Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c44012 Carica papaya HOM05D004619 ORTHO05D005738 3.8e-84 314.7 150 100.0
Atru.chr7.2086 Acer truncatum HOM05D004619 ORTHO05D005738 5.4e-70 267.7 150 81.3
QL12p041325 Quercus lobata HOM05D004619 ORTHO05D005738 3.9e-68 261.5 149 77.2
Ciclev10007610m.g Citrus clementina HOM05D004619 ORTHO05D005738 5.0e-68 261.2 150 78.7
Haze_21890 Corylus avellana HOM05D004619 ORTHO05D005738 1.1e-67 260.0 150 78.0
Cfa013367 Carpinus fangiana HOM05D004619 ORTHO05D005738 3.3e-67 258.5 150 78.0
GSVIVG01035621001 Vitis vinifera HOM05D004619 ORTHO05D005738 9.5e-67 256.9 150 76.0
Duzib168G0872 Durio zibethinus HOM05D004619 ORTHO05D005738 4.0e-65 251.5 150 76.7
FAN20G0141 Fragaria x ananassa HOM05D004619 ORTHO05D005738 4.0e-65 251.5 150 74.7
THA.LOC104803757 Tarenaya hassleriana HOM05D004619 ORTHO05D005738 1.2e-64 250.0 149 75.8
FvH4_2g35520 Fragaria vesca HOM05D004619 ORTHO05D005738 1.5e-64 249.6 150 74.0
FAN27G0819 Fragaria x ananassa HOM05D004619 ORTHO05D005738 1.5e-64 249.6 150 74.0
RcHm_v2.0_Chr6g0306261 Rosa chinensis HOM05D004619 ORTHO05D005738 2.0e-64 249.2 150 75.3
CiPaw.07G204000 Carya illinoinensis HOM05D004619 ORTHO05D005738 2.6e-64 248.8 150 72.7
Gohir.A06G092700 Gossypium hirsutum HOM05D004619 ORTHO05D005738 2.6e-64 248.8 150 75.3
Dinv27905 Davidia involucrata HOM05D004619 ORTHO05D005738 4.4e-64 248.1 149 73.2
Lj8A581G22 Lonicera japonica HOM05D004619 ORTHO05D005738 5.8e-64 247.7 150 72.0
MD15G1093200 Malus domestica HOM05D004619 ORTHO05D005738 7.5e-64 247.3 150 74.7
Gohir.D06G092300 Gossypium hirsutum HOM05D004619 ORTHO05D005738 9.9e-64 246.9 150 74.7
Gorai.010G106300 Gossypium raimondii HOM05D004619 ORTHO05D005738 9.9e-64 246.9 150 74.7
TAR636G2525 Trochodendron aralioides HOM05D004619 ORTHO05D005738 9.9e-64 246.9 149 73.2
Hma1.2p1_0049F.1_g028570 Hydrangea macrophylla HOM05D004619 ORTHO05D005738 1.7e-63 246.1 149 74.5
Hma1.2p1_0049F.1_g028580 Hydrangea macrophylla HOM05D004619 ORTHO05D005738 1.7e-63 246.1 149 74.5
Prupe.1G448000 Prunus persica HOM05D004619 ORTHO05D005738 1.7e-63 246.1 150 72.7
Actinidia15739 Actinidia chinensis HOM05D004619 ORTHO05D005738 2.2e-63 245.7 149 73.8
CARHR240910 Cardamine hirsuta HOM05D004619 ORTHO05D005738 2.2e-63 245.7 148 75.0
CSS0048446 Camellia sinensis var. sinensis HOM05D004619 ORTHO05D005738 3.7e-63 245.0 149 73.2
Manes.16G075300 Manihot esculenta HOM05D004619 ORTHO05D005738 3.7e-63 245.0 150 74.0
BcaC09g52090 Brassica carinata HOM05D004619 ORTHO05D005738 8.3e-63 243.8 148 75.0
BcaC09g52091 Brassica carinata HOM05D004619 ORTHO05D005738 8.3e-63 243.8 148 75.0
