Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 0.0e+00 2610.9 1318 100.0
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 0.0e+00 2413.6 1316 92.1
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 0.0e+00 2033.5 1107 92.5
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 0.0e+00 1891.3 1092 87.7
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 0.0e+00 1801.6 1326 68.2
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 0.0e+00 1792.7 1321 68.7
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 0.0e+00 1790.4 1326 67.8
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1763.8 1326 66.9
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 0.0e+00 1748.0 1317 67.8
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 0.0e+00 1744.9 1321 66.5
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1741.5 1326 67.6
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 0.0e+00 1741.1 1323 65.6
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1739.5 1322 66.9
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 0.0e+00 1738.0 1326 67.2
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1736.1 1322 66.8
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 0.0e+00 1733.4 1320 66.1
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 0.0e+00 1733.0 1326 67.3
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 0.0e+00 1731.5 1322 66.6
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1726.1 1322 65.8
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1723.8 1322 66.2
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 0.0e+00 1723.8 1326 66.9
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 0.0e+00 1723.4 1322 66.3
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1717.2 1324 66.5
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1716.8 1320 66.4
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 0.0e+00 1716.0 1326 65.2
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1715.3 1322 65.9
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 0.0e+00 1701.8 1324 65.0
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 0.0e+00 1699.9 1319 64.9
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1693.3 1322 65.8
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1692.9 1243 69.4
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1688.7 1329 64.2
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 0.0e+00 1667.9 1329 63.4
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 0.0e+00 1663.3 1322 63.4
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 0.0e+00 1662.5 1327 64.1
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 0.0e+00 1660.2 1323 63.6
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 0.0e+00 1658.7 1323 64.2
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 0.0e+00 1652.9 1329 63.2
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1651.7 1240 67.1
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 0.0e+00 1651.3 1323 63.6
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1647.1 1242 68.1
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1630.5 1323 63.0
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 0.0e+00 1630.5 1320 63.0
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 0.0e+00 1628.6 1321 62.9
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1625.1 1348 61.6
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 0.0e+00 1624.8 1321 62.3
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 0.0e+00 1624.4 1326 63.6
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 0.0e+00 1619.4 1321 62.4
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1614.0 1325 62.1
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1612.4 1332 61.8
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 0.0e+00 1609.3 1321 62.0
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1605.5 1319 62.3
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 0.0e+00 1603.6 1333 61.7
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 0.0e+00 1603.2 1259 64.9
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 0.0e+00 1593.9 1321 61.6
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 0.0e+00 1586.2 1326 60.8
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 0.0e+00 1584.7 1269 63.0
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 0.0e+00 1583.9 1323 61.5
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 0.0e+00 1583.2 1323 60.4
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 0.0e+00 1580.5 1316 61.3
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1577.0 1327 60.4
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 0.0e+00 1571.6 1337 61.0
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 0.0e+00 1564.7 1325 62.0
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 0.0e+00 1563.1 1271 62.2
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 0.0e+00 1558.5 1324 60.1
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 0.0e+00 1557.0 1240 63.8
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 0.0e+00 1549.6 1343 60.1
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 0.0e+00 1542.7 1328 59.6
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 0.0e+00 1540.8 1324 59.8
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 0.0e+00 1539.2 1324 59.4
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1538.9 1327 59.5
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 0.0e+00 1532.7 1327 59.3
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1531.5 1328 59.0
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 0.0e+00 1531.2 1324 59.4
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 0.0e+00 1521.5 1327 59.0
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 0.0e+00 1515.7 1096 70.1
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 0.0e+00 1510.7 1324 58.8
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1507.7 1337 57.7
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 0.0e+00 1505.3 1324 58.7
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 0.0e+00 1501.1 1354 57.1
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1498.0 1190 63.6
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 0.0e+00 1492.2 1102 67.9
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 0.0e+00 1481.1 1328 57.8
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 0.0e+00 1461.0 1325 57.4
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 0.0e+00 1453.0 1320 57.1
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 0.0e+00 1447.6 1281 59.9
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 0.0e+00 1442.2 1320 58.0
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1434.1 1133 63.8
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 0.0e+00 1426.0 1320 56.2
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 0.0e+00 1360.5 1333 52.2
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 0.0e+00 1359.0 1147 60.4
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 0.0e+00 1343.9 1320 55.8
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 0.0e+00 1322.4 1558 47.9
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 0.0e+00 1312.7 1323 50.9
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 0.0e+00 1287.7 1345 50.9
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 0.0e+00 1279.6 1328 51.7
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 0.0e+00 1225.3 945 65.3
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 0.0e+00 1167.1 901 64.8
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 0.0e+00 1113.6 1330 48.4
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 0.0e+00 1105.5 1253 47.2
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 0.0e+00 1084.7 863 65.0
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 3.3e-296 1022.3 755 69.4
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 4.6e-250 869.0 1367 38.7
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 1.6e-234 817.4 1317 37.7
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 2.1e-226 790.4 1189 39.5
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 6.8e-225 785.4 1150 40.7
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 3.8e-220 769.6 852 47.7
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 3.5e-205 719.9 801 49.1
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 1.4e-153 548.5 1501 30.0
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 3.7e-138 497.3 357 72.0
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 2.1e-133 481.5 460 56.3
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 3.9e-132 477.2 376 62.2
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 2.0e-91 342.0 1366 26.9
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 9.5e-86 323.2 313 56.5
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 4.6e-80 304.3 253 58.9
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 3.3e-78 298.1 1544 24.9
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 9.2e-73 280.0 305 48.5
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 7.6e-67 260.4 196 69.9
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 1.3e-55 223.0 1276 23.8
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 1.3e-50 206.5 167 65.9
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 1.7e-50 206.1 202 52.5
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 8.4e-50 203.8 1346 25.0
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 4.6e-48 198.0 224 47.8
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 1.1e-41 176.8 132 68.9
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 1.5e-38 166.4 123 68.3
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 1.0e-34 153.7 283 41.3
AUR62038375 Chenopodium quinoa HOM05D006356 ORTHO05D007903 3.4e-27 128.6 136 51.5


User provided reference genes

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