Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG11G013640 Citrullus lanatus HOM05D006443 ORTHO05D007797 1.7e-51 205.7 100 100.0
MELO3C011863.2 Cucumis melo HOM05D006443 ORTHO05D007797 1.1e-50 203.0 100 98.0
CsaV3_5G030250 Cucumis sativus L. HOM05D006443 ORTHO05D007797 1.0e-48 196.4 100 95.0
ClCG11G013630 Citrullus lanatus HOM05D006443 ORTHO05D007797 1.5e-44 182.6 96 92.7
Actinidia08069 Actinidia chinensis HOM05D006443 ORTHO05D007797 3.2e-42 174.9 100 86.0
CSS0008831 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 3.2e-42 174.9 100 85.0
CSS0026603 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 3.2e-42 174.9 100 85.0
Actinidia30647 Actinidia chinensis HOM05D006443 ORTHO05D007797 4.1e-42 174.5 100 85.0
Eucgr.H04637 Eucalyptus grandis HOM05D006443 ORTHO05D007797 4.1e-42 174.5 100 84.0
Peaxi162Scf00359g00713 Petunia axillaris HOM05D006443 ORTHO05D007797 5.4e-42 174.1 100 82.0
QL03p052624 Quercus lobata HOM05D006443 ORTHO05D007797 5.4e-42 174.1 99 84.8
CiPaw.05G109500 Carya illinoinensis HOM05D006443 ORTHO05D007797 7.1e-42 173.7 100 84.0
Cfa009372 Carpinus fangiana HOM05D006443 ORTHO05D007797 9.2e-42 173.3 100 84.0
Gohir.A04G139700 Gossypium hirsutum HOM05D006443 ORTHO05D007797 1.2e-41 172.9 100 85.0
Gorai.012G175900 Gossypium raimondii HOM05D006443 ORTHO05D007797 1.2e-41 172.9 100 85.0
Prupe.1G225500 Prunus persica HOM05D006443 ORTHO05D007797 1.2e-41 172.9 100 83.0
TPR.G17786 Trifolium pratense HOM05D006443 ORTHO05D007797 1.6e-41 172.6 100 82.0
Haze_12422 Corylus avellana HOM05D006443 ORTHO05D007797 2.1e-41 172.2 100 83.0
Lalb_Chr11g0075761 Lupinus albus HOM05D006443 ORTHO05D007797 2.1e-41 172.2 100 82.0
RcHm_v2.0_Chr4g0430211 Rosa chinensis HOM05D006443 ORTHO05D007797 2.1e-41 172.2 100 84.0
GSVIVG01010487001 Vitis vinifera HOM05D006443 ORTHO05D007797 2.1e-41 172.2 100 83.0
Potri.003G171900 Populus trichocarpa HOM05D006443 ORTHO05D007797 2.7e-41 171.8 100 84.0
TAR629G0791 Trochodendron aralioides HOM05D006443 ORTHO05D007797 2.7e-41 171.8 100 82.0
Nn4g22309 Nelumbo nucifera HOM05D006443 ORTHO05D007797 3.5e-41 171.4 100 82.0
SGA_v2.0_scaffold9G04677 Striga asiatica HOM05D006443 ORTHO05D007797 3.5e-41 171.4 100 83.0
Atru.chr11.2327 Acer truncatum HOM05D006443 ORTHO05D007797 4.6e-41 171.0 100 84.0
Hma1.2p1_0065F.1_g035440 Hydrangea macrophylla HOM05D006443 ORTHO05D007797 4.6e-41 171.0 100 83.0
Hma1.2p1_0065F.1_g035450 Hydrangea macrophylla HOM05D006443 ORTHO05D007797 4.6e-41 171.0 100 83.0
arahy.Tifrunner.gnm1.ann1.DXN1WG Arachis hypogaea HOM05D006443 ORTHO05D007797 6.0e-41 170.6 100 81.0
