Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c42620 Carica papaya HOM05D002168 ORTHO05D002277 1.3e-15 85.1 40 100.0
Aa31LG5G14220 Aethionema arabicum HOM05D002168 ORTHO05D002277 5.6e-14 79.7 40 92.5
BcaC01g04394 Brassica carinata HOM05D002168 ORTHO05D002277 1.2e-13 78.6 40 90.0
A03p33360 Brassica napus HOM05D002168 ORTHO05D002277 1.2e-13 78.6 40 90.0
C03p40600 Brassica napus HOM05D002168 ORTHO05D002277 1.2e-13 78.6 40 90.0
BolC3t16325H Brassica oleracea HOM05D002168 ORTHO05D002277 1.2e-13 78.6 40 90.0
Glyma.16G036100 Glycine max HOM05D002168 ORTHO05D002277 1.6e-13 78.2 40 90.0
Duzib177G0738 Durio zibethinus HOM05D002168 ORTHO05D002277 2.8e-13 77.4 40 92.5
RcHm_v2.0_Chr3g0496111 Rosa chinensis HOM05D002168 ORTHO05D002277 2.8e-13 77.4 40 90.0
COL.COLO4_28639 Corchorus olitorius HOM05D002168 ORTHO05D002277 3.6e-13 77.0 39 92.3
A05p43660 Brassica napus HOM05D002168 ORTHO05D002277 4.7e-13 76.6 40 87.5
C05p63240 Brassica napus HOM05D002168 ORTHO05D002277 4.7e-13 76.6 40 87.5
BolC5t34986H Brassica oleracea HOM05D002168 ORTHO05D002277 4.7e-13 76.6 40 87.5
BraA03t12507Z Brassica rapa HOM05D002168 ORTHO05D002277 4.7e-13 76.6 40 87.5
BraA05t23104Z Brassica rapa HOM05D002168 ORTHO05D002277 4.7e-13 76.6 40 87.5
Eucgr.A02140 Eucalyptus grandis HOM05D002168 ORTHO05D002277 4.7e-13 76.6 40 90.0
arahy.Tifrunner.gnm1.ann1.B3FMDE Arachis hypogaea HOM05D002168 ORTHO05D002277 6.1e-13 76.3 38 89.5
arahy.Tifrunner.gnm1.ann1.V0KP8I Arachis hypogaea HOM05D002168 ORTHO05D002277 6.1e-13 76.3 38 89.5
Lalb_Chr14g0364831 Lupinus albus HOM05D002168 ORTHO05D002277 6.1e-13 76.3 40 90.0
Manes.08G153100 Manihot esculenta HOM05D002168 ORTHO05D002277 6.1e-13 76.3 40 90.0
PGR042G1483 Punica granatum HOM05D002168 ORTHO05D002277 8.0e-13 75.9 40 90.0
VMungo1383G0989 Vigna mungo HOM05D002168 ORTHO05D002277 8.0e-13 75.9 40 90.0
Ah.04g153620 Amaranthus hybridus HOM05D002168 ORTHO05D002277 1.4e-12 75.1 40 87.5
Glyma.19G116700 Glycine max HOM05D002168 ORTHO05D002277 1.4e-12 75.1 40 87.5
TWI32G0897 Tripterygium wilfordii HOM05D002168 ORTHO05D002277 1.4e-12 75.1 40 87.5
BcaB04g19361 Brassica carinata HOM05D002168 ORTHO05D002277 1.8e-12 74.7 40 87.5
CiPaw.09G166700 Carya illinoinensis HOM05D002168 ORTHO05D002277 1.8e-12 74.7 40 87.5
Thhalv10020014m.g Eutrema salsugineum HOM05D002168 ORTHO05D002277 1.8e-12 74.7 40 87.5
Nn2g14555 Nelumbo nucifera HOM05D002168 ORTHO05D002277 1.8e-12 74.7 39 89.7
Os07g0168000 Oryza sativa ssp. japonica HOM05D002168 ORTHO05D002277 1.8e-12 74.7 40 87.5
Prupe.7G014600 Prunus persica HOM05D002168 ORTHO05D002277 1.8e-12 74.7 40 87.5
Sp3g02680 Schrenkiella parvula HOM05D002168 ORTHO05D002277 1.8e-12 74.7 40 87.5
FvH4_1g28580 Fragaria vesca HOM05D002168 ORTHO05D002277 2.3e-12 74.3 40 87.5
FAN19G2763 Fragaria x ananassa HOM05D002168 ORTHO05D002277 2.3e-12 74.3 40 87.5
FAN26G0197 Fragaria x ananassa HOM05D002168 ORTHO05D002277 2.3e-12 74.3 40 87.5
FAN28G1730 Fragaria x ananassa HOM05D002168 ORTHO05D002277 2.3e-12 74.3 40 87.5
Lj1g0016812 Lotus japonicus HOM05D002168 ORTHO05D002277 2.3e-12 74.3 40 87.5
