Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ClCG02G010730 Citrullus lanatus HOM05D006835 ORTHO05D008587 7.5e-108 394.0 226 100.0
CiPaw.06G113200 Carya illinoinensis HOM05D006835 ORTHO05D008587 5.3e-37 158.7 264 47.3
MELO3C015685.2 Cucumis melo HOM05D006835 ORTHO05D008587 5.3e-37 158.7 296 43.9
ClCG02G003170 Citrullus lanatus HOM05D006835 ORTHO05D008587 7.7e-36 154.8 296 43.2
CsaV3_7G002240 Cucumis sativus L. HOM05D006835 ORTHO05D008587 2.2e-35 153.3 296 42.9
Duzib132G0412 Durio zibethinus HOM05D006835 ORTHO05D008587 2.2e-35 153.3 296 43.6
Dinv41853 Davidia involucrata HOM05D006835 ORTHO05D008587 3.2e-34 149.4 292 43.8
Thecc.02G149200 Theobroma cacao HOM05D006835 ORTHO05D008587 7.9e-33 144.8 296 42.6
Sed0006636 Sechium edule HOM05D006835 ORTHO05D008587 3.9e-32 142.5 296 41.6
Ciclev10028825m.g Citrus clementina HOM05D006835 ORTHO05D008587 5.1e-32 142.1 296 41.6
CDE04G0383 Ceratophyllum demersum HOM05D006835 ORTHO05D008587 6.7e-32 141.7 254 47.2
Manes.15G113100 Manihot esculenta HOM05D006835 ORTHO05D008587 1.5e-31 140.6 295 41.4
PGR042G3426 Punica granatum HOM05D006835 ORTHO05D008587 1.3e-30 137.5 296 40.5
COL.COLO4_04808 Corchorus olitorius HOM05D006835 ORTHO05D008587 1.7e-30 137.1 296 41.6
Haze_01949 Corylus avellana HOM05D006835 ORTHO05D008587 3.7e-30 136.0 297 40.1
Gohir.A13G063900 Gossypium hirsutum HOM05D006835 ORTHO05D008587 4.8e-30 135.6 296 41.6
QL11p057002 Quercus lobata HOM05D006835 ORTHO05D008587 9.1e-29 131.3 295 40.7
MBI15_g25631_MAGBIO Magnolia biondii HOM05D006835 ORTHO05D008587 1.2e-28 131.0 295 40.0
Actinidia17982 Actinidia chinensis HOM05D006835 ORTHO05D008587 1.6e-28 130.6 289 41.5
Gorai.013G065400 Gossypium raimondii HOM05D006835 ORTHO05D008587 2.0e-28 130.2 296 40.9
Rhsim12G0002300 Rhododendron simsii HOM05D006835 ORTHO05D008587 2.0e-28 130.2 296 40.2
TWI75G0734 Tripterygium wilfordii HOM05D006835 ORTHO05D008587 3.5e-28 129.4 93 66.7
Peaxi162Scf00078g00114 Petunia axillaris HOM05D006835 ORTHO05D008587 4.5e-28 129.0 292 40.8
THA.LOC104806593 Tarenaya hassleriana HOM05D006835 ORTHO05D008587 7.7e-28 128.3 286 29.7
Sed0026152 Sechium edule HOM05D006835 ORTHO05D008587 1.3e-27 127.5 296 38.5
Gohir.D13G058000 Gossypium hirsutum HOM05D006835 ORTHO05D008587 1.7e-27 127.1 296 40.5
Lalb_Chr09g0328551 Lupinus albus HOM05D006835 ORTHO05D008587 1.7e-27 127.1 294 39.5
Hma1.2p1_0332F.1_g127850 Hydrangea macrophylla HOM05D006835 ORTHO05D008587 2.9e-27 126.3 295 40.3
Atru.chr5.3592 Acer truncatum HOM05D006835 ORTHO05D008587 8.5e-27 124.8 90 62.2
Prupe.8G183100 Prunus persica HOM05D006835 ORTHO05D008587 8.5e-27 124.8 296 40.5
Nn6g31561 Nelumbo nucifera HOM05D006835 ORTHO05D008587 1.1e-26 124.4 90 67.8
TPR.G31217 Trifolium pratense HOM05D006835 ORTHO05D008587 1.1e-26 124.4 294 38.1
Ah.02g121760 Amaranthus hybridus HOM05D006835 ORTHO05D008587 1.9e-26 123.6 270 35.2
TAR381G0995 Trochodendron aralioides HOM05D006835 ORTHO05D008587 1.9e-26 123.6 94 63.8
FAN27G3385 Fragaria x ananassa HOM05D006835 ORTHO05D008587 3.2e-26 122.9 296 39.9
Sp7g37590 Schrenkiella parvula HOM05D006835 ORTHO05D008587 4.2e-26 122.5 288 37.2
Potri.004G209400 Populus trichocarpa HOM05D006835 ORTHO05D008587 5.5e-26 122.1 296 38.9
Sabra04G0141200 Salix brachista HOM05D006835 ORTHO05D008587 5.5e-26 122.1 296 38.2
