Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c39914 Carica papaya HOM05D003172 ORTHO05D003708 2.9e-76 288.5 149 100.0
Rhsim03G0000400 Rhododendron simsii HOM05D003172 ORTHO05D003708 2.7e-53 212.2 120 90.0
Dinv37006 Davidia involucrata HOM05D003172 ORTHO05D003708 1.7e-52 209.5 120 88.3
Potri.013G059800 Populus trichocarpa HOM05D003172 ORTHO05D003708 8.6e-52 207.2 120 86.7
Atru.chr2.1318 Acer truncatum HOM05D003172 ORTHO05D003708 1.1e-51 206.8 120 87.5
Atru.chr2.1341 Acer truncatum HOM05D003172 ORTHO05D003708 1.1e-51 206.8 120 87.5
CAN.G662.2 Capsicum annuum HOM05D003172 ORTHO05D003708 1.1e-51 206.8 120 85.8
Dinv14587 Davidia involucrata HOM05D003172 ORTHO05D003708 1.1e-51 206.8 120 86.7
Manes.09G142400 Manihot esculenta HOM05D003172 ORTHO05D003708 1.1e-51 206.8 120 86.7
CiPaw.09G000900 Carya illinoinensis HOM05D003172 ORTHO05D003708 1.5e-51 206.5 120 86.7
ClCG10G013300 Citrullus lanatus HOM05D003172 ORTHO05D003708 1.5e-51 206.5 120 88.3
MELO3C026894.2 Cucumis melo HOM05D003172 ORTHO05D003708 1.5e-51 206.5 120 88.3
CsaV3_3G043330 Cucumis sativus L. HOM05D003172 ORTHO05D003708 1.5e-51 206.5 120 88.3
Migut.K00002 Erythranthe guttata HOM05D003172 ORTHO05D003708 1.5e-51 206.5 120 87.5
Nitab4.5_0000001g0360 Nicotiana tabacum HOM05D003172 ORTHO05D003708 1.9e-51 206.1 120 85.0
QL07p020343 Quercus lobata HOM05D003172 ORTHO05D003708 1.9e-51 206.1 120 86.7
Migut.N01517 Erythranthe guttata HOM05D003172 ORTHO05D003708 2.5e-51 205.7 120 86.7
Sabra19G0041100 Salix brachista HOM05D003172 ORTHO05D003708 4.3e-51 204.9 120 86.7
vmacro09149 Vaccinium macrocarpon HOM05D003172 ORTHO05D003708 4.3e-51 204.9 120 85.8
SGA_v2.0_scaffold274G46522 Striga asiatica HOM05D003172 ORTHO05D003708 5.6e-51 204.5 120 85.8
GSVIVG01033382001 Vitis vinifera HOM05D003172 ORTHO05D003708 5.6e-51 204.5 120 85.8
Cfa016432 Carpinus fangiana HOM05D003172 ORTHO05D003708 7.3e-51 204.1 120 86.7
Hma1.2p1_0183F.1_g080920 Hydrangea macrophylla HOM05D003172 ORTHO05D003708 7.3e-51 204.1 120 86.7
Aqoxy2G00568 Aquilegia oxysepala HOM05D003172 ORTHO05D003708 9.5e-51 203.8 120 86.7
Solyc12g019860.2 Solanum lycopersicum HOM05D003172 ORTHO05D003708 9.5e-51 203.8 120 85.0
Sopen12g010260 Solanum pennellii HOM05D003172 ORTHO05D003708 9.5e-51 203.8 120 85.0
Haze_19406 Corylus avellana HOM05D003172 ORTHO05D003708 1.2e-50 203.4 120 85.8
Nitab4.5_0003153g0030 Nicotiana tabacum HOM05D003172 ORTHO05D003708 1.2e-50 203.4 118 86.4
TAR623G0379 Trochodendron aralioides HOM05D003172 ORTHO05D003708 1.2e-50 203.4 120 85.0
Ah.04g153270 Amaranthus hybridus HOM05D003172 ORTHO05D003708 1.6e-50 203.0 120 85.0
Potri.019G032800 Populus trichocarpa HOM05D003172 ORTHO05D003708 1.6e-50 203.0 120 85.8
Ciclev10018788m.g Citrus clementina HOM05D003172 ORTHO05D003708 2.1e-50 202.6 120 85.8
Eucgr.A02083 Eucalyptus grandis HOM05D003172 ORTHO05D003708 2.1e-50 202.6 120 84.2
