Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10033677m.g Citrus clementina HOM05D003724 ORTHO05D004367 3.1e-282 974.5 520 100.0
Atru.chr11.2319 Acer truncatum HOM05D003724 ORTHO05D004367 7.1e-186 654.4 604 64.6
Cpa.g.sc43.54 Carica papaya HOM05D003724 ORTHO05D004367 4.6e-185 651.7 608 61.5
Thecc.02G209200 Theobroma cacao HOM05D003724 ORTHO05D004367 1.3e-179 633.6 594 61.4
Dinv10959 Davidia involucrata HOM05D003724 ORTHO05D004367 3.0e-176 622.5 600 59.5
Potri.003G173200 Populus trichocarpa HOM05D003724 ORTHO05D004367 3.0e-176 622.5 590 62.7
FvH4_4g23800 Fragaria vesca HOM05D003724 ORTHO05D004367 3.3e-175 619.0 602 59.5
Actinidia30650 Actinidia chinensis HOM05D003724 ORTHO05D004367 2.8e-174 615.9 578 62.5
Potri.001G055201 Populus trichocarpa HOM05D003724 ORTHO05D004367 3.7e-174 615.5 606 59.1
RcHm_v2.0_Chr4g0430341 Rosa chinensis HOM05D003724 ORTHO05D004367 4.8e-174 615.1 611 58.6
Actinidia08073 Actinidia chinensis HOM05D003724 ORTHO05D004367 8.1e-174 614.4 596 60.7
CANSAT01G0850 Cannabis sativa HOM05D003724 ORTHO05D004367 1.1e-173 614.0 596 60.4
TWI75G0323 Tripterygium wilfordii HOM05D003724 ORTHO05D004367 6.9e-173 611.3 596 59.7
CiPaw.05G110100 Carya illinoinensis HOM05D003724 ORTHO05D004367 7.6e-172 607.8 596 60.1
FAN22G0779 Fragaria x ananassa HOM05D003724 ORTHO05D004367 7.6e-172 607.8 602 58.8
Prupe.1G226200 Prunus persica HOM05D003724 ORTHO05D004367 7.6e-172 607.8 611 60.7
MD16G1118900 Malus domestica HOM05D003724 ORTHO05D004367 3.8e-171 605.5 623 57.0
Gorai.005G167400 Gossypium raimondii HOM05D003724 ORTHO05D004367 4.9e-171 605.1 594 58.9
QL03p052803 Quercus lobata HOM05D003724 ORTHO05D004367 4.9e-171 605.1 613 58.7
Gohir.A03G126400 Gossypium hirsutum HOM05D003724 ORTHO05D004367 6.5e-171 604.7 594 58.6
FAN17G0970 Fragaria x ananassa HOM05D003724 ORTHO05D004367 2.5e-170 602.8 636 56.8
Rhsim12G0026000 Rhododendron simsii HOM05D003724 ORTHO05D004367 2.7e-169 599.4 613 58.7
Lj3C1068T3 Lonicera japonica HOM05D003724 ORTHO05D004367 1.3e-168 597.0 593 59.7
RcHm_v2.0_Chr4g0430291 Rosa chinensis HOM05D003724 ORTHO05D004367 1.8e-168 596.7 611 57.4
Sabra03G0126700 Salix brachista HOM05D003724 ORTHO05D004367 1.1e-167 594.0 587 59.5
MELO3C010743.2 Cucumis melo HOM05D003724 ORTHO05D004367 1.4e-165 587.0 583 59.2
MD13G1118700 Malus domestica HOM05D003724 ORTHO05D004367 1.4e-165 587.0 613 59.1
PGR102G1478 Punica granatum HOM05D003724 ORTHO05D004367 3.1e-165 585.9 594 57.7
Migut.C00176 Erythranthe guttata HOM05D003724 ORTHO05D004367 2.0e-164 583.2 583 57.5
Sed0021729 Sechium edule HOM05D003724 ORTHO05D004367 1.0e-163 580.9 587 58.3
Nitab4.5_0003981g0060 Nicotiana tabacum HOM05D003724 ORTHO05D004367 3.2e-162 575.9 596 58.1
Aqoxy5G02771 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 1.6e-161 573.5 607 58.6
Gohir.D02G149500 Gossypium hirsutum HOM05D003724 ORTHO05D004367 1.6e-161 573.5 590 57.3
Peaxi162Scf00128g01233 Petunia axillaris HOM05D003724 ORTHO05D004367 7.9e-161 571.2 597 58.3