arahy.Tifrunner.gnm1.ann1.P16M7J Arachis hypogaea HOM05D006443 ORTHO05D007797 6.0e-41 170.6 100 81.0
Ca_16457_v3 Cicer arietinum L. HOM05D006443 ORTHO05D007797 6.0e-41 170.6 100 81.0
Ciclev10031911m.g Citrus clementina HOM05D006443 ORTHO05D007797 6.0e-41 170.6 100 82.0
Gohir.D04G182900 Gossypium hirsutum HOM05D006443 ORTHO05D007797 6.0e-41 170.6 100 84.0
COL.COLO4_20406 Corchorus olitorius HOM05D006443 ORTHO05D007797 7.8e-41 170.2 100 84.0
FAN07G1264 Fragaria x ananassa HOM05D006443 ORTHO05D007797 1.0e-40 169.9 100 83.0
PSO017G6191 Papaver somniferum HOM05D006443 ORTHO05D007797 1.3e-40 169.5 100 83.0
PGR119G0512 Punica granatum HOM05D006443 ORTHO05D007797 1.3e-40 169.5 100 83.0
Sabra03G0125800 Salix brachista HOM05D006443 ORTHO05D007797 1.3e-40 169.5 100 82.0
Thecc.02G208000 Theobroma cacao HOM05D006443 ORTHO05D007797 1.3e-40 169.5 100 83.0
Phvul.001G262100 Phaseolus vulgaris HOM05D006443 ORTHO05D007797 1.7e-40 169.1 100 80.0
FAN17G1989 Fragaria x ananassa HOM05D006443 ORTHO05D007797 2.3e-40 168.7 100 82.0
Lj6C827T5 Lonicera japonica HOM05D006443 ORTHO05D007797 2.3e-40 168.7 100 82.0
CANSAT01G1158 Cannabis sativa HOM05D006443 ORTHO05D007797 3.0e-40 168.3 100 82.0
Cc11_g16930 Coffea canephora HOM05D006443 ORTHO05D007797 3.9e-40 167.9 100 81.0
Medtr3g085290 Medicago truncatula HOM05D006443 ORTHO05D007797 3.9e-40 167.9 100 80.0
Psat5g096400 Pisum sativum HOM05D006443 ORTHO05D007797 3.9e-40 167.9 100 81.0
FAN22G2300 Fragaria x ananassa HOM05D006443 ORTHO05D007797 5.1e-40 167.5 100 82.0
Lsat_1_v5_gn_4_56020 Lactuca sativa HOM05D006443 ORTHO05D007797 5.1e-40 167.5 100 80.0
Aqoxy5G03367 Aquilegia oxysepala HOM05D006443 ORTHO05D007797 6.6e-40 167.2 100 81.0
Duzib248G1079 Durio zibethinus HOM05D006443 ORTHO05D007797 6.6e-40 167.2 100 82.0
MD13G1119500 Malus domestica HOM05D006443 ORTHO05D007797 6.6e-40 167.2 100 80.0
MSTRG.502 Avicennia marina HOM05D006443 ORTHO05D007797 8.6e-40 166.8 100 77.0
Cpa.g.sc43.60 Carica papaya HOM05D006443 ORTHO05D007797 8.6e-40 166.8 100 78.0
FvH4_4g23730 Fragaria vesca HOM05D006443 ORTHO05D007797 1.1e-39 166.4 100 82.0
PSO478G2155 Papaver somniferum HOM05D006443 ORTHO05D007797 1.1e-39 166.4 100 82.0
Glyma.18G006200 Glycine max HOM05D006443 ORTHO05D007797 1.5e-39 166.0 100 79.0
Sc14g0009070 Simmondsia chinensis HOM05D006443 ORTHO05D007797 1.5e-39 166.0 100 82.0
BraA09t41778Z Brassica rapa HOM05D006443 ORTHO05D007797 2.5e-39 165.2 100 80.0
Glyma.11G250800 Glycine max HOM05D006443 ORTHO05D007797 2.5e-39 165.2 100 78.0