MBI11_g10542_MAGBIO Magnolia biondii HOM05D003172 ORTHO05D003708 2.1e-50 202.6 120 85.0
arahy.Tifrunner.gnm1.ann1.1H4ABR Arachis hypogaea HOM05D003172 ORTHO05D003708 3.6e-50 201.8 120 86.7
arahy.Tifrunner.gnm1.ann1.74GIZX Arachis hypogaea HOM05D003172 ORTHO05D003708 3.6e-50 201.8 120 86.7
arahy.Tifrunner.gnm1.ann1.WX09DK Arachis hypogaea HOM05D003172 ORTHO05D003708 3.6e-50 201.8 120 86.7
Manes.08G149400 Manihot esculenta HOM05D003172 ORTHO05D003708 4.7e-50 201.4 120 85.0
Nn2g15889 Nelumbo nucifera HOM05D003172 ORTHO05D003708 4.7e-50 201.4 120 85.0
Prupe.5G242100 Prunus persica HOM05D003172 ORTHO05D003708 4.7e-50 201.4 120 85.8
PGR142G1025 Punica granatum HOM05D003172 ORTHO05D003708 4.7e-50 201.4 120 85.0
Glyma.19G109500 Glycine max HOM05D003172 ORTHO05D003708 6.2e-50 201.1 120 85.8
Peaxi162Scf00076g00918 Petunia axillaris HOM05D003172 ORTHO05D003708 6.2e-50 201.1 120 84.2
Sc19g0006520 Simmondsia chinensis HOM05D003172 ORTHO05D003708 6.2e-50 201.1 120 84.2
Glyma.16G042600 Glycine max HOM05D003172 ORTHO05D003708 8.0e-50 200.7 120 85.8
TAR369G0048 Trochodendron aralioides HOM05D003172 ORTHO05D003708 8.0e-50 200.7 120 83.3
FAN08G0762 Fragaria x ananassa HOM05D003172 ORTHO05D003708 1.1e-49 200.3 120 87.5
FAN13G1822 Fragaria x ananassa HOM05D003172 ORTHO05D003708 1.1e-49 200.3 120 87.5
Gohir.D13G109400 Gossypium hirsutum HOM05D003172 ORTHO05D003708 1.1e-49 200.3 115 88.7
Gorai.013G123000 Gossypium raimondii HOM05D003172 ORTHO05D003708 1.1e-49 200.3 115 88.7
MSTRG.26061 Avicennia marina HOM05D003172 ORTHO05D003708 2.3e-49 199.1 120 82.5
CSS0035842 Camellia sinensis var. sinensis HOM05D003172 ORTHO05D003708 2.3e-49 199.1 120 85.0
FAN04G3171 Fragaria x ananassa HOM05D003172 ORTHO05D003708 2.3e-49 199.1 120 86.7
VMungo0464G1094 Vigna mungo HOM05D003172 ORTHO05D003708 2.3e-49 199.1 120 84.2
Hund24843 Selenicereus undatus HOM05D003172 ORTHO05D003708 3.1e-49 198.7 120 82.5
THA.LOC104801500 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 3.1e-49 198.7 115 86.1
THA.LOC104805751 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 3.1e-49 198.7 115 86.1
THA.LOC104805989 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 3.1e-49 198.7 115 86.1
CDE07G1719 Ceratophyllum demersum HOM05D003172 ORTHO05D003708 4.0e-49 198.4 120 84.2
Duzib177G0131 Durio zibethinus HOM05D003172 ORTHO05D003708 4.0e-49 198.4 115 87.0
RcHm_v2.0_Chr7g0177371 Rosa chinensis HOM05D003172 ORTHO05D003708 4.0e-49 198.4 120 85.8
EL10Ac3g06798 Beta vulgaris HOM05D003172 ORTHO05D003708 5.2e-49 198.0 120 83.3
Duzib106G1828 Durio zibethinus HOM05D003172 ORTHO05D003708 5.2e-49 198.0 111 91.0
Glyma.16G152500 Glycine max HOM05D003172 ORTHO05D003708 5.2e-49 198.0 120 84.2
Gohir.A13G105600 Gossypium hirsutum HOM05D003172 ORTHO05D003708 5.2e-49 198.0 115 87.8
Oeu026879.1 Olea europaea HOM05D003172 ORTHO05D003708 5.2e-49 198.0 120 84.2
VMungo1383G1523 Vigna mungo HOM05D003172 ORTHO05D003708 5.2e-49 198.0 120 85.0
