G0168000 Rhododendron simsii HOM05D005480 ORTHO05D006735 2.9e-23 112.8 167 51.5
A08p22500 Brassica napus HOM05D005480 ORTHO05D006735 8.4e-23 111.3 195 49.2
BraA08t34205Z Brassica rapa HOM05D005480 ORTHO05D006735 8.4e-23 111.3 195 49.2
CAN.G836.34 Capsicum annuum HOM05D005480 ORTHO05D006735 1.1e-22 110.9 168 52.4
BcaB03g12366 Brassica carinata HOM05D005480 ORTHO05D006735 2.4e-22 109.8 200 50.0
FvH4_1g14810 Fragaria vesca HOM05D005480 ORTHO05D006735 3.2e-22 109.4 197 46.7
FAN19G1500 Fragaria x ananassa HOM05D005480 ORTHO05D006735 3.2e-22 109.4 197 46.7
Sabra07G0033100 Salix brachista HOM05D005480 ORTHO05D006735 7.1e-22 108.2 196 47.4
Migut.H00485 Erythranthe guttata HOM05D005480 ORTHO05D006735 9.2e-22 107.8 227 44.9
Sabra07G0032900 Salix brachista HOM05D005480 ORTHO05D006735 1.2e-21 107.5 196 47.4
Thhalv10025060m.g Eutrema salsugineum HOM05D005480 ORTHO05D006735 1.6e-21 107.1 197 46.7
vmacro05295 Vaccinium macrocarpon HOM05D005480 ORTHO05D006735 3.5e-21 105.9 176 48.9
BraA01t00184Z Brassica rapa HOM05D005480 ORTHO05D006735 1.7e-20 103.6 199 47.2
PSO170G5089 Papaver somniferum HOM05D005480 ORTHO05D006735 3.9e-20 102.4 198 49.0
A01p01950 Brassica napus HOM05D005480 ORTHO05D006735 6.6e-20 101.7 199 46.7
PSO210G7251 Papaver somniferum HOM05D005480 ORTHO05D006735 1.9e-19 100.1 195 48.7
unitig_899.g14972 Utricularia gibba HOM05D005480 ORTHO05D006735 9.6e-19 97.8 142 52.8
Lsat_1_v5_gn_4_179460 Lactuca sativa HOM05D005480 ORTHO05D006735 1.2e-18 97.4 206 44.7
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 2.8e-18 96.3 72 70.8
BcaNung03510 Brassica carinata HOM05D005480 ORTHO05D006735 1.4e-17 94.0 206 44.2
SHI08751 Sapria himalayana HOM05D005480 ORTHO05D006735 2.4e-17 93.2 168 44.6
CARHR245380 Cardamine hirsuta HOM05D005480 ORTHO05D006735 1.5e-16 90.5 206 43.2
Os09g0453500 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 4.4e-16 89.0 192 41.1
CDE02G2721 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 9.9e-16 87.8 62 74.2
FAN28G0426 Fragaria x ananassa HOM05D005480 ORTHO05D006735 3.8e-15 85.9 197 40.6
SEGI_40098 Sequoiadendron giganteum HOM05D005480 ORTHO05D006735 4.9e-15 85.5 231 38.5
C01p02120 Brassica napus HOM05D005480 ORTHO05D006735 1.9e-14 83.6 206 42.2
SGA_v2.0_scaffold15G07231 Striga asiatica HOM05D005480 ORTHO05D006735 1.9e-14 83.6 176 42.6
BolC3t20222H Brassica oleracea HOM05D005480 ORTHO05D006735 9.3e-14 81.3 200 41.0
BolC1t00204H Brassica oleracea HOM05D005480 ORTHO05D006735 1.6e-13 80.5 198 42.9
BcaC01g00434 Brassica carinata HOM05D005480 ORTHO05D006735 2.7e-13 79.7 201 40.8
C03p79710 Brassica napus HOM05D005480 ORTHO05D006735 2.7e-13 79.7 201 40.8
HPP92_016039 Vanilla planifolia HOM05D005480 ORTHO05D006735 7.8e-13 78.2 45 82.2
Zm00001eb314700 Zea mays HOM05D005480 ORTHO05D006735 1.3e-12 77.4 193 39.9
SGA_v2.0_scaffold135G34951 Striga asiatica HOM05D005480 ORTHO05D006735 1.5e-11 73.9 192 45.3
Ah.03g144040 Amaranthus hybridus HOM05D005480 ORTHO05D006735 1.9e-11 73.6 64 59.4
Mapoly0027s0041 Marchantia polymorpha HOM05D005480 ORTHO05D006735 1.1e-09 67.8 185 42.7
GSVIVG01006101001 Vitis vinifera HOM05D005480 ORTHO05D006735 3.1e-09 66.2 78 60.3
AagrBONN_evm.TU.Sc2ySwM_117.4106 Anthoceros agrestis HOM05D005480 ORTHO05D006735 5.3e-09 65.5 99 43.4
Zm00001eb100530 Zea mays HOM05D005480 ORTHO05D006735 3.4e-08 62.8 190 35.8
Pp3c24_6760 Physcomitrium patens HOM05D005480 ORTHO05D006735 2.4e-06 56.6 173 38.2


User provided reference genes

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