C01p05790 Brassica napus HOM05D004619 ORTHO05D005738 8.3e-63 243.8 148 75.0
BraA01t00511Z Brassica rapa HOM05D004619 ORTHO05D005738 1.4e-62 243.0 148 75.0
CSS0016966 Camellia sinensis var. sinensis HOM05D004619 ORTHO05D005738 1.4e-62 243.0 149 73.2
BolC1t00559H Brassica oleracea HOM05D004619 ORTHO05D005738 1.9e-62 242.7 148 74.3
Ca_12754_v3 Cicer arietinum L. HOM05D004619 ORTHO05D005738 1.9e-62 242.7 150 72.0
Eucgr.C00551 Eucalyptus grandis HOM05D004619 ORTHO05D005738 1.9e-62 242.7 150 73.3
Eucgr.C00596 Eucalyptus grandis HOM05D004619 ORTHO05D005738 1.9e-62 242.7 150 73.3
Thhalv10024536m.g Eutrema salsugineum HOM05D004619 ORTHO05D005738 3.2e-62 241.9 148 74.3
Nn8g39783 Nelumbo nucifera HOM05D004619 ORTHO05D005738 5.4e-62 241.1 149 73.2
Sp7g30680 Schrenkiella parvula HOM05D004619 ORTHO05D005738 5.4e-62 241.1 148 74.3
A01p05370 Brassica napus HOM05D004619 ORTHO05D005738 7.1e-62 240.7 148 74.3
Medtr1g006690 Medicago truncatula HOM05D004619 ORTHO05D005738 7.1e-62 240.7 150 70.7
vmacro05371 Vaccinium macrocarpon HOM05D004619 ORTHO05D005738 7.1e-62 240.7 149 71.8
vmacro23276 Vaccinium macrocarpon HOM05D004619 ORTHO05D005738 7.1e-62 240.7 149 71.8
TPR.G24498 Trifolium pratense HOM05D004619 ORTHO05D005738 1.2e-61 240.0 149 71.1
Oeu031693.1 Olea europaea HOM05D004619 ORTHO05D005738 1.6e-61 239.6 150 70.0
Aa31sc131G40 Aethionema arabicum HOM05D004619 ORTHO05D005738 2.1e-61 239.2 148 72.3
AL7G18800 Arabidopsis lyrata HOM05D004619 ORTHO05D005738 2.1e-61 239.2 148 73.0
AT4G32910 Arabidopsis thaliana HOM05D004619 ORTHO05D005738 2.1e-61 239.2 148 73.6
Carub.0007s0758 Capsella rubella HOM05D004619 ORTHO05D005738 2.1e-61 239.2 148 72.3
Glyma.17G193800 Glycine max HOM05D004619 ORTHO05D005738 2.7e-61 238.8 150 72.0
Psat6g038280 Pisum sativum HOM05D004619 ORTHO05D005738 3.5e-61 238.4 149 71.8
Psat7g196840 Pisum sativum HOM05D004619 ORTHO05D005738 3.5e-61 238.4 149 71.8
CANSAT25G1337 Cannabis sativa HOM05D004619 ORTHO05D005738 4.6e-61 238.0 149 70.5
COL.COLO4_20972 Corchorus olitorius HOM05D004619 ORTHO05D005738 1.0e-60 236.9 150 72.0
Cc08_g09590 Coffea canephora HOM05D004619 ORTHO05D005738 1.3e-60 236.5 148 68.2
Lj1g0001172 Lotus japonicus HOM05D004619 ORTHO05D005738 1.3e-60 236.5 149 71.8
Sabra18G0044100 Salix brachista HOM05D004619 ORTHO05D005738 2.3e-60 235.7 149 70.5
Sabra18G0044200 Salix brachista HOM05D004619 ORTHO05D005738 2.3e-60 235.7 149 70.5
AUR62039705 Chenopodium quinoa HOM05D004619 ORTHO05D005738 3.0e-60 235.3 150 66.0
Lalb_Chr14g0362511 Lupinus albus HOM05D004619 ORTHO05D005738 3.0e-60 235.3 150 69.3