MBI11_g05329_MAGBIO Magnolia biondii HOM05D006443 ORTHO05D007797 2.5e-39 165.2 97 79.4
THA.LOC104807130 Tarenaya hassleriana HOM05D006443 ORTHO05D007797 2.5e-39 165.2 100 81.0
A09p64340 Brassica napus HOM05D004937 ORTHO05D007797 3.3e-39 164.9 100 80.0
HanXRQChr08g0207841 Helianthus annuus HOM05D006443 ORTHO05D007797 3.3e-39 164.9 100 80.0
Nitab4.5_0008905g0010 Nicotiana tabacum HOM05D006443 ORTHO05D007797 3.3e-39 164.9 99 78.8
Lj6g0022486 Lotus japonicus HOM05D006443 ORTHO05D007797 4.3e-39 164.5 100 80.0
TWI36G0197 Tripterygium wilfordii HOM05D006443 ORTHO05D007797 4.3e-39 164.5 100 79.0
VMungo1383G0397 Vigna mungo HOM05D006443 ORTHO05D007797 5.6e-39 164.1 100 79.0
C08p47970 Brassica napus HOM05D006443 ORTHO05D007797 1.2e-38 162.9 100 79.0
BolC8t52335H Brassica oleracea HOM05D006443 ORTHO05D007797 1.2e-38 162.9 100 79.0
BcaB08g37422 Brassica carinata HOM05D006443 ORTHO05D007797 1.6e-38 162.5 100 79.0
Migut.K00736 Erythranthe guttata HOM05D006443 ORTHO05D007797 1.6e-38 162.5 100 79.0
AL1G22970 Arabidopsis lyrata HOM05D006443 ORTHO05D007797 2.1e-38 162.2 100 79.0
Carub.0001s1145 Capsella rubella HOM05D006443 ORTHO05D007797 2.1e-38 162.2 100 78.0
Thhalv10008060m.g Eutrema salsugineum HOM05D006443 ORTHO05D007797 2.8e-38 161.8 100 77.0
Solyc04g045590.3 Solanum lycopersicum HOM05D006443 ORTHO05D007797 2.8e-38 161.8 100 77.0
Sopen04g017520 Solanum pennellii HOM05D006443 ORTHO05D007797 2.8e-38 161.8 100 77.0
Oeu058924.1 Olea europaea HOM05D006443 ORTHO05D007797 3.6e-38 161.4 100 78.0
BcaC07g41759 Brassica carinata HOM05D006443 ORTHO05D007797 6.2e-38 160.6 100 78.0
Sp1g10410 Schrenkiella parvula HOM05D006443 ORTHO05D007797 6.2e-38 160.6 100 78.0
CAN.G237.4 Capsicum annuum HOM05D006443 ORTHO05D007797 1.1e-37 159.8 100 76.0
ATR0561G191 Amborella trichopoda HOM05D006443 ORTHO05D007797 1.4e-37 159.5 98 75.5
AT1G11780 Arabidopsis thaliana HOM05D006443 ORTHO05D007797 1.4e-37 159.5 100 77.0
CARHR012120 Cardamine hirsuta HOM05D006443 ORTHO05D007797 1.8e-37 159.1 100 78.0
AUR62005622 Chenopodium quinoa HOM05D006443 ORTHO05D007797 2.4e-37 158.7 100 77.0
CDE05G3615 Ceratophyllum demersum HOM05D006443 ORTHO05D007797 5.2e-37 157.5 98 76.5
Aa31LG1G3790 Aethionema arabicum HOM05D006443 ORTHO05D007797 8.9e-37 156.8 101 75.2
Hund06091 Selenicereus undatus HOM05D006443 ORTHO05D007797 4.4e-36 154.5 101 76.2
Rhsim12G0099900 Rhododendron simsii HOM05D006443 ORTHO05D007797 4.2e-34 147.9 87 81.6
SEGI_28427 Sequoiadendron giganteum HOM05D006443 ORTHO05D007797 7.1e-34 147.1 100 71.0