THA.LOC104825509 Tarenaya hassleriana HOM05D003724 ORTHO05D004367 1.0e-160 570.9 599 55.9
Oeu060814.1 Olea europaea HOM05D003724 ORTHO05D004367 1.3e-160 570.5 608 57.7
Oeu036873.1 Olea europaea HOM05D003724 ORTHO05D004367 1.9e-159 566.6 599 57.3
Aqoxy7G01914 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 2.5e-159 566.2 606 58.1
Medtr3g085380 Medicago truncatula HOM05D003724 ORTHO05D004367 4.3e-159 565.5 596 55.5
TAR374G1082 Trochodendron aralioides HOM05D003724 ORTHO05D004367 7.4e-159 564.7 600 55.3
CsaV3_2G025450 Cucumis sativus L. HOM05D003724 ORTHO05D004367 1.6e-158 563.5 585 57.4
Solyc04g007330.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 2.8e-158 562.8 590 57.3
Sopen04g002390 Solanum pennellii HOM05D003724 ORTHO05D004367 8.2e-158 561.2 581 58.3
Migut.K00732 Erythranthe guttata HOM05D003724 ORTHO05D004367 5.3e-157 558.5 599 56.3
arahy.Tifrunner.gnm1.ann1.3XH1N1 Arachis hypogaea HOM05D003724 ORTHO05D004367 9.0e-157 557.8 600 55.0
ECA233G0767 Erigeron canadensis HOM05D003724 ORTHO05D004367 2.0e-156 556.6 591 56.2
ClCG08G017130 Citrullus lanatus HOM05D003724 ORTHO05D004367 1.0e-155 554.3 590 55.6
SalBow2G1610 Salvia bowleyana HOM05D003724 ORTHO05D004367 3.8e-155 552.4 596 56.7
CSS0007637 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 1.1e-154 550.8 562 60.3
Lsat_1_v5_gn_8_147680 Lactuca sativa HOM05D003724 ORTHO05D004367 1.4e-154 550.4 572 56.3
Psat5g096280 Pisum sativum HOM05D003724 ORTHO05D004367 4.2e-154 548.9 606 55.0
TPR.G28283 Trifolium pratense HOM05D003724 ORTHO05D004367 7.2e-154 548.1 622 52.7
Lj1g0003468 Lotus japonicus HOM05D003724 ORTHO05D004367 1.2e-153 547.4 586 55.3
PSO478G4090 Papaver somniferum HOM05D003724 ORTHO05D004367 4.6e-153 545.4 578 56.6
SGA_v2.0_scaffold9G04687 Striga asiatica HOM05D003724 ORTHO05D004367 4.6e-153 545.4 603 54.9
Ca_16461_v3 Cicer arietinum L. HOM05D003724 ORTHO05D004367 1.4e-152 543.9 586 54.4
PSO782G1352 Papaver somniferum HOM05D003724 ORTHO05D004367 2.3e-152 543.1 580 55.9
Thhalv10018311m.g Eutrema salsugineum HOM05D003724 ORTHO05D004367 3.9e-152 542.3 584 55.7
Nitab4.5_0002441g0080 Nicotiana tabacum HOM05D003724 ORTHO05D004367 3.9e-152 542.3 637 53.1
Sabra01G0039800 Salix brachista HOM05D003724 ORTHO05D004367 3.9e-152 542.3 605 54.0
HanXRQChr08g0207781 Helianthus annuus HOM05D003724 ORTHO05D004367 7.4e-151 538.1 593 55.5
PSO339G4917 Papaver somniferum HOM05D003724 ORTHO05D004367 2.2e-150 536.6 582 55.7
PSO384G3745 Papaver somniferum HOM05D003724 ORTHO05D004367 2.2e-150 536.6 573 56.0
Hund06087 Selenicereus undatus HOM05D003724 ORTHO05D004367 8.2e-150 534.6 628 51.4
PSO478G5007 Papaver somniferum HOM05D003724 ORTHO05D004367 2.4e-149 533.1 584 55.0
Lj1g0008936 Lotus japonicus HOM05D003724 ORTHO05D004367 3.1e-149 532.7 558 56.8
AL2G25920 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 4.1e-149 532.3 596 54.2
Aa31sc377G30 Aethionema arabicum HOM05D003724 ORTHO05D004367 5.3e-149 531.9 614 52.9