PSO210G6185 Papaver somniferum HOM05D004619 ORTHO05D005738 3.0e-60 235.3 149 69.8
Thecc.09G045500 Theobroma cacao HOM05D004619 ORTHO05D005738 3.0e-60 235.3 150 74.0
arahy.Tifrunner.gnm1.ann1.CES4LM Arachis hypogaea HOM05D004619 ORTHO05D005738 3.9e-60 235.0 149 71.1
arahy.Tifrunner.gnm1.ann1.Z9IJD2 Arachis hypogaea HOM05D004619 ORTHO05D005738 6.6e-60 234.2 149 71.1
Hund19512 Selenicereus undatus HOM05D004619 ORTHO05D005738 8.6e-60 233.8 149 67.8
MSTRG.1660 Avicennia marina HOM05D004619 ORTHO05D005738 2.5e-59 232.3 149 67.1
Sed0007447 Sechium edule HOM05D004619 ORTHO05D005738 2.5e-59 232.3 150 70.7
CDE02G4285 Ceratophyllum demersum HOM05D004619 ORTHO05D005738 5.6e-59 231.1 150 69.3
Sc23g0005210 Simmondsia chinensis HOM05D004619 ORTHO05D005738 5.6e-59 231.1 149 67.8
PSO210G5473 Papaver somniferum HOM05D004619 ORTHO05D005738 9.5e-59 230.3 149 69.1
ATR0705G091 Amborella trichopoda HOM05D004619 ORTHO05D005738 1.6e-58 229.6 149 66.4
EL10Ac2g04016 Beta vulgaris HOM05D004619 ORTHO05D005738 1.6e-58 229.6 149 65.8
MELO3C011139.2 Cucumis melo HOM05D004619 ORTHO05D005738 2.1e-58 229.2 150 68.7
Phvul.001G074000 Phaseolus vulgaris HOM05D004619 ORTHO05D005738 2.1e-58 229.2 150 69.3
Sopen08g020420 Solanum pennellii HOM05D004619 ORTHO05D005738 2.1e-58 229.2 149 67.1
Aqoxy7G03899 Aquilegia oxysepala HOM05D004619 ORTHO05D005738 2.8e-58 228.8 149 70.5
ClCG08G012210 Citrullus lanatus HOM05D004619 ORTHO05D005738 2.8e-58 228.8 150 69.3
HanXRQChr13g0402061 Helianthus annuus HOM05D004619 ORTHO05D005738 2.8e-58 228.8 148 66.2
Lsat_1_v5_gn_6_23120 Lactuca sativa HOM05D004619 ORTHO05D005738 2.8e-58 228.8 148 66.9
CsaV3_2G030840 Cucumis sativus L. HOM05D004619 ORTHO05D005738 4.7e-58 228.0 150 68.7
DCAR_004468 Daucus carota HOM05D004619 ORTHO05D005738 6.2e-58 227.6 149 65.8
Rhsim07G0146900 Rhododendron simsii HOM05D004619 ORTHO05D005738 6.2e-58 227.6 149 69.8
SGA_v2.0_scaffold169G38654 Striga asiatica HOM05D004619 ORTHO05D005738 6.2e-58 227.6 149 66.4
Ah.10g035010 Amaranthus hybridus HOM05D004619 ORTHO05D005738 8.1e-58 227.3 150 65.3
Solyc08g066580.4 Solanum lycopersicum HOM05D004619 ORTHO05D005738 8.1e-58 227.3 149 66.4
CAN.G400.8 Capsicum annuum HOM05D004619 ORTHO05D005738 3.1e-57 225.3 149 65.1
ECA233G0099 Erigeron canadensis HOM05D004619 ORTHO05D005738 3.1e-57 225.3 148 65.5
Nitab4.5_0001515g0010 Nicotiana tabacum HOM05D004619 ORTHO05D005738 3.1e-57 225.3 149 65.8
Migut.E01528 Erythranthe guttata HOM05D004619 ORTHO05D005738 6.8e-57 224.2 149 64.4
