Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG05G003160 Citrullus lanatus HOM05D005307 ORTHO05D006695 0.0e+00 1732.6 1142 100.0
CsaV3_3G010790 Cucumis sativus L. HOM05D005307 ORTHO05D006695 0.0e+00 1117.1 953 79.7
MELO3C006297.2 Cucumis melo HOM05D005307 ORTHO05D006695 0.0e+00 1095.5 951 78.9
Sed0024269 Sechium edule HOM05D005307 ORTHO05D006695 3.1e-250 869.4 1187 57.8
Sed0018547 Sechium edule HOM05D005307 ORTHO05D006695 6.4e-248 861.7 1127 65.7
Cfa014955 Carpinus fangiana HOM05D005307 ORTHO05D006695 1.5e-204 717.6 563 77.6
Haze_11645 Corylus avellana HOM05D005307 ORTHO05D006695 5.7e-204 715.7 563 76.2
Prupe.1G163200 Prunus persica HOM05D005307 ORTHO05D006695 3.1e-202 709.9 724 64.5
MD04G1016500 Malus domestica HOM05D005307 ORTHO05D006695 2.0e-201 707.2 717 66.2
QL06p026221 Quercus lobata HOM05D005307 ORTHO05D006695 1.7e-200 704.1 570 76.3
Eucgr.H02691 Eucalyptus grandis HOM05D005307 ORTHO05D006695 4.7e-198 696.0 713 66.8
Ca_17978_v3 Cicer arietinum L. HOM05D005307 ORTHO05D006695 2.0e-196 690.6 545 78.9
arahy.Tifrunner.gnm1.ann1.C718TQ Arachis hypogaea HOM05D005307 ORTHO05D006695 1.7e-195 687.6 501 79.2
arahy.Tifrunner.gnm1.ann1.GBN5SF Arachis hypogaea HOM05D005307 ORTHO05D006695 4.8e-195 686.0 501 79.4
Thecc.04G196200 Theobroma cacao HOM05D005307 ORTHO05D006695 2.4e-194 683.7 503 80.9
Actinidia35846 Actinidia chinensis HOM05D005307 ORTHO05D006695 5.9e-193 679.1 692 64.7
Dinv38181 Davidia involucrata HOM05D005307 ORTHO05D006695 6.5e-192 675.6 706 63.0
TPR.G11920 Trifolium pratense HOM05D005307 ORTHO05D006695 1.5e-191 674.5 532 76.9
Medtr8g081640 Medicago truncatula HOM05D005307 ORTHO05D006695 4.2e-191 672.9 501 75.2
COL.COLO4_20217 Corchorus olitorius HOM05D005307 ORTHO05D006695 2.1e-190 670.6 503 74.8
Gorai.011G153100 Gossypium raimondii HOM05D005307 ORTHO05D006695 2.1e-190 670.6 503 75.1
Ciclev10004448m.g Citrus clementina HOM05D005307 ORTHO05D006695 2.3e-189 667.2 587 72.1
Gohir.D10G137900 Gossypium hirsutum HOM05D005307 ORTHO05D006695 5.2e-189 666.0 503 75.0
VMungo0251G3181 Vigna mungo HOM05D005307 ORTHO05D006695 8.8e-189 665.2 503 78.9
Eucgr.L00037 Eucalyptus grandis HOM05D005307 ORTHO05D006695 1.5e-188 664.5 731 64.3
Gorai.005G028400 Gossypium raimondii HOM05D005307 ORTHO05D006695 2.6e-188 663.7 503 81.3
Lsat_1_v5_gn_1_73301 Lactuca sativa HOM05D005307 ORTHO05D006695 2.6e-188 663.7 562 71.7
TAR636G0868 Trochodendron aralioides HOM05D005307 ORTHO05D006695 7.5e-188 662.1 553 72.5
Atru.chr3.1814 Acer truncatum HOM05D005307 ORTHO05D006695 4.8e-187 659.4 744 62.8
