Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG03G011350 Citrullus lanatus HOM05D002281 ORTHO05D006774 1.1e-142 510.0 259 100.0
CsaV3_1G044940 Cucumis sativus L. HOM05D002281 ORTHO05D006774 1.7e-124 449.5 252 90.9
MELO3C010108.2 Cucumis melo HOM05D002281 ORTHO05D006774 2.9e-124 448.7 252 90.5
Sed0014107 Sechium edule HOM05D002281 ORTHO05D006774 2.5e-123 445.7 251 90.0
Medtr1g079525 Medicago truncatula HOM05D002281 ORTHO05D006774 2.9e-95 352.4 223 79.4
TPR.G31600 Trifolium pratense HOM05D002281 ORTHO05D006774 3.8e-95 352.1 249 71.9
Ca_09982_v3 Cicer arietinum L. HOM05D002281 ORTHO05D006774 2.4e-94 349.4 222 80.6
Haze_04483 Corylus avellana HOM05D002281 ORTHO05D006774 2.4e-94 349.4 245 74.7
Psat6g141840 Pisum sativum HOM05D002281 ORTHO05D006774 7.1e-94 347.8 245 73.9
Cpa.g.sc51.34 Carica papaya HOM05D002281 ORTHO05D006774 9.2e-94 347.4 254 70.9
GSVIVG01026351001 Vitis vinifera HOM05D002281 ORTHO05D006774 1.7e-92 343.2 253 70.8
VMungo0720G2591 Vigna mungo HOM05D002281 ORTHO05D006774 3.0e-92 342.4 254 70.5
Cfa006305 Carpinus fangiana HOM05D002281 ORTHO05D006774 3.9e-92 342.0 245 73.5
CiPaw.07G076800 Carya illinoinensis HOM05D002281 ORTHO05D006774 5.1e-92 341.7 192 87.5
Prupe.6G354700 Prunus persica HOM05D002281 ORTHO05D006774 6.6e-92 341.3 220 78.2
TAR365G0274 Trochodendron aralioides HOM05D002281 ORTHO05D006774 1.1e-91 340.5 192 86.5
AUR62006996 Chenopodium quinoa HOM05D002281 ORTHO05D006774 3.3e-91 339.0 253 71.5
RcHm_v2.0_Chr3g0448921 Rosa chinensis HOM05D002281 ORTHO05D006774 3.3e-91 339.0 189 86.8
Aqoxy2G03815 Aquilegia oxysepala HOM05D002281 ORTHO05D006774 7.3e-91 337.8 233 74.2
Gohir.A13G103100 Gossypium hirsutum HOM05D002281 ORTHO05D006774 7.3e-91 337.8 258 67.1
EL10Ac4g09786 Beta vulgaris HOM05D002281 ORTHO05D006774 9.6e-91 337.4 254 71.3
Manes.09G145600 Manihot esculenta HOM05D002281 ORTHO05D006774 1.2e-90 337.0 192 83.9
CARHR078410 Cardamine hirsuta HOM05D002281 ORTHO05D006774 1.6e-90 336.7 236 72.0
Gohir.D13G106200 Gossypium hirsutum HOM05D002281 ORTHO05D006774 2.8e-90 335.9 192 83.9
Gorai.013G119100 Gossypium raimondii HOM05D002281 ORTHO05D006774 2.8e-90 335.9 192 83.9
CANSAT54G2391 Cannabis sativa HOM05D002281 ORTHO05D006774 1.1e-89 334.0 256 69.9
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 1.1e-89 334.0 253 70.4
A01p40910 Brassica napus HOM05D002281 ORTHO05D006774 1.4e-89 333.6 234 73.1
BNapus_Darmor_BZH_scaffold_78p00800 Brassica napus HOM05D002281 ORTHO05D006774 1.4e-89 333.6 234 73.1
BraA01t04526Z Brassica rapa HOM05D002281 ORTHO05D006774 1.4e-89 333.6 234 73.1
Thecc.05G264900 Theobroma cacao HOM05D002281 ORTHO05D006774 1.4e-89 333.6 192 82.8
AT3G04260 Arabidopsis thaliana HOM05D002281 ORTHO05D006774 1.8e-89 333.2 234 72.2
arahy.Tifrunner.gnm1.ann1.BY82ZN Arachis hypogaea HOM05D002281 ORTHO05D006774 1.8e-89 333.2 222 76.1
TWI60G1049 Tripterygium wilfordii HOM05D002281 ORTHO05D006774 1.8e-89 333.2 225 74.7
arahy.Tifrunner.gnm1.ann1.76MSW2 Arachis hypogaea HOM05D002281 ORTHO05D006774 2.4e-89 332.8 255 69.0
AUR62000641 Chenopodium quinoa HOM05D002281 ORTHO05D006774 2.4e-89 332.8 253 70.8
