Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10020429m.g Citrus clementina HOM05D005745 ORTHO05D006857 6.9e-237 823.5 404 100.0
Manes.01G259400 Manihot esculenta HOM05D005745 ORTHO05D006857 1.4e-149 533.5 418 64.8
Sabra14G0059300 Salix brachista HOM05D005745 ORTHO05D006857 4.6e-148 528.5 412 65.5
GSVIVG01026870001 Vitis vinifera HOM05D005745 ORTHO05D006857 6.6e-147 524.6 433 64.9
QL08p049437 Quercus lobata HOM05D005745 ORTHO05D006857 5.6e-146 521.5 405 67.7
Hma1.2p1_0001F.1_g001520 Hydrangea macrophylla HOM05D005745 ORTHO05D006857 2.3e-144 516.2 407 65.4
Cpa.g.sc18.234 Carica papaya HOM05D005745 ORTHO05D006857 1.7e-142 510.0 403 65.5
Actinidia20926 Actinidia chinensis HOM05D005745 ORTHO05D006857 