Zm00001eb169540 Zea mays HOM05D006443 ORTHO05D007797 1.6e-33 146.0 100 70.0
Nitab4.5_0001356g0010 Nicotiana tabacum HOM05D006443 ORTHO05D007797 2.5e-31 138.7 87 74.7
SMO196G0120 Selaginella moellendorffii HOM05D006443 ORTHO05D007797 8.1e-30 133.7 102 67.6
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 4.0e-29 131.3 79 77.2
unitig_747.g21126 Utricularia gibba HOM05D006443 ORTHO05D007797 1.5e-28 129.4 74 82.4
Mapoly0036s0054 Marchantia polymorpha HOM05D006443 ORTHO05D007797 2.6e-28 128.6 101 66.3
Pp3c15_20640 Physcomitrium patens HOM05D006443 ORTHO05D007797 4.9e-27 124.4 104 59.6
CBR_g32330 Chara braunii HOM05D006443 ORTHO05D007797 1.9e-26 122.5 100 61.0
AagrBONN_evm.TU.Sc2ySwM_228.5822 Anthoceros agrestis HOM05D006443 ORTHO05D007797 1.3e-24 116.3 100 59.0
Manes.13G011800 Manihot esculenta HOM05D006443 ORTHO05D007797 5.1e-24 114.4 54 96.3
DCAR_031204 Daucus carota HOM05D006443 ORTHO05D007797 8.7e-24 113.6 59 84.7
Sed0000233 Sechium edule HOM05D006443 ORTHO05D007797 8.7e-24 113.6 54 98.1
vmacro19384 Vaccinium macrocarpon HOM05D006443 ORTHO05D007797 3.3e-23 111.7 100 62.0
EL10Ac6g13506 Beta vulgaris HOM05D006443 ORTHO05D007797 8.1e-22 107.1 54 88.9
AUR62028926 Chenopodium quinoa HOM05D006443 ORTHO05D007797 2.4e-21 105.5 53 90.6
Os11g0488500 Oryza sativa ssp. japonica HOM05D006443 ORTHO05D007797 5.3e-21 104.4 54 85.2
CSS0017614 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 3.9e-16 88.2 45 86.7
MCO14G547 Micromonas commoda HOM05D006443 ORTHO05D007797 6.7e-16 87.4 106 40.6
CSS0019305 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 1.1e-15 86.7 45 84.4
Cre06.g278198 Chlamydomonas reinhardtii HOM05D006443 ORTHO05D007797 3.3e-15 85.1 108 41.7
CSS0022605 Camellia sinensis var. sinensis HOM05D006443 ORTHO05D007797 7.4e-15 84.0 44 86.4
PRCOL_00005324 Prasinoderma coloniale HOM05D006443 ORTHO05D007797 1.0e-11 73.6 65 50.8
VMungo0331G2034 Vigna mungo HOM05D003341 ORTHO05D003603 1.3e-06 56.6 60 41.7
VMungo0331G1094 Vigna mungo HOM05D003341 ORTHO05D003603 1.6e-06 56.2 60 41.7
Gorai.011G130100 Gossypium raimondii HOM05D003341 ORTHO05D003603 2.1e-06 55.8 89 38.2
BcaC07g41777 Brassica carinata HOM05D006443 ORTHO05D007797 4.8e-06 54.7 43 55.8
Gohir.A10G148300 Gossypium hirsutum HOM05D003341 ORTHO05D003603 6.2e-06 54.3 89 37.1
Phvul.001G131400 Phaseolus vulgaris HOM05D003341 ORTHO05D003603 6.2e-06 54.3 51 45.1
Migut.J00784 Erythranthe guttata HOM05D003341 ORTHO05D003603 8.2e-06 53.9 49 49.0


User provided reference genes

Program Settings