Hma1.2p1_0123F.1_g058090 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 4.0e-89 332.0 225 73.8
AL3G14240 Arabidopsis lyrata HOM05D002281 ORTHO05D006774 5.3e-89 331.6 234 72.6
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 5.3e-89 331.6 189 84.7
Sopen04g021370 Solanum pennellii HOM05D002281 ORTHO05D006774 5.3e-89 331.6 241 73.0
Aa31LG5G14740 Aethionema arabicum HOM05D002281 ORTHO05D006774 6.9e-89 331.3 236 72.0
COL.COLO4_38180 Corchorus olitorius HOM05D002281 ORTHO05D006774 6.9e-89 331.3 192 82.3
FvH4_6g01350 Fragaria vesca HOM05D002281 ORTHO05D006774 6.9e-89 331.3 259 68.3
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 9.0e-89 330.9 259 68.3
Solyc04g050540.4 Solanum lycopersicum HOM05D002281 ORTHO05D006774 1.2e-88 330.5 241 72.6
Nn3g19861 Nelumbo nucifera HOM05D002281 ORTHO05D006774 1.5e-88 330.1 192 82.8
Phvul.L002432 Phaseolus vulgaris HOM05D002281 ORTHO05D006774 1.5e-88 330.1 245 67.8
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 2.0e-88 329.7 255 69.0
Lj2C48G13 Lonicera japonica HOM05D002281 ORTHO05D006774 2.0e-88 329.7 238 69.7
Ah.13g065840 Amaranthus hybridus HOM05D002281 ORTHO05D006774 5.8e-88 328.2 237 72.6
Ciclev10023441m.g Citrus clementina HOM05D002281 ORTHO05D006774 7.6e-88 327.8 232 73.3
Potri.019G025100 Populus trichocarpa HOM05D002281 ORTHO05D006774 7.6e-88 327.8 240 69.6
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 9.9e-88 327.4 259 68.0
Atru.chr2.1137 Acer truncatum HOM05D002281 ORTHO05D006774 1.3e-87 327.0 236 72.0
BcaC09g47811 Brassica carinata HOM05D002281 ORTHO05D006774 1.7e-87 326.6 233 73.0
CAN.G131.14 Capsicum annuum HOM05D002281 ORTHO05D006774 1.7e-87 326.6 218 76.6
Dinv05783 Davidia involucrata HOM05D002281 ORTHO05D006774 2.9e-87 325.9 214 76.6
Carub.0003s0347 Capsella rubella HOM05D002281 ORTHO05D006774 6.4e-87 324.7 234 71.8
Glyma.10G168600 Glycine max HOM05D002281 ORTHO05D006774 6.4e-87 324.7 254 66.5
Glyma.20G221100 Glycine max HOM05D002281 ORTHO05D006774 6.4e-87 324.7 254 67.7
PGR142G3453 Punica granatum HOM05D002281 ORTHO05D006774 6.4e-87 324.7 193 82.4
Oeu001246.1 Olea europaea HOM05D002281 ORTHO05D006774 1.9e-86 323.2 230 72.2
Thhalv10020015m.g Eutrema salsugineum HOM05D002281 ORTHO05D006774 3.2e-86 322.4 237 70.9
Migut.F02048 Erythranthe guttata HOM05D002281 ORTHO05D006774 4.2e-86 322.0 242 68.6
THA.LOC104820754 Tarenaya hassleriana HOM05D002281 ORTHO05D006774 4.2e-86 322.0 233 71.7
Actinidia06827 Actinidia chinensis HOM05D002281 ORTHO05D006774 9.3e-86 320.9 258 65.9
Nitab4.5_0006530g0020 Nicotiana tabacum HOM05D002281 ORTHO05D006774 1.2e-85 320.5 224 74.1
Sabra19G0034700 Salix brachista HOM05D002281 ORTHO05D006774 1.6e-85 320.1 192 79.7
Eucgr.B02168 Eucalyptus grandis HOM05D002281 ORTHO05D006774 2.1e-85 319.7 193 80.3
CSS0040843 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 2.7e-85 319.3 233 69.1
Actinidia39975 Actinidia chinensis HOM05D002281 ORTHO05D006774 4.6e-85 318.5 196 79.1
Sp3g03170 Schrenkiella parvula HOM05D002281 ORTHO05D006774 4.6e-85 318.5 265 65.3
