Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.c33209.1 Carica papaya HOM05D003521 ORTHO05D000476 6.5e-216 753.8 395 100.0
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 2.5e-66 256.9 381 48.6
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 4.3e-66 256.1 407 45.7
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 2.0e-63 247.3 380 47.6
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 1.3e-59 234.6 407 43.0
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 2.8e-57 226.9 379 45.4
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 4.7e-57 226.1 380 45.5
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 8.1e-57 225.3 418 41.4
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 3.1e-56 223.4 387 44.4
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 3.1e-56 223.4 380 45.5
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 2.0e-55 220.7 419 43.4
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 2.9e-54 216.9 398 39.7
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 2.4e-53 213.8 385 44.7
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 2.4e-53 213.8 381 43.6
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 8.7e-51 205.3 377 43.2
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 1.1e-50 204.9 388 40.2
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 1.5e-50 204.5 380 43.2
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 5.6e-50 202.6 377 40.6
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 7.3e-50 202.2 393 41.7
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 1.1e-48 198.4 389 42.2
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 1.4e-48 198.0 387 41.6
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.4e-48 198.0 381 43.0
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 3.1e-48 196.8 415 36.4
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 3.1e-48 196.8 375 40.0
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 2.6e-47 193.7 400 41.0
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 3.4e-47 193.4 380 41.6
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 4.9e-46 189.5 377 41.1
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 6.4e-46 189.1 383 41.8
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 1.1e-45 188.3 379 40.6
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 1.9e-45 187.6 401 39.9
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 1.6e-44 184.5 395 38.0
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 3.5e-44 183.3 399 39.8
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 7.8e-44 182.2 373 40.2
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 3.0e-43 180.3 382 41.1
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 3.0e-43 180.3 384 39.8
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 1.5e-42 177.9 381 38.3
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 2.1e-41 174.1 390 37.9
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 6.2e-41 172.6 403 36.5
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 1.1e-40 171.8 379 37.7
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 1.4e-40 171.4 385 37.4
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 3.1e-40 170.2 377 39.5
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 4.0e-40 169.9 385 37.7
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 5.3e-40 169.5 372 39.0
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 6.9e-40 169.1 380 37.9
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 2.0e-39 167.5 401 38.7
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 2.9e-38 163.7 387 37.0
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 2.4e-37 160.6 429 38.2
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 3.2e-37 160.2 386 36.8
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 3.2e-37 160.2 399 35.8
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 1.6e-36 157.9 422 35.3
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 2.1e-36 157.5 394 38.3
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 2.7e-36 157.1 388 37.9
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 3.5e-36 156.8 399 37.3
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 7.9e-36 155.6 399 36.8
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 1.8e-35 154.5 390 36.7
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 2.3e-35 154.1 457 34.6
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 3.9e-35 153.3 429 36.4
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 5.1e-35 152.9 395 37.2
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 6.7e-35 152.5 402 36.1
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 8.7e-35 152.1 429 36.4
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 8.7e-35 152.1 398 33.4
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 1.1e-34 151.8 389 37.5
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 1.1e-34 151.8 426 33.6
Oeu024072.1 Olea europaea HOM05D003521 ORTHO05D000476 3.3e-34 150.2 383 37.1
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 4.3e-34 149.8 398 35.2
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 9.6e-34 148.7 428 35.5
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 1.6e-33 147.9 393 33.8
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 1.6e-33 147.9 408 36.3
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 2.1e-33 147.5 413 35.1
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 2.1e-33 147.5 418 34.2
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 3.7e-33 146.7 399 34.6
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 3.7e-33 146.7 426 35.9
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 8.1e-33 145.6 380 36.6
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 1.8e-32 144.4 379 35.1
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 2.4e-32 144.1 383 35.5
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 2.4e-32 144.1 417 33.6
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 3.1e-32 143.7 437 34.1
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 3.1e-32 143.7 428 36.9
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 2.6e-31 140.6 462 32.5
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 5.8e-31 139.4 389 35.7
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 5.8e-31 139.4 450 32.9
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 7.6e-31 139.0 385 34.8
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 1.1e-29 135.2 374 33.4
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 1.4e-29 134.8 397 33.8
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 1.4e-29 134.8 419 33.4
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 2.5e-29 134.0 462 32.3
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 3.2e-29 133.7 428 32.7
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 7.1e-29 132.5 400 35.8
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 7.1e-29 132.5 401 34.9
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 1.2e-28 131.7 462 31.4
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 2.7e-28 130.6 417 31.7
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 4.6e-28 129.8 414 33.1
Dinv38016 Davidia involucrata HOM05D003521 ORTHO05D000476 1.0e-27 128.6 103 68.9
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 1.8e-27 127.9 380 32.6
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 2.3e-27 127.5 397 31.5
Oeu024073.1 Olea europaea HOM05D003521 ORTHO05D000476 2.3e-27 127.5 401 33.9
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 6.7e-27 125.9 397 33.0
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 8.7e-27 125.6 378 33.3
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.1e-26 125.2 394 33.5
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 1.5e-26 124.8 405 32.6
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 3.3e-26 123.6 400 34.5
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 3.3e-26 123.6 421 32.8
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 1.3e-25 121.7 389 34.4
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 2.8e-25 120.6 396 32.6
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 2.8e-25 120.6 395 33.7
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 6.2e-25 119.4 433 34.2
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 1.8e-24 117.9 413 31.2
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 1.7e-22 111.3 398 34.4
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 7.1e-21 105.9 434 31.6
Zm00001eb343530 Zea mays HOM05D003521 ORTHO05D000476 1.6e-20 104.8 449 27.2
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 7.9e-20 102.4 547 26.9
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 1.0e-19 102.1 389 32.1
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 1.0e-19 102.1 375 29.3
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 3.9e-19 100.1 367 31.1
SEGI_27505 Sequoiadendron giganteum HOM05D003521 ORTHO05D000476 3.9e-19 100.1 397 28.7
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 4.3e-18 96.7 409 29.3
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 2.0e-15 87.8 402 29.9
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 5.9e-15 86.3 564 26.4
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 7.7e-15 85.9 451 26.4
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 1.1e-13 82.0 457 26.0
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 4.2e-13 80.1 385 27.0
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 4.6e-12 76.6 388 27.1
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 8.8e-11 72.4 135 46.7
Prupe.5G245900 Prunus persica HOM05D003521 ORTHO05D000476 2.2e-09 67.8 239 31.0
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 3.7e-09 67.0 387 28.9
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 6.3e-09 66.2 371 28.0
Prupe.4G118900 Prunus persica HOM05D003521 ORTHO05D000476 6.3e-09 66.2 185 31.4
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 1.5e-07 61.6 366 27.3
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 2.6e-07 60.8 377 27.1
Medtr2g043010 Medicago truncatula HOM05D003521 ORTHO05D000476 4.5e-07 60.1 43 69.8
CARHR143550 Cardamine hirsuta HOM05D003521 ORTHO05D000476 1.3e-06 58.5 194 32.5
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 6.5e-06 56.2 371 25.1


User provided reference genes

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