Potri.013G065700 Populus trichocarpa HOM05D002168 ORTHO05D002277 2.3e-12 74.3 40 87.5
Thecc.05G242400 Theobroma cacao HOM05D002168 ORTHO05D002277 2.3e-12 74.3 40 90.0
TAR633G2049 Trochodendron aralioides HOM05D002168 ORTHO05D002277 2.3e-12 74.3 40 90.0
EL10Ac3g06617 Beta vulgaris HOM05D002168 ORTHO05D002277 3.0e-12 73.9 40 85.0
Ca_08312_v3 Cicer arietinum L. HOM05D002168 ORTHO05D002277 3.0e-12 73.9 40 87.5
Medtr7g086640 Medicago truncatula HOM05D002168 ORTHO05D002277 3.0e-12 73.9 40 87.5
MD12G1011400 Malus domestica HOM05D002168 ORTHO05D002277 4.0e-12 73.6 40 85.0
GSVIVG01029958001 Vitis vinifera HOM05D002168 ORTHO05D002277 4.0e-12 73.6 40 87.5
Aqoxy1G00512 Aquilegia oxysepala HOM05D002168 ORTHO05D002277 5.2e-12 73.2 40 87.5
Potri.019G040100 Populus trichocarpa HOM05D002168 ORTHO05D002277 5.2e-12 73.2 40 85.0
TPR.G34788 Trifolium pratense HOM05D002168 ORTHO05D002277 5.2e-12 73.2 40 87.5
MD14G1008000 Malus domestica HOM05D002168 ORTHO05D002277 6.8e-12 72.8 40 85.0
Zm00001eb300920 Zea mays HOM05D002168 ORTHO05D002277 6.8e-12 72.8 39 87.2
Atru.chr2.1517 Acer truncatum HOM05D002168 ORTHO05D002277 8.9e-12 72.4 40 87.5
Gohir.A11G229100 Gossypium hirsutum HOM05D002168 ORTHO05D002277 8.9e-12 72.4 40 87.5
Gohir.D11G241200 Gossypium hirsutum HOM05D002168 ORTHO05D002277 8.9e-12 72.4 40 87.5
Gorai.007G255300 Gossypium raimondii HOM05D002168 ORTHO05D002277 8.9e-12 72.4 40 87.5
AUR62018085 Chenopodium quinoa HOM05D002168 ORTHO05D002277 1.2e-11 72.0 40 85.0
Ciclev10019242m.g Citrus clementina HOM05D002168 ORTHO05D002277 1.5e-11 71.6 40 85.0
Migut.J01542 Erythranthe guttata HOM05D002168 ORTHO05D002277 1.5e-11 71.6 40 85.0
SGA_v2.0_scaffold69G23217 Striga asiatica HOM05D002168 ORTHO05D002277 1.5e-11 71.6 40 85.0
AL3G13510 Arabidopsis lyrata HOM05D002168 ORTHO05D002277 2.0e-11 71.2 40 85.0
AT3G03710 Arabidopsis thaliana HOM05D002168 ORTHO05D002277 2.0e-11 71.2 40 85.0
Carub.0003s0287 Capsella rubella HOM05D002168 ORTHO05D002277 2.0e-11 71.2 40 85.0
MELO3C009794.2 Cucumis melo HOM05D002168 ORTHO05D002277 2.0e-11 71.2 40 82.5
DCAR_016962 Daucus carota HOM05D002168 ORTHO05D002277 2.0e-11 71.2 40 85.0
Sed0008218 Sechium edule HOM05D002168 ORTHO05D002277 2.0e-11 71.2 40 82.5
THA.LOC104802884 Tarenaya hassleriana HOM05D002168 ORTHO05D002277 2.0e-11 71.2 40 85.0
CARHR077770 Cardamine hirsuta HOM05D002168 ORTHO05D002277 2.6e-11 70.9 40 82.5
AUR62032008 Chenopodium quinoa HOM05D002168 ORTHO05D002277 2.6e-11 70.9 40 82.5
Cc06_g21470 Coffea canephora HOM05D002168 ORTHO05D002277 2.6e-11 70.9 40 82.5
Lj1A1072T23 Lonicera japonica HOM05D002168 ORTHO05D002277 2.6e-11 70.9 40 85.0
Psat0s2078g0040 Pisum sativum HOM05D002168 ORTHO05D002277 2.6e-11 70.9 40 82.5
Rhsim03G0049500 Rhododendron simsii HOM05D002168 ORTHO05D002277 3.4e-11 70.5 40 85.0
CSS0041842 Camellia sinensis var. sinensis HOM05D002168 ORTHO05D002277 4.4e-11 70.1 40 85.0
Sabra13G0057400 Salix brachista HOM05D002168 ORTHO05D002277 4.4e-11 70.1 39 84.6
vmacro07652 Vaccinium macrocarpon HOM05D002168 ORTHO05D002277 4.4e-11 70.1 40 82.5