Hund06347 Selenicereus undatus HOM05D006835 ORTHO05D008587 9.4e-26 121.3 94 56.4
Sc08g0001990 Simmondsia chinensis HOM05D006835 ORTHO05D008587 9.4e-26 121.3 296 38.9
Thhalv10004546m.g Eutrema salsugineum HOM05D006835 ORTHO05D008587 1.6e-25 120.6 288 37.5
Medtr4g084630 Medicago truncatula HOM05D006835 ORTHO05D008587 1.6e-25 120.6 287 39.0
Lsat_1_v5_gn_1_20201 Lactuca sativa HOM05D006835 ORTHO05D008587 2.1e-25 120.2 94 58.5
Aqoxy6G03057 Aquilegia oxysepala HOM05D006835 ORTHO05D008587 2.7e-25 119.8 297 39.7
ECA247G0195 Erigeron canadensis HOM05D006835 ORTHO05D008587 3.6e-25 119.4 91 58.2
FAN24G3450 Fragaria x ananassa HOM05D006835 ORTHO05D008587 3.6e-25 119.4 296 39.5
Lj4g0005221 Lotus japonicus HOM05D006835 ORTHO05D008587 3.6e-25 119.4 297 38.0
Aa31LG6G16920 Aethionema arabicum HOM05D006835 ORTHO05D008587 4.7e-25 119.0 291 36.4
Carub.0007s0005 Capsella rubella HOM05D006835 ORTHO05D008587 6.1e-25 118.6 288 36.8
GSVIVG01023845001 Vitis vinifera HOM05D006835 ORTHO05D008587 6.1e-25 118.6 88 61.4
EL10Ac9g21569 Beta vulgaris HOM05D006835 ORTHO05D008587 1.0e-24 117.9 94 56.4
Cc05_g09290 Coffea canephora HOM05D006835 ORTHO05D008587 1.0e-24 117.9 293 37.9
RcHm_v2.0_Chr6g0281661 Rosa chinensis HOM05D006835 ORTHO05D008587 1.0e-24 117.9 296 39.2
Psat7g128400 Pisum sativum HOM05D006835 ORTHO05D008587 1.8e-24 117.1 296 37.2
AL7G10060 Arabidopsis lyrata HOM05D006835 ORTHO05D008587 2.3e-24 116.7 288 35.8
Oeu034382.1 Olea europaea HOM05D006835 ORTHO05D008587 3.0e-24 116.3 285 40.4
CAN.G430.3 Capsicum annuum HOM05D006835 ORTHO05D008587 5.2e-24 115.5 87 59.8
vmacro17000 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 5.2e-24 115.5 227 44.5
FvH4_2g17170 Fragaria vesca HOM05D006835 ORTHO05D008587 8.8e-24 114.8 283 39.9
Nitab4.5_0000079g0110 Nicotiana tabacum HOM05D006835 ORTHO05D008587 1.1e-23 114.4 86 60.5
Nitab4.5_0004387g0030 Nicotiana tabacum HOM05D006835 ORTHO05D008587 1.1e-23 114.4 86 60.5
PSO541G0957 Papaver somniferum HOM05D006835 ORTHO05D008587 2.0e-23 113.6 98 56.1
Potri.009G170300 Populus trichocarpa HOM05D006835 ORTHO05D008587 2.6e-23 113.2 286 38.5
arahy.Tifrunner.gnm1.ann1.B8P5ZC Arachis hypogaea HOM05D006835 ORTHO05D008587 3.3e-23 112.8 86 55.8
MSTRG.1776 Avicennia marina HOM05D006835 ORTHO05D008587 3.3e-23 112.8 86 59.3
MD10G1144800 Malus domestica HOM05D006835 ORTHO05D008587 3.3e-23 112.8 283 39.2
CANSAT25G1616 Cannabis sativa HOM05D006835 ORTHO05D008587 4.4e-23 112.5 89 59.6
Cpa.g.sc60.7 Carica papaya HOM05D006835 ORTHO05D008587 7.5e-23 111.7 87 58.6
CANSAT25G2962 Cannabis sativa HOM05D006835 ORTHO05D008587 9.7e-23 111.3 89 59.6
arahy.Tifrunner.gnm1.ann1.9A9DF4 Arachis hypogaea HOM05D006835 ORTHO05D008587 1.7e-22 110.5 296 36.1
arahy.Tifrunner.gnm1.ann1.N15UBW Arachis hypogaea HOM05D006835 ORTHO05D008587 1.7e-22 110.5 296 36.1
Migut.E01343 Erythranthe guttata HOM05D006835 ORTHO05D008587 2.2e-22 110.2 94 56.4
ATR0605G237 Amborella trichopoda HOM05D006835 ORTHO05D008587 2.8e-22 109.8 292 38.0
Sopen11g019950 Solanum pennellii HOM05D006835 ORTHO05D008587 2.8e-22 109.8 86 58.1
PGSC0003DMG400023133 Solanum tuberosum HOM05D006835 ORTHO05D008587 2.8e-22 109.8 86 58.1
AUR62010216 Chenopodium quinoa HOM05D006835 ORTHO05D008587 4.8e-22 109.0 95 53.7
