Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 0.0e+00 1330.9 659 100.0
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 0.0e+00 1231.5 677 91.0
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 0.0e+00 1141.7 681 85.5
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 0.0e+00 1116.7 799 73.3
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 3.7e-296 1021.1 689 75.2
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 1.2e-291 1006.1 686 76.2
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 2.1e-291 1005.4 682 74.3
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 6.0e-291 1003.8 686 75.5
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 2.5e-289 998.4 686 74.6
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 3.3e-289 998.0 679 73.6
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 6.3e-288 993.8 685 74.2
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 8.2e-288 993.4 684 72.8
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 1.4e-287 992.6 688 73.8
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 9.0e-287 989.9 682 75.2
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 1.0e-285 986.5 689 73.0
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 2.9e-285 984.9 689 73.9
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 5.0e-285 984.2 681 73.4
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 4.2e-284 981.1 647 75.6
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 2.5e-281 971.8 690 72.5
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 5.7e-281 970.7 683 72.8
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 1.1e-279 966.5 683 72.0
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 1.8e-279 965.7 687 73.4
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 2.6e-278 961.8 689 71.7
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 5.9e-278 960.7 683 71.7
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 3.8e-277 958.0 693 72.0
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 8.5e-277 956.8 692 71.2
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.9e-276 955.7 684 72.5
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 3.2e-276 954.9 692 71.5
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 4.2e-276 954.5 679 71.7
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 5.5e-276 954.1 681 72.0
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 7.2e-276 953.7 685 72.6
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 6.1e-275 950.7 677 72.7
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 7.9e-275 950.3 619 74.0
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 1.4e-274 949.5 683 71.7
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 3.0e-274 948.3 683 71.3
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 6.7e-274 947.2 673 71.5
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 4.4e-273 944.5 684 71.5
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 5.7e-273 944.1 684 70.5
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 1.7e-272 942.6 682 71.6
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 8.2e-272 940.3 688 71.4
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 1.2e-270 936.4 678 71.1
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 2.6e-270 935.3 680 70.6
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 1.3e-269 932.9 678 70.1
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 2.9e-269 931.8 676 69.4
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 8.5e-269 930.2 684 70.3
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 1.6e-267 926.0 689 69.5
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 3.6e-267 924.9 684 70.5
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 3.6e-267 924.9 681 70.8
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 3.6e-267 924.9 678 70.8
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 1.8e-266 922.5 629 70.9
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 3.0e-266 921.8 679 68.9
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 2.6e-265 918.7 692 69.1
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 1.3e-264 916.4 692 69.1
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 3.1e-263 911.8 676 68.8
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 7.0e-263 910.6 691 68.7
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 5.9e-262 907.5 643 70.5
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 7.7e-262 907.1 699 67.5
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 1.0e-261 906.7 692 68.1
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 1.1e-260 903.3 689 69.2
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 1.9e-260 902.5 675 68.3
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 2.5e-260 902.1 683 70.0
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 3.2e-260 901.7 711 67.1
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 2.1e-259 899.0 694 66.4
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 3.0e-258 895.2 693 66.7
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 1.2e-257 893.3 632 69.6
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 9.7e-257 890.2 680 67.9
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 8.2e-256 887.1 668 69.0
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 2.4e-255 885.6 669 68.6
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 3.1e-255 885.2 610 71.0
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 4.1e-255 884.8 665 67.8
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 1.3e-253 879.8 632 71.4
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 1.2e-251 873.2 667 67.2
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 1.2e-251 873.2 669 67.0
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 2.1e-251 872.5 622 69.5
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 2.7e-251 872.1 669 66.8
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 8.0e-251 870.5 669 66.7
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 1.0e-250 870.2 668 66.6
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 3.0e-250 868.6 650 68.3
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 5.2e-250 867.8 668 66.5
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 2.0e-249 865.9 610 70.0
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 1.3e-248 863.2 673 64.9
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 2.2e-248 862.4 671 65.0
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 8.9e-242 840.5 674 65.7
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 1.2e-241 840.1 557 77.2
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 1.1e-236 823.5 613 66.7
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 5.2e-234 814.7 562 73.8
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 2.4e-231 805.8 688 61.5
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 2.7e-230 802.4 557 74.1
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 5.6e-228 794.7 801 55.2
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 1.8e-226 789.6 554 70.6
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 8.3e-224 780.8 596 64.4
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 1.2e-219 766.9 663 62.3
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 2.7e-214 749.2 572 68.0
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 1.2e-198 697.2 473 75.7
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 4.9e-192 675.2 583 58.7
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 1.5e-188 663.7 791 49.4
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 1.0e-152 544.7 441 63.3
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 1.7e-152 543.9 380 71.6
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 1.3e-131 474.6 457 54.9
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 7.3e-119 432.2 349 63.6
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 8.0e-118 428.7 568 45.2
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 1.1e-111 408.3 274 73.0
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 1.2e-108 398.3 557 43.6
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.8e-101 374.4 325 62.5
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.8e-101 374.4 325 62.5
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 2.5e-87 327.4 223 69.5
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 3.6e-86 323.6 228 68.9
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 1.6e-81 308.1 554 37.4
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 4.6e-73 280.0 219 65.8
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 3.0e-56 224.2 215 54.9
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 1.0e-51 209.1 565 28.8
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 6.7e-48 196.4 248 44.0
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 7.7e-44 183.0 145 67.6
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 2.2e-35 154.8 123 62.6
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 6.7e-32 143.3 142 54.9
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 4.4e-31 140.6 125 58.4
RcHm_v2.0_Chr1g0380361 Rosa chinensis HOM05D006589 ORTHO05D008350 2.9e-06 58.2 77 61.0


User provided reference genes

Program Settings