MBI11_g10545_MAGBIO Magnolia biondii HOM05D002168 ORTHO05D002277 7.5e-11 69.3 40 82.5
PSO339G1487 Papaver somniferum HOM05D002168 ORTHO05D002277 7.5e-11 69.3 40 82.5
Sabra19G0050400 Salix brachista HOM05D002168 ORTHO05D002277 7.5e-11 69.3 40 82.5
CAN.G9.1 Capsicum annuum HOM05D002168 ORTHO05D002277 9.8e-11 68.9 39 84.6
Cfa017714 Carpinus fangiana HOM05D002168 ORTHO05D002277 9.8e-11 68.9 40 80.0
Actinidia37819 Actinidia chinensis HOM05D002168 ORTHO05D002277 1.3e-10 68.6 40 82.5
PSO384G3331 Papaver somniferum HOM05D002168 ORTHO05D002277 1.3e-10 68.6 40 82.5
unitig_60.g25486 Utricularia gibba HOM05D002168 ORTHO05D002277 1.3e-10 68.6 40 82.5
Haze_20409 Corylus avellana HOM05D002168 ORTHO05D002277 1.7e-10 68.2 40 80.0
Sopen08g019820 Solanum pennellii HOM05D002168 ORTHO05D002277 1.7e-10 68.2 39 84.6
PGSC0003DMG401007628 Solanum tuberosum HOM05D002168 ORTHO05D002277 1.7e-10 68.2 39 84.6
Peaxi162Scf01421g00012 Petunia axillaris HOM05D002168 ORTHO05D002277 2.2e-10 67.8 39 82.1
ATR0697G078 Amborella trichopoda HOM05D002168 ORTHO05D002277 2.9e-10 67.4 40 80.0
CsaV3_3G040620 Cucumis sativus L. HOM05D002168 ORTHO05D002277 2.9e-10 67.4 40 80.0
Nitab4.5_0005671g0040 Nicotiana tabacum HOM05D002168 ORTHO05D002277 2.9e-10 67.4 39 82.1
Oeu044206.2 Olea europaea HOM05D002168 ORTHO05D002277 2.9e-10 67.4 40 82.5
CDE06G2728 Ceratophyllum demersum HOM05D002168 ORTHO05D002277 3.7e-10 67.0 40 82.5
CDE07G0416 Ceratophyllum demersum HOM05D002168 ORTHO05D002277 3.7e-10 67.0 40 82.5
SalBow6G0718 Salvia bowleyana HOM05D002168 ORTHO05D002277 3.7e-10 67.0 40 80.0
SalBow6G2962 Salvia bowleyana HOM05D002168 ORTHO05D002277 3.7e-10 67.0 40 80.0
Actinidia03921 Actinidia chinensis HOM05D002168 ORTHO05D002277 4.9e-10 66.6 38 81.6
Dinv25043 Davidia involucrata HOM05D002168 ORTHO05D002277 6.4e-10 66.2 40 80.0
Lsat_1_v5_gn_2_103701 Lactuca sativa HOM05D002168 ORTHO05D002277 6.4e-10 66.2 40 82.5
Sc07g0007450 Simmondsia chinensis HOM05D002168 ORTHO05D002277 1.1e-09 65.5 40 80.0
ECA238G2164 Erigeron canadensis HOM05D002168 ORTHO05D002277 1.4e-09 65.1 40 80.0
HPP92_014245 Vanilla planifolia HOM05D002168 ORTHO05D002277 1.4e-09 65.1 40 77.5
HPP92_026507 Vanilla planifolia HOM05D002168 ORTHO05D002277 1.4e-09 65.1 40 77.5
HanXRQChr07g0196271 Helianthus annuus HOM05D002168 ORTHO05D002277 1.8e-09 64.7 40 77.5
Dinv13788 Davidia involucrata HOM05D002168 ORTHO05D002277 3.2e-09 63.9 38 81.6
CBR_g5744 Chara braunii HOM05D002168 ORTHO05D002277 5.4e-09 63.2 39 76.9
AagrBONN_evm.TU.Sc2ySwM_340.482 Anthoceros agrestis HOM05D002168 ORTHO05D002277 7.0e-09 62.8 39 76.9
CBR_g30163 Chara braunii HOM05D002168 ORTHO05D002277 9.2e-09 62.4 39 71.8
Mapoly0041s0034 Marchantia polymorpha HOM05D002168 ORTHO05D002277 1.2e-08 62.0 39 74.4
Pp3c6_15550 Physcomitrium patens HOM05D002168 ORTHO05D002277 4.6e-08 60.1 39 71.8
SMO364G0479 Selaginella moellendorffii HOM05D002168 ORTHO05D002277 2.3e-07 57.8 37 70.3
HanXRQChr15g0496011 Helianthus annuus HOM05D002168 ORTHO05D002277 1.1e-06 55.5 38 73.7


User provided reference genes

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