SalBow1G6937 Salvia bowleyana HOM05D004619 ORTHO05D005738 8.9e-57 223.8 149 65.1
AUR62009276 Chenopodium quinoa HOM05D004619 ORTHO05D005738 2.6e-56 222.2 150 64.0
Peaxi162Scf00227g00812 Petunia axillaris HOM05D004619 ORTHO05D005738 2.6e-56 222.2 149 64.4
Nitab4.5_0003794g0010 Nicotiana tabacum HOM05D004619 ORTHO05D005738 4.4e-56 221.5 149 64.4
Os01g0746200 Oryza sativa ssp. japonica HOM05D004619 ORTHO05D005738 1.3e-55 219.9 150 65.3
MBI01_g18389_MAGBIO Magnolia biondii HOM05D004619 ORTHO05D005738 1.7e-55 219.5 150 65.3
Zm00001eb152980 Zea mays HOM05D004619 ORTHO05D005738 2.2e-55 219.2 150 64.7
HPP92_005572 Vanilla planifolia HOM05D004619 ORTHO05D005738 1.2e-53 213.4 149 63.1
SHI18685 Sapria himalayana HOM05D004619 ORTHO05D005738 6.9e-49 197.6 123 76.4
Pp3c16_3750 Physcomitrium patens HOM05D004619 ORTHO05D005738 2.3e-44 182.6 147 56.5
Potri.018G044300 Populus trichocarpa HOM05D004619 ORTHO05D005738 6.2e-42 174.5 113 68.1
Mapoly0014s0066 Marchantia polymorpha HOM05D004619 ORTHO05D005738 1.8e-41 172.9 148 52.7
Actinidia14677 Actinidia chinensis HOM05D004619 ORTHO05D005738 3.4e-40 168.7 149 53.7
VMungo0647G0418 Vigna mungo HOM05D004619 ORTHO05D005738 1.6e-37 159.8 107 65.4
PGR031G0242 Punica granatum HOM05D004619 ORTHO05D005738 1.0e-36 157.1 149 51.7
AagrBONN_evm.TU.Sc2ySwM_368.2349 Anthoceros agrestis HOM05D004619 ORTHO05D005738 3.0e-36 155.6 144 52.8
arahy.Tifrunner.gnm1.ann1.2KYU87 Arachis hypogaea HOM05D004619 ORTHO05D005738 9.6e-27 124.0 115 58.3
arahy.Tifrunner.gnm1.ann1.7I309S Arachis hypogaea HOM05D004619 ORTHO05D005738 2.8e-26 122.5 115 58.3
unitig_578.g16586 Utricularia gibba HOM05D004619 ORTHO05D005738 3.7e-26 122.1 82 65.9
arahy.Tifrunner.gnm1.ann1.VKWI5R Arachis hypogaea HOM05D004619 ORTHO05D005738 6.2e-26 121.3 98 64.3
arahy.Tifrunner.gnm1.ann1.EP17SZ Arachis hypogaea HOM05D004619 ORTHO05D005738 1.2e-21 107.1 104 58.7
CBR_g55392 Chara braunii HOM05D000019 ORTHO05D000048 1.8e-17 93.2 115 42.6
Lsat_1_v5_gn_8_1401 Lactuca sativa HOM05D004619 ORTHO05D005738 9.3e-14 80.9 55 65.5
VMungo0647G1361 Vigna mungo HOM05D004619 ORTHO05D005738 1.8e-12 76.6 46 73.9
arahy.Tifrunner.gnm1.ann1.6B1VGR Arachis hypogaea HOM05D004619 ORTHO05D005738 7.7e-08 61.2 104 42.3
Cpa.g.c44533 Carica papaya HOM05D004619 ORTHO05D005738 3.2e-06 55.8 24 100.0
SMO173G0047 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 7.2e-06 54.7 49 46.9
SMO146G0002 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 9.4e-06 54.3 49 46.9
SMO173G0051 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 9.4e-06 54.3 49 46.9


User provided reference genes

Program Settings