Gohir.D02G023000 Gossypium hirsutum HOM05D005307 ORTHO05D006695 5.4e-186 656.0 503 80.5
Potri.017G058300 Populus trichocarpa HOM05D005307 ORTHO05D006695 5.4e-186 656.0 718 62.3
CSS0004168 Camellia sinensis var. sinensis HOM05D005307 ORTHO05D006695 9.1e-186 655.2 568 71.7
ECA248G0158 Erigeron canadensis HOM05D005307 ORTHO05D006695 2.7e-185 653.7 565 71.2
Sabra16G0201900 Salix brachista HOM05D005307 ORTHO05D006695 2.7e-185 653.7 710 62.4
Lalb_Chr12g0205581 Lupinus albus HOM05D005307 ORTHO05D006695 5.9e-185 652.5 689 65.6
Gohir.A02G019700 Gossypium hirsutum HOM05D005307 ORTHO05D006695 7.7e-185 652.1 503 78.1
TAR365G0199 Trochodendron aralioides HOM05D005307 ORTHO05D006695 3.8e-184 649.8 545 70.3
FAN17G0194 Fragaria x ananassa HOM05D005307 ORTHO05D006695 8.6e-184 648.7 730 61.8
FAN07G1190 Fragaria x ananassa HOM05D005307 ORTHO05D006695 3.3e-183 646.7 730 61.5
Thhalv10002398m.g Eutrema salsugineum HOM05D005307 ORTHO05D006695 5.5e-183 646.0 569 67.0
RcHm_v2.0_Chr4g0413751 Rosa chinensis HOM05D005307 ORTHO05D006695 7.2e-183 645.6 717 62.3
Gohir.A10G128100 Gossypium hirsutum HOM05D005307 ORTHO05D006695 9.5e-183 645.2 490 74.7
FAN22G0006 Fragaria x ananassa HOM05D005307 ORTHO05D006695 1.6e-182 644.4 540 77.0
Glyma.08G109600 Glycine max HOM05D005307 ORTHO05D006695 1.6e-182 644.4 750 59.2
DCAR_005485 Daucus carota HOM05D005307 ORTHO05D006695 2.8e-182 643.7 691 62.8
FAN12G2903 Fragaria x ananassa HOM05D005307 ORTHO05D006695 2.8e-182 643.7 730 61.4
FvH4_4g13380 Fragaria vesca HOM05D005307 ORTHO05D006695 1.0e-181 641.7 780 59.0
THA.LOC104808701 Tarenaya hassleriana HOM05D005307 ORTHO05D006695 3.0e-181 640.2 562 73.0
GSVIVG01001478001 Vitis vinifera HOM05D005307 ORTHO05D006695 1.2e-180 638.3 562 75.1
Glyma.05G152900 Glycine max HOM05D005307 ORTHO05D006695 2.6e-180 637.1 723 61.1
Lj4g0027601 Lotus japonicus HOM05D005307 ORTHO05D006695 1.8e-178 630.9 505 74.3
Psat7g074720 Pisum sativum HOM05D005307 ORTHO05D006695 3.1e-178 630.2 691 63.5
Manes.03G144900 Manihot esculenta HOM05D005307 ORTHO05D006695 7.0e-178 629.0 748 60.7
Nn1g08214 Nelumbo nucifera HOM05D005307 ORTHO05D006695 7.0e-178 629.0 501 71.7
Sp3g21580 Schrenkiella parvula HOM05D005307 ORTHO05D006695 9.2e-178 628.6 567 68.4
Sabra17G0051900 Salix brachista HOM05D005307 ORTHO05D006695 3.5e-177 626.7 731 60.1
HanXRQChr01g0022201 Helianthus annuus HOM05D005307 ORTHO05D006695 7.8e-177 625.5 701 59.9
EL10Ac3g07462 Beta vulgaris HOM05D005307 ORTHO05D006695 5.0e-176 622.9 586 66.7
Cc03_g08380 Coffea canephora HOM05D005307 ORTHO05D006695 7.3e-175 619.0 561 69.7