CDE04G1193 Ceratophyllum demersum HOM05D003172 ORTHO05D003708 6.8e-49 197.6 120 84.2
COL.COLO4_13621 Corchorus olitorius HOM05D003172 ORTHO05D003708 6.8e-49 197.6 115 86.1
Lalb_Chr06g0173911 Lupinus albus HOM05D003172 ORTHO05D003708 6.8e-49 197.6 120 82.5
Zm00001eb218410 Zea mays HOM05D003172 ORTHO05D003708 6.8e-49 197.6 120 79.2
ATR0559G169 Amborella trichopoda HOM05D003172 ORTHO05D003708 8.9e-49 197.2 120 82.5
ATR0697G199 Amborella trichopoda HOM05D003172 ORTHO05D003708 8.9e-49 197.2 120 82.5
Glyma.02G071300 Glycine max HOM05D003172 ORTHO05D003708 8.9e-49 197.2 120 82.5
HanXRQChr07g0193171 Helianthus annuus HOM05D003172 ORTHO05D003708 8.9e-49 197.2 120 82.5
Phvul.001G109300 Phaseolus vulgaris HOM05D003172 ORTHO05D003708 1.2e-48 196.8 120 85.0
CANSAT78G1302 Cannabis sativa HOM05D003172 ORTHO05D003708 1.5e-48 196.4 120 83.3
Rhsim04G0086600 Rhododendron simsii HOM05D003172 ORTHO05D003708 1.5e-48 196.4 120 84.2
Thecc.05G292800 Theobroma cacao HOM05D003172 ORTHO05D003708 1.5e-48 196.4 115 85.2
TWI32G0690 Tripterygium wilfordii HOM05D003172 ORTHO05D003708 1.5e-48 196.4 116 85.3
arahy.Tifrunner.gnm1.ann1.TX5S28 Arachis hypogaea HOM05D003172 ORTHO05D003708 2.0e-48 196.1 113 87.6
Lalb_Chr14g0364401 Lupinus albus HOM05D003172 ORTHO05D003708 2.0e-48 196.1 120 82.5
AUR62032669 Chenopodium quinoa HOM05D003172 ORTHO05D003708 2.6e-48 195.7 120 80.8
AUR62035298 Chenopodium quinoa HOM05D003172 ORTHO05D003708 2.6e-48 195.7 120 80.8
Lj2C357G5 Lonicera japonica HOM05D003172 ORTHO05D003708 2.6e-48 195.7 116 86.2
Lalb_Chr21g0317121 Lupinus albus HOM05D003172 ORTHO05D003708 2.6e-48 195.7 120 82.5
MD06G1237800 Malus domestica HOM05D003172 ORTHO05D003708 2.6e-48 195.7 120 85.0
Nn7g35818 Nelumbo nucifera HOM05D003172 ORTHO05D003708 2.6e-48 195.7 120 82.5
Lj1g0020713 Lotus japonicus HOM05D003172 ORTHO05D003708 4.4e-48 194.9 120 83.3
Sed0019950 Sechium edule HOM05D003172 ORTHO05D003708 4.4e-48 194.9 120 82.5
MD14G1244600 Malus domestica HOM05D003172 ORTHO05D003708 5.8e-48 194.5 120 84.2
FvH4_5g18220 Fragaria vesca HOM05D003172 ORTHO05D003708 7.5e-48 194.1 120 86.7
FAN18G2753 Fragaria x ananassa HOM05D003172 ORTHO05D003708 7.5e-48 194.1 120 86.7
Gohir.A11G257900 Gossypium hirsutum HOM05D003172 ORTHO05D003708 7.5e-48 194.1 115 85.2
Gohir.D11G267900 Gossypium hirsutum HOM05D003172 ORTHO05D003708 7.5e-48 194.1 115 85.2
Gorai.007G287600 Gossypium raimondii HOM05D003172 ORTHO05D003708 7.5e-48 194.1 115 85.2
AL6G29440 Arabidopsis lyrata HOM05D003172 ORTHO05D003708 9.8e-48 193.7 115 85.2
AT5G18230 Arabidopsis thaliana HOM05D003172 ORTHO05D003708 9.8e-48 193.7 115 85.2
ECA233G5856 Erigeron canadensis HOM05D003172 ORTHO05D003708 1.3e-47 193.4 120 81.7
Phvul.004G079000 Phaseolus vulgaris HOM05D003172 ORTHO05D003708 2.2e-47 192.6 120 80.0
BcaB08g36694 Brassica carinata HOM05D003172 ORTHO05D003708 2.9e-47 192.2 115 84.3