AT1G67370 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 1.5e-148 530.4 593 54.5
CARHR059910 Cardamine hirsuta HOM05D003724 ORTHO05D004367 4.5e-148 528.9 603 52.9
Sp5g22320 Schrenkiella parvula HOM05D003724 ORTHO05D004367 8.5e-147 524.6 580 54.5
Lalb_Chr01g0009271 Lupinus albus HOM05D003724 ORTHO05D004367 3.2e-146 522.7 607 52.4
PSO782G3500 Papaver somniferum HOM05D003724 ORTHO05D004367 5.5e-146 521.9 579 54.9
Glyma.18G006800 Glycine max HOM05D003724 ORTHO05D004367 2.1e-145 520.0 460 61.5
VMungo1383G3407 Vigna mungo HOM05D003724 ORTHO05D004367 2.1e-145 520.0 630 50.3
A07p33960 Brassica napus HOM05D003724 ORTHO05D004367 3.6e-145 519.2 591 54.0
BolC6t39148H Brassica oleracea HOM05D003724 ORTHO05D004367 2.3e-144 516.5 591 53.5
Haze_12416 Corylus avellana HOM05D003724 ORTHO05D004367 3.9e-144 515.8 450 63.1
Lalb_Chr03g0034531 Lupinus albus HOM05D003724 ORTHO05D004367 5.1e-144 515.4 596 52.9
BraA07t31023Z Brassica rapa HOM05D003724 ORTHO05D004367 1.1e-143 514.2 587 53.8
Nitab4.5_0003884g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 1.1e-143 514.2 572 54.4
C06p42900 Brassica napus HOM05D003724 ORTHO05D004367 1.5e-143 513.8 591 53.6
Sc04g0010100 Simmondsia chinensis HOM05D003724 ORTHO05D004367 2.0e-143 513.5 566 55.8
BcaC08g46167 Brassica carinata HOM05D003724 ORTHO05D004367 4.4e-143 512.3 590 52.9
GSVIVG01010479001 Vitis vinifera HOM05D003724 ORTHO05D004367 6.3e-142 508.4 534 57.3
AUR62021613 Chenopodium quinoa HOM05D003724 ORTHO05D004367 1.4e-141 507.3 591 51.9
TAR622G1117 Trochodendron aralioides HOM05D003724 ORTHO05D004367 1.5e-140 503.8 602 51.8
arahy.Tifrunner.gnm1.ann1.QLFJ9Y Arachis hypogaea HOM05D003724 ORTHO05D004367 1.1e-138 497.7 591 51.6
CDE05G2922 Ceratophyllum demersum HOM05D003724 ORTHO05D004367 5.5e-138 495.4 562 52.7
ATR0561G244 Amborella trichopoda HOM05D003724 ORTHO05D004367 1.2e-137 494.2 608 52.6
Nitab4.5_0002699g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 1.2e-137 494.2 564 53.7
EL10Ac6g13492 Beta vulgaris HOM05D003724 ORTHO05D004367 1.6e-137 493.8 583 50.4
PGSC0003DMG400029108 Solanum tuberosum HOM05D003724 ORTHO05D004367 1.8e-136 490.3 559 53.5
Nn3g16465 Nelumbo nucifera HOM05D003724 ORTHO05D004367 8.8e-136 488.0 610 53.3
HPP92_003196 Vanilla planifolia HOM05D003724 ORTHO05D004367 5.7e-135 485.3 595 50.4
AUR62008480 Chenopodium quinoa HOM05D003724 ORTHO05D004367 8.2e-134 481.5 606 49.2
RcHm_v2.0_Chr4g0430321 Rosa chinensis HOM05D003724 ORTHO05D004367 4.5e-132 475.7 525 54.9
Carub.0002s1366 Capsella rubella HOM05D003724 ORTHO05D004367 1.9e-130 470.3 559 52.1
Cc09_g04930 Coffea canephora HOM05D003724 ORTHO05D004367 1.9e-130 470.3 536 54.3
MBI06_g46773_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 3.4e-127 459.5 396 63.9
Ah.01g020690 Amaranthus hybridus HOM05D003724 ORTHO05D004367 5.7e-127 458.8 594 47.6
Sed0012468 Sechium edule HOM05D003724 ORTHO05D004367 1.0e-123 448.0 551 50.8