Lj3C779T0 Lonicera japonica HOM05D005307 ORTHO05D006695 7.3e-175 619.0 501 70.1
MSTRG.4240 Avicennia marina HOM05D005307 ORTHO05D006695 3.4e-172 610.1 585 67.2
Potri.001G319000 Populus trichocarpa HOM05D005307 ORTHO05D006695 3.4e-172 610.1 712 65.0
SalBow8G0791 Salvia bowleyana HOM05D005307 ORTHO05D006695 9.8e-172 608.6 595 66.2
Sc13g0000330 Simmondsia chinensis HOM05D005307 ORTHO05D006695 7.0e-170 602.4 832 54.8
BcaB06g26551 Brassica carinata HOM05D005307 ORTHO05D006695 6.0e-169 599.4 557 63.9
AUR62020854 Chenopodium quinoa HOM05D005307 ORTHO05D006695 1.3e-168 598.2 501 72.3
Phvul.003G050400 Phaseolus vulgaris HOM05D005307 ORTHO05D006695 1.3e-168 598.2 724 57.7
SHI06461 Sapria himalayana HOM05D005307 ORTHO05D006695 1.3e-168 598.2 775 52.8
ATR0561G218 Amborella trichopoda HOM05D005307 ORTHO05D006695 2.3e-168 597.4 507 68.2
Oeu002923.1 Olea europaea HOM05D005307 ORTHO05D006695 6.6e-168 595.9 681 57.1
AT3G23900 Arabidopsis thaliana HOM05D005307 ORTHO05D006695 3.3e-167 593.6 567 66.1
HPP92_024208 Vanilla planifolia HOM05D005307 ORTHO05D006695 3.3e-167 593.6 505 68.7
Migut.G00755 Erythranthe guttata HOM05D005307 ORTHO05D006695 1.1e-165 588.6 735 57.0
Solyc09g092250.3 Solanum lycopersicum HOM05D005307 ORTHO05D006695 1.8e-165 587.8 512 67.8
Sopen09g035180 Solanum pennellii HOM05D005307 ORTHO05D006695 2.3e-165 587.4 513 67.8
PGSC0003DMG400024356 Solanum tuberosum HOM05D005307 ORTHO05D006695 2.3e-165 587.4 710 58.7
BraA07t28636Z Brassica rapa HOM05D005307 ORTHO05D006695 5.2e-165 586.3 504 66.7
Carub.0003s2420 Capsella rubella HOM05D005307 ORTHO05D006695 6.8e-165 585.9 555 65.8
AL3G38890 Arabidopsis lyrata HOM05D005307 ORTHO05D006695 1.2e-164 585.1 575 64.7
Nitab4.5_0000697g0080 Nicotiana tabacum HOM05D005307 ORTHO05D006695 1.2e-164 585.1 733 56.6
CARHR099860 Cardamine hirsuta HOM05D005307 ORTHO05D006695 2.0e-164 584.3 580 63.6
A07p08510 Brassica napus HOM05D005307 ORTHO05D006695 9.8e-164 582.0 504 66.5
Aqoxy2G03944 Aquilegia oxysepala HOM05D005307 ORTHO05D006695 2.2e-163 580.9 544 65.6
AUR62018565 Chenopodium quinoa HOM05D005307 ORTHO05D006695 2.9e-163 580.5 741 56.3
Nitab4.5_0002223g0040 Nicotiana tabacum HOM05D005307 ORTHO05D006695 3.7e-163 580.1 734 56.1
C07p13250 Brassica napus HOM05D005307 ORTHO05D006695 4.9e-163 579.7 544 63.2
BolC7t41817H Brassica oleracea HOM05D005307 ORTHO05D006695 4.9e-163 579.7 544 63.2
CDE05G3407 Ceratophyllum demersum HOM05D005307 ORTHO05D006695 1.1e-162 578.6 501 68.9