Hund07166 Selenicereus undatus HOM05D002281 ORTHO05D006774 1.0e-84 317.4 243 68.7
Nitab4.5_0001498g0040 Nicotiana tabacum HOM05D002281 ORTHO05D006774 1.3e-84 317.0 223 73.1
Lalb_Chr21g0311311 Lupinus albus HOM05D002281 ORTHO05D006774 2.3e-84 316.2 192 80.2
Cc09_g03090 Coffea canephora HOM05D002281 ORTHO05D006774 5.1e-84 315.1 193 78.2
Peaxi162Scf00071g00258 Petunia axillaris HOM05D002281 ORTHO05D006774 6.6e-84 314.7 248 68.1
PSO063G1810 Papaver somniferum HOM05D002281 ORTHO05D006774 8.7e-84 314.3 193 80.8
HPP92_025553 Vanilla planifolia HOM05D002281 ORTHO05D006774 1.1e-83 313.9 211 74.9
ATR0787G153 Amborella trichopoda HOM05D002281 ORTHO05D006774 5.6e-83 311.6 212 72.6
SGA_v2.0_scaffold62G21474 Striga asiatica HOM05D002281 ORTHO05D006774 1.3e-82 310.5 229 70.3
MSTRG.27429 Avicennia marina HOM05D002281 ORTHO05D006774 1.6e-82 310.1 263 63.1
Lsat_1_v5_gn_2_16580 Lactuca sativa HOM05D002281 ORTHO05D006774 2.8e-82 309.3 193 77.7
Lj5g0010111 Lotus japonicus HOM05D002281 ORTHO05D006774 6.9e-81 304.7 221 73.8
PSO017G1794 Papaver somniferum HOM05D002281 ORTHO05D006774 1.2e-80 303.9 192 78.1
Zm00001eb046590 Zea mays HOM05D002281 ORTHO05D006774 1.2e-80 303.9 191 77.0
Os10g0462800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D006774 1.5e-80 303.5 191 76.4
unitig_899.g14420 Utricularia gibba HOM05D002281 ORTHO05D006774 7.6e-80 301.2 192 76.0
HanXRQChr14g0434631 Helianthus annuus HOM05D002281 ORTHO05D006774 1.3e-79 300.4 194 74.2
vmacro19969 Vaccinium macrocarpon HOM05D002281 ORTHO05D006774 1.4e-78 297.0 192 74.5
MD04G1234900 Malus domestica HOM05D002281 ORTHO05D006774 3.2e-78 295.8 256 63.7
ECA238G3638 Erigeron canadensis HOM05D002281 ORTHO05D006774 2.5e-75 286.2 181 77.3
BcaNung04817 Brassica carinata HOM05D002281 ORTHO05D006774 9.0e-73 277.7 259 58.3
DCAR_027530 Daucus carota HOM05D002281 ORTHO05D006774 8.4e-71 271.2 251 59.8
SEGI_16679 Sequoiadendron giganteum HOM05D002281 ORTHO05D006774 1.0e-63 247.7 197 64.0
CDE02G1511 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 3.3e-59 232.6 130 86.9
AagrBONN_evm.TU.Sc2ySwM_368.3437 Anthoceros agrestis HOM05D002281 ORTHO05D006774 1.7e-55 220.3 228 50.4
Hma1.2p1_0463F.1_g158160 Hydrangea macrophylla HOM05D002281 ORTHO05D006774 1.5e-51 207.2 134 75.4
Mapoly0031s0123 Marchantia polymorpha HOM05D002281 ORTHO05D006774 4.3e-51 205.7 189 53.4
SMO367G1266 Selaginella moellendorffii HOM05D002281 ORTHO05D006774 5.7e-51 205.3 191 52.4
Pp3c1_8170 Physcomitrium patens HOM05D002281 ORTHO05D006774 1.6e-32 144.1 189 39.2
CDE08G0752 Ceratophyllum demersum HOM05D002281 ORTHO05D006774 2.6e-19 100.1 64 73.4
Os10g0460900 Oryza sativa ssp. japonica HOM05D006403 ORTHO05D008130 4.1e-17 92.8 72 65.3
Os10g0461100 Oryza sativa ssp. japonica HOM05D002933 ORTHO05D007742 4.1e-17 92.8 72 65.3
CSS0012562 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D006774 2.0e-11 73.9 106 44.3
TPR.G31597 Trifolium pratense HOM05D002281 ORTHO05D006774 1.2e-08 64.7 73 45.2
FvH4_6g01352 Fragaria vesca HOM05D002281 ORTHO05D006774 2.0e-08 63.9 90 44.4


User provided reference genes

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