Os09g0506800 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 1.3e-123 447.6 588 48.1
vmacro01062 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 1.7e-123 447.2 391 63.7
CSS0039632 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 2.2e-123 446.8 320 74.4
Manes.12G011600 Manihot esculenta HOM05D003724 ORTHO05D004367 6.5e-123 445.3 318 73.3
Zm00001eb102420 Zea mays HOM05D003724 ORTHO05D004367 3.6e-121 439.5 601 46.4
Glyma.11G250400 Glycine max HOM05D003724 ORTHO05D004367 9.8e-119 431.4 510 52.4
MBI06_g20299_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 1.6e-116 424.1 612 46.9
CAN.G804.4 Capsicum annuum HOM05D003724 ORTHO05D004367 1.2e-111 407.9 316 69.3
PSO339G0549 Papaver somniferum HOM05D003724 ORTHO05D004367 9.8e-111 404.8 536 48.7
BcaB03g15202 Brassica carinata HOM05D003724 ORTHO05D004367 8.3e-110 401.7 315 67.0
C06p38720 Brassica napus HOM05D003724 ORTHO05D004367 4.9e-102 375.9 550 45.6
FAN24G3534 Fragaria x ananassa HOM05D003724 ORTHO05D004367 1.4e-101 374.4 499 48.1
unitig_8.g3138 Utricularia gibba HOM05D003724 ORTHO05D004367 5.6e-90 335.9 501 43.9
AagrBONN_evm.TU.Sc2ySwM_368.2626 Anthoceros agrestis HOM05D003724 ORTHO05D004367 2.3e-83 313.9 619 37.8
COL.COLO4_20398 Corchorus olitorius HOM05D003724 ORTHO05D004367 6.6e-83 312.4 396 50.8
PSO339G0625 Papaver somniferum HOM05D003724 ORTHO05D004367 7.3e-74 282.3 338 50.9
PSO170G4962 Papaver somniferum HOM05D003724 ORTHO05D004367 4.8e-73 279.6 323 51.7
CARHR058050 Cardamine hirsuta HOM05D003724 ORTHO05D004367 3.4e-71 273.5 258 58.9
MBI06_g32743_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 3.4e-71 273.5 318 54.7
SHI17968 Sapria himalayana HOM05D003724 ORTHO05D004367 4.4e-71 273.1 212 67.0
FAN12G2603 Fragaria x ananassa HOM05D003724 ORTHO05D004367 7.6e-71 272.3 243 65.0
DCAR_026466 Daucus carota HOM05D003724 ORTHO05D004367 8.7e-67 258.8 176 76.1
CBR_g17956 Chara braunii HOM05D003724 ORTHO05D004367 1.4e-64 251.5 225 58.2
Mapoly0003s0194 Marchantia polymorpha HOM05D003724 ORTHO05D004367 1.4e-64 251.5 460 39.8
AL1G56910 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 7.6e-63 245.7 340 49.4
SMO116G0148 Selaginella moellendorffii HOM05D003724 ORTHO05D004367 4.3e-58 229.9 223 53.4
AT4G32200 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 3.4e-55 220.3 323 48.6
Solyc05g015370.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 1.7e-46 191.4 221 56.1
FAN12G4010 Fragaria x ananassa HOM05D003724 ORTHO05D004367 4.2e-45 186.8 254 46.9
FvH4_4g23791 Fragaria vesca HOM05D003724 ORTHO05D004367 5.5e-45 186.4 257 46.3
Os12g0606600 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 4.8e-41 173.3 427 33.3
SHI17969 Sapria himalayana HOM05D003724 ORTHO05D004367 1.5e-39 168.3 239 44.4
CAN.G804.3 Capsicum annuum HOM05D003724 ORTHO05D004367 2.6e-39 167.5 235 46.8
Pp3c5_4780 Physcomitrium patens HOM05D003724 ORTHO05D004367 3.8e-38 163.7 328 36.6