arahy.Tifrunner.gnm1.ann1.ATV9YP Arachis hypogaea HOM05D006835 ORTHO05D008587 6.3e-22 108.6 86 54.7
SalBow8G5127 Salvia bowleyana HOM05D006835 ORTHO05D008587 6.3e-22 108.6 83 57.8
Eucgr.H05012 Eucalyptus grandis HOM05D006835 ORTHO05D008587 8.2e-22 108.2 87 57.5
Glyma.13G141500 Glycine max HOM05D006835 ORTHO05D008587 8.2e-22 108.2 87 54.0
unitig_744.g24691 Utricularia gibba HOM05D006835 ORTHO05D008587 8.2e-22 108.2 88 55.7
AT4G38160 Arabidopsis thaliana HOM05D006835 ORTHO05D008587 1.1e-21 107.8 86 57.0
Ah.01g010510 Amaranthus hybridus HOM05D006835 ORTHO05D008587 1.8e-21 107.1 89 53.9
CARHR293940 Cardamine hirsuta HOM05D006835 ORTHO05D008587 2.4e-21 106.7 289 34.9
AUR62013212 Chenopodium quinoa HOM05D006835 ORTHO05D008587 3.1e-21 106.3 95 51.6
Lsat_1_v5_gn_8_70721 Lactuca sativa HOM05D006835 ORTHO05D008587 1.2e-20 104.4 102 51.0
Solyc11g044360.3 Solanum lycopersicum HOM05D006835 ORTHO05D008587 1.6e-20 104.0 77 62.3
Atru.BG.81.p Acer truncatum HOM05D006835 ORTHO05D008587 2.0e-20 103.6 75 64.0
Glyma.10G054400 Glycine max HOM05D006835 ORTHO05D008587 2.7e-20 103.2 86 52.3
Ca_18740_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 3.5e-20 102.8 86 53.5
Ca_30877_v3 Cicer arietinum L. HOM05D006835 ORTHO05D008587 3.5e-20 102.8 86 53.5
CSS0013930 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 4.5e-20 102.4 185 51.9
A03p48790 Brassica napus HOM05D006835 ORTHO05D008587 7.7e-20 101.7 92 52.2
BraA03t13979Z Brassica rapa HOM05D006835 ORTHO05D008587 7.7e-20 101.7 92 52.2
DCAR_006210 Daucus carota HOM05D006835 ORTHO05D008587 1.3e-19 100.9 134 41.8
C07p46880 Brassica napus HOM05D006835 ORTHO05D008587 3.8e-19 99.4 92 51.1
BolC7t45204H Brassica oleracea HOM05D006835 ORTHO05D008587 3.8e-19 99.4 92 51.1
SGA_v2.0_scaffold144G35876 Striga asiatica HOM05D006835 ORTHO05D008587 3.8e-19 99.4 85 52.9
CsaV3_6G009960 Cucumis sativus L. HOM05D064228 ORTHO05D045021 6.5e-19 98.6 137 45.3
FAN15G1646 Fragaria x ananassa HOM05D006835 ORTHO05D008587 2.5e-18 96.7 78 59.0
Os08g0515800 Oryza sativa ssp. japonica HOM05D006835 ORTHO05D008587 1.4e-16 90.9 298 34.2
VMungo1309G0603 Vigna mungo HOM05D006835 ORTHO05D008587 1.4e-16 90.9 75 50.7
Phvul.007G148200 Phaseolus vulgaris HOM05D006835 ORTHO05D008587 2.3e-16 90.1 86 45.3
TPR.G38303 Trifolium pratense HOM05D006835 ORTHO05D008587 4.0e-16 89.4 293 35.2
MD05G1145000 Malus domestica HOM05D006835 ORTHO05D008587 1.3e-14 84.3 265 37.4
vmacro17159 Vaccinium macrocarpon HOM05D006835 ORTHO05D008587 2.8e-14 83.2 178 34.3
SalBow8G1833 Salvia bowleyana HOM05D006835 ORTHO05D008587 4.8e-14 82.4 63 60.3
Actinidia20590 Actinidia chinensis HOM05D006835 ORTHO05D008587 3.5e-12 76.3 48 77.1
CSS0014591 Camellia sinensis var. sinensis HOM05D006835 ORTHO05D008587 3.8e-11 72.8 264 36.7
Mapoly0002s0171 Marchantia polymorpha HOM05D005605 ORTHO05D001299 2.8e-06 56.6 202 33.7
AagrBONN_evm.TU.Sc2ySwM_344.3279 Anthoceros agrestis HOM05D006835 ORTHO05D008587 3.7e-06 56.2 74 35.1
SalBow3G3248 Salvia bowleyana HOM05D006835 ORTHO05D008587 4.9e-06 55.8 45 57.8
SalBow4G0758 Salvia bowleyana HOM05D006835 ORTHO05D008587 4.9e-06 55.8 45 57.8
AagrBONN_evm.TU.Sc2ySwM_368.2733 Anthoceros agrestis HOM05D005605 ORTHO05D001299 8.3e-06 55.1 187 35.8


User provided reference genes

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