BcaNung04945 Brassica carinata HOM05D003172 ORTHO05D003708 2.9e-47 192.2 115 84.3
A03p08720 Brassica napus HOM05D003172 ORTHO05D003708 2.9e-47 192.2 115 84.3
A10p21290 Brassica napus HOM05D003172 ORTHO05D003708 2.9e-47 192.2 115 84.3
C03p10170 Brassica napus HOM05D003172 ORTHO05D003708 2.9e-47 192.2 115 84.3
BolC3t13502H Brassica oleracea HOM05D003172 ORTHO05D003708 2.9e-47 192.2 115 84.3
BolC9t58717H Brassica oleracea HOM05D003172 ORTHO05D003708 2.9e-47 192.2 115 84.3
BraA03t10195Z Brassica rapa HOM05D003172 ORTHO05D003708 2.9e-47 192.2 115 84.3
BraA10t44192Z Brassica rapa HOM05D003172 ORTHO05D003708 2.9e-47 192.2 115 84.3
CARHR194830 Cardamine hirsuta HOM05D003172 ORTHO05D003708 2.9e-47 192.2 115 84.3
CARHR217100 Cardamine hirsuta HOM05D003172 ORTHO05D003708 2.9e-47 192.2 115 83.5
Thhalv10012672m.g Eutrema salsugineum HOM05D003172 ORTHO05D003708 2.9e-47 192.2 115 84.3
Sp6g26090 Schrenkiella parvula HOM05D003172 ORTHO05D003708 2.9e-47 192.2 115 84.3
SGA_v2.0_scaffold94G28397 Striga asiatica HOM05D003172 ORTHO05D003708 3.7e-47 191.8 137 75.2
DCAR_016860 Daucus carota HOM05D003172 ORTHO05D003708 6.4e-47 191.0 120 81.7
BcaB01g05182 Brassica carinata HOM05D003172 ORTHO05D003708 8.3e-47 190.7 115 83.5
Ca_08256_v3 Cicer arietinum L. HOM05D003172 ORTHO05D003708 8.3e-47 190.7 113 84.1
HPP92_013954 Vanilla planifolia HOM05D003172 ORTHO05D003708 8.3e-47 190.7 120 79.2
Carub.0006s1651 Capsella rubella HOM05D003172 ORTHO05D003708 1.1e-46 190.3 115 83.5
PSO339G0422 Papaver somniferum HOM05D003172 ORTHO05D003708 1.1e-46 190.3 120 81.7
PSO384G1776 Papaver somniferum HOM05D003172 ORTHO05D003708 1.1e-46 190.3 120 81.7
THA.LOC104802864 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 1.4e-46 189.9 115 83.5
Aa31LG11G11360 Aethionema arabicum HOM05D003172 ORTHO05D003708 1.9e-46 189.5 115 82.6
BcaC04g18714 Brassica carinata HOM05D003172 ORTHO05D003708 1.9e-46 189.5 114 84.2
C09p58750 Brassica napus HOM05D003172 ORTHO05D003708 1.9e-46 189.5 114 84.2
Lsat_1_v5_gn_2_57861 Lactuca sativa HOM05D003172 ORTHO05D003708 1.9e-46 189.5 120 80.0
Psat3g089480 Pisum sativum HOM05D003172 ORTHO05D003708 2.4e-46 189.1 113 83.2
A03p08740 Brassica napus HOM05D003172 ORTHO05D003708 3.2e-46 188.7 115 82.6
THA.LOC104820736 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 3.2e-46 188.7 115 82.6
Medtr7g085350 Medicago truncatula HOM05D003172 ORTHO05D003708 4.1e-46 188.3 113 83.2
Cc06_g21440 Coffea canephora HOM05D003172 ORTHO05D003708 5.4e-46 188.0 120 80.8
ECA238G3293 Erigeron canadensis HOM05D003172 ORTHO05D003708 9.2e-46 187.2 120 79.2
Lsat_1_v5_gn_6_36740 Lactuca sativa HOM05D003172 ORTHO05D003708 9.2e-46 187.2 120 79.2
HanXRQChr09g0252941 Helianthus annuus HOM05D003172 ORTHO05D003708 1.0e-44 183.7 120 78.3
DCAR_013693 Daucus carota HOM05D003172 ORTHO05D003708 1.3e-44 183.3 110 83.6
HanXRQChr09g0266331 Helianthus annuus HOM05D003172 ORTHO05D003708 1.3e-44 183.3 120 76.7