COL.COLO4_20397 Corchorus olitorius HOM05D003724 ORTHO05D004367 5.0e-38 163.3 120 77.5
Nitab4.5_0002119g0030 Nicotiana tabacum HOM05D003724 ORTHO05D004367 2.7e-36 157.5 228 42.5
PSO832G0175 Papaver somniferum HOM05D003724 ORTHO05D004367 2.0e-34 151.4 119 68.1
Phvul.001G261701 Phaseolus vulgaris HOM05D003724 ORTHO05D004367 1.7e-33 148.3 221 44.3
BcaB03g15203 Brassica carinata HOM05D003724 ORTHO05D004367 8.2e-33 146.0 244 45.1
FvH4_2g22740 Fragaria vesca HOM05D003724 ORTHO05D004367 5.9e-31 139.8 248 41.5
Sopen05g010640 Solanum pennellii HOM05D003724 ORTHO05D004367 2.9e-30 137.5 86 82.6
PSO782G0388 Papaver somniferum HOM05D003724 ORTHO05D004367 3.2e-29 134.0 165 47.9
Nitab4.5_0000767g0030 Nicotiana tabacum HOM05D003724 ORTHO05D004367 5.5e-29 133.3 184 45.1
Cre10.g452550 Chlamydomonas reinhardtii HOM05D003724 ORTHO05D004367 9.4e-29 132.5 270 36.7
Solyc05g015360.2 Solanum lycopersicum HOM05D003724 ORTHO05D004367 9.7e-26 122.5 79 79.7
Lsat_1_v5_gn_3_110541 Lactuca sativa HOM05D003724 ORTHO05D004367 8.2e-25 119.4 113 55.8
vmacro18929 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 1.1e-24 119.0 134 50.7
Hma1.2p1_0200F.1_g085970 Hydrangea macrophylla HOM05D003724 ORTHO05D004367 5.3e-24 116.7 292 32.5
SHI17966 Sapria himalayana HOM05D003724 ORTHO05D004367 3.5e-23 114.0 77 75.3
FAN07G2055 Fragaria x ananassa HOM05D003724 ORTHO05D004367 3.8e-22 110.5 213 40.4
Hma1.2p1_0053F.1_g030850 Hydrangea macrophylla HOM05D003724 ORTHO05D004367 4.7e-20 103.6 76 71.1
PSO063G4593 Papaver somniferum HOM05D003724 ORTHO05D004367 8.8e-19 99.4 77 64.9
PSO170G3909 Papaver somniferum HOM05D003724 ORTHO05D004367 2.0e-18 98.2 80 62.5
RcHm_v2.0_Chr4g0430331 Rosa chinensis HOM05D003724 ORTHO05D004367 2.6e-18 97.8 66 75.8
FAN12G4031 Fragaria x ananassa HOM05D003724 ORTHO05D004367 3.3e-18 97.4 164 42.7
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 1.3e-17 95.5 260 32.7
GSVIVG01010478001 Vitis vinifera HOM05D003724 ORTHO05D004367 2.2e-17 94.7 62 80.6
Glyma.11G250351 Glycine max HOM05D003724 ORTHO05D004367 2.4e-16 91.3 61 78.7
CSS0010492 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 7.0e-16 89.7 155 43.2
TPR.G40282 Trifolium pratense HOM05D003724 ORTHO05D004367 5.5e-13 80.1 118 42.4
vmacro01061 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 1.2e-12 79.0 147 40.8
Os01g0165800 Oryza sativa ssp. japonica HOM05D020709 ORTHO05D004367 8.0e-12 76.3 114 37.7
Sopen05g010670 Solanum pennellii HOM05D003724 ORTHO05D004367 1.8e-11 75.1 61 65.6
PRCOL_00002813 Prasinoderma coloniale HOM05D003724 ORTHO05D004367 6.8e-11 73.2 242 28.9
Lj3g0010411 Lotus japonicus HOM05D003724 ORTHO05D004367 2.7e-07 61.2 104 35.6
Solyc05g015380.2 Solanum lycopersicum HOM05D003724 ORTHO05D004367 7.7e-07 59.7 163 33.7
DCAR_028604 Daucus carota HOM05D000366 ORTHO05D000437 1.3e-06 58.9 63 50.8
vmacro05008 Vaccinium macrocarpon HOM05D000208 ORTHO05D426771 8.5e-06 56.2 64 50.0


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