BcaC06g35584 Brassica carinata HOM05D005307 ORTHO05D006695 1.4e-162 578.2 544 63.1
vmacro00443 Vaccinium macrocarpon HOM05D005307 ORTHO05D006695 1.6e-161 574.7 502 68.7
CDE05G2932 Ceratophyllum demersum HOM05D005307 ORTHO05D006695 3.5e-161 573.5 500 68.2
SGA_v2.0_scaffold19G08778 Striga asiatica HOM05D005307 ORTHO05D006695 2.8e-158 563.9 715 56.9
Oeu043443.2 Olea europaea HOM05D005307 ORTHO05D006695 4.7e-158 563.1 561 66.1
unitig_899.g14865 Utricularia gibba HOM05D005307 ORTHO05D006695 1.5e-156 558.1 514 65.8
PSO063G4654 Papaver somniferum HOM05D005307 ORTHO05D006695 2.7e-153 547.4 516 67.4
PSO017G6801 Papaver somniferum HOM05D005307 ORTHO05D006695 1.1e-151 542.0 516 67.1
Aa31LG8G10470 Aethionema arabicum HOM05D005307 ORTHO05D006695 4.7e-150 536.6 704 55.3
Lalb_Chr07g0186791 Lupinus albus HOM05D005307 ORTHO05D006695 9.6e-143 512.3 504 66.1
Peaxi162Scf00047g00141 Petunia axillaris HOM05D005307 ORTHO05D006695 3.6e-142 510.4 733 51.8
CAN.G1155.22 Capsicum annuum HOM05D005307 ORTHO05D006695 1.1e-135 488.8 630 56.3
CiPaw.01G117700 Carya illinoinensis HOM05D005307 ORTHO05D006695 3.0e-120 437.6 393 72.0
Zm00001eb334080 Zea mays HOM05D005307 ORTHO05D006695 3.9e-120 437.2 507 57.6
Cpa.g.sc83.42 Carica papaya HOM05D005307 ORTHO05D006695 8.4e-115 419.5 578 57.6
Zm00001eb127130 Zea mays HOM05D005307 ORTHO05D006695 1.6e-113 415.2 512 53.3
SalBow8G0142 Salvia bowleyana HOM05D005307 ORTHO05D006695 7.9e-113 412.9 284 73.2
Os01g0101600 Oryza sativa ssp. japonica HOM05D005307 ORTHO05D006695 1.3e-112 412.1 575 51.8
MBI07_g27653_MAGBIO Magnolia biondii HOM05D005307 ORTHO05D006695 1.0e-107 396.0 289 68.5
TAR625G1365 Trochodendron aralioides HOM05D005307 ORTHO05D006695 2.7e-89 334.7 205 77.1
CBR_g48000 Chara braunii HOM05D005307 ORTHO05D006695 2.0e-87 328.6 535 48.4
Mapoly0002s0028 Marchantia polymorpha HOM05D005307 ORTHO05D006695 5.3e-85 320.5 513 46.2
Pp3c24_4280 Physcomitrium patens HOM05D005307 ORTHO05D006695 3.0e-72 278.1 504 45.0
Pp3c8_5960 Physcomitrium patens HOM05D005307 ORTHO05D006695 3.4e-71 274.6 503 45.3
Hund24403 Selenicereus undatus HOM05D005307 ORTHO05D006695 7.5e-71 273.5 177 77.4
C01p39750 Brassica napus HOM05D005307 ORTHO05D006695 5.0e-67 260.8 508 44.3
SEGI_03012 Sequoiadendron giganteum HOM05D005307 ORTHO05D006695 2.1e-65 255.4 236 55.5
BolC1t03929H Brassica oleracea HOM05D005307 ORTHO05D006695 5.7e-63 247.3 300 56.7
A01p31200 Brassica napus HOM05D005307 ORTHO05D006695 2.4e-61 241.9 289 58.5
Cpa.g.sc83.41 Carica papaya HOM05D005307 ORTHO05D006695 3.9e-59 234.6 178 69.1