Os03g0652100 Oryza sativa ssp. japonica HOM05D003172 ORTHO05D003708 1.7e-44 183.0 108 81.5
Sed0012949 Sechium edule HOM05D003172 ORTHO05D003708 2.3e-44 182.6 120 76.7
unitig_26.g9324 Utricularia gibba HOM05D003172 ORTHO05D003708 2.3e-44 182.6 126 73.8
SEGI_39352 Sequoiadendron giganteum HOM05D003172 ORTHO05D003708 3.9e-44 181.8 119 77.3
Zm00001eb052870 Zea mays HOM05D003172 ORTHO05D003708 5.0e-44 181.4 107 82.2
TWI34G0902 Tripterygium wilfordii HOM05D003172 ORTHO05D003708 8.6e-44 180.6 116 80.2
Mapoly0036s0115 Marchantia polymorpha HOM05D003172 ORTHO05D003708 6.8e-41 171.0 121 72.7
TPR.G5918 Trifolium pratense HOM05D003172 ORTHO05D003708 1.5e-40 169.9 111 77.5
Lsat_1_v5_gn_8_47041 Lactuca sativa HOM05D003172 ORTHO05D003708 2.0e-40 169.5 120 73.3
HPP92_012145 Vanilla planifolia HOM05D003172 ORTHO05D003708 3.4e-40 168.7 120 70.8
Mapoly0027s0010 Marchantia polymorpha HOM05D003172 ORTHO05D003708 5.8e-40 167.9 110 74.5
Migut.K00001 Erythranthe guttata HOM05D003172 ORTHO05D003708 2.2e-39 166.0 108 82.4
Pp3c24_19770 Physcomitrium patens HOM05D003172 ORTHO05D003708 8.3e-39 164.1 123 68.3
Lsat_1_v5_gn_8_48920 Lactuca sativa HOM05D003172 ORTHO05D003708 1.2e-37 160.2 120 70.0
AagrBONN_evm.TU.Sc2ySwM_362.2336 Anthoceros agrestis HOM05D003172 ORTHO05D003708 1.6e-37 159.8 123 69.1
Cpa.g.c39665 Carica papaya HOM05D003172 ORTHO05D003708 2.1e-37 159.5 83 96.4
BcaC03g13584 Brassica carinata HOM05D003172 ORTHO05D003708 3.5e-37 158.7 115 73.9
CBR_g17178 Chara braunii HOM05D003172 ORTHO05D003708 3.5e-37 158.7 113 69.0
HanXRQChr14g0438971 Helianthus annuus HOM05D003172 ORTHO05D003708 2.3e-36 156.0 120 69.2
Pp3c8_22460 Physcomitrium patens HOM05D003172 ORTHO05D003708 1.5e-35 153.3 123 64.2
unitig_736.g22311 Utricularia gibba HOM05D003172 ORTHO05D003708 4.1e-30 135.2 85 78.8
SHI23375 Sapria himalayana HOM05D003172 ORTHO05D003708 9.2e-30 134.0 101 68.3
MCO08G071 Micromonas commoda HOM05D003172 ORTHO05D003708 9.0e-25 117.5 129 48.8
Lsat_1_v5_gn_5_95200 Lactuca sativa HOM05D003172 ORTHO05D003708 2.2e-15 86.3 55 76.4
AL6G29450 Arabidopsis lyrata HOM05D003172 ORTHO05D003708 1.1e-11 73.9 45 77.8
Cre04.g227350 Chlamydomonas reinhardtii HOM05D003172 ORTHO05D003708 2.1e-10 69.7 124 32.3
Cfa022625 Carpinus fangiana HOM05D003172 ORTHO05D003708 1.4e-09 67.0 117 36.8
Actinidia22095 Actinidia chinensis HOM05D003172 ORTHO05D003708 9.9e-08 60.8 39 84.6
Lsat_1_v5_gn_4_15900 Lactuca sativa HOM05D003172 ORTHO05D022834 1.7e-07 60.1 42 69.0
BraA02t05438Z Brassica rapa HOM05D003172 ORTHO05D003708 4.9e-07 58.5 35 77.1
Lsat_1_v5_gn_8_20721 Lactuca sativa HOM05D003172 ORTHO05D022834 6.4e-07 58.2 38 71.1
A02p04800 Brassica napus HOM05D003172 ORTHO05D003708 1.9e-06 56.6 37 73.0
CBR_g48493 Chara braunii HOM05D003172 ORTHO05D003708 4.2e-06 55.5 63 46.0


User provided reference genes

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