SalBow8G1782 Salvia bowleyana HOM05D005307 ORTHO05D006695 4.3e-58 231.1 229 72.1
arahy.Tifrunner.gnm1.ann1.K4I8TV Arachis hypogaea HOM05D005307 ORTHO05D006695 1.4e-56 226.1 221 65.2
Lj3A756G29 Lonicera japonica HOM05D005307 ORTHO05D006695 8.9e-56 223.4 234 63.2
Actinidia33177 Actinidia chinensis HOM05D005307 ORTHO05D006695 3.7e-46 191.4 464 43.3
Lj3A756G30 Lonicera japonica HOM05D005307 ORTHO05D006695 3.6e-25 121.7 69 87.0
Actinidia33176 Actinidia chinensis HOM05D005307 ORTHO05D006695 6.9e-24 117.5 141 53.2
arahy.Tifrunner.gnm1.ann1.H01PAW Arachis hypogaea HOM05D005307 ORTHO05D006695 1.9e-21 109.4 58 89.7
BcaC03g15749 Brassica carinata HOM05D005307 ORTHO05D006695 7.1e-21 107.5 76 67.1
BolC2t09503H Brassica oleracea HOM05D005307 ORTHO05D006695 2.1e-20 105.9 86 62.8
Cre16.g672150 Chlamydomonas reinhardtii HOM05D005307 ORTHO05D006695 7.3e-18 97.4 228 35.1
BraA02t07152Z Brassica rapa HOM05D005307 ORTHO05D006695 1.8e-16 92.8 98 54.1
Lj3C756T3 Lonicera japonica HOM05D005307 ORTHO05D006695 1.8e-16 92.8 87 65.5
BolC2t09502H Brassica oleracea HOM05D005307 ORTHO05D006695 1.5e-15 89.7 95 55.8
MCO02G402 Micromonas commoda HOM05D005307 ORTHO05D006695 4.9e-14 84.7 432 24.8
C02p34830 Brassica napus HOM05D005307 ORTHO05D006695 8.4e-14 84.0 98 52.0
BraA02t07151Z Brassica rapa HOM05D005307 ORTHO05D027550 3.2e-13 82.0 188 43.1
arahy.Tifrunner.gnm1.ann1.V8QUIX Arachis hypogaea HOM05D000659 ORTHO05D006695 1.8e-11 76.3 66 80.3
Psat7g074680 Pisum sativum HOM05D005307 ORTHO05D006695 1.8e-11 76.3 155 40.0
AagrBONN_evm.TU.Sc2ySwM_344.2987 Anthoceros agrestis HOM05D005307 ORTHO05D006695 1.5e-07 63.2 95 54.7
Mapoly0001s0473 Marchantia polymorpha HOM05D042108 ORTHO05D048733 1.3e-06 60.1 102 53.9
Gohir.A01G041600 Gossypium hirsutum HOM05D001023 ORTHO05D000912 6.5e-06 57.8 114 37.7
Gohir.A04G047000 Gossypium hirsutum HOM05D001023 ORTHO05D000912 6.5e-06 57.8 98 37.8
Gorai.002G038400 Gossypium raimondii HOM05D001023 ORTHO05D000912 6.5e-06 57.8 114 37.7
Gorai.009G358300 Gossypium raimondii HOM05D001023 ORTHO05D000912 6.5e-06 57.8 98 37.8
arahy.Tifrunner.gnm1.ann1.6FDN0X Arachis hypogaea HOM05D001023 ORTHO05D000912 8.4e-06 57.4 98 38.8
Gohir.A11G291200 Gossypium hirsutum HOM05D001023 ORTHO05D000912 8.4e-06 57.4 114 37.7
Gohir.D11G301400 Gossypium hirsutum HOM05D001023 ORTHO05D000912 8.4e-06 57.4 114 37.7
Gorai.007G335300 Gossypium raimondii HOM05D001023 ORTHO05D000912 8.4e-06 57.4 114 37.7
Phvul.009G046200 Phaseolus vulgaris HOM05D001023 ORTHO05D000912 8.4e-06 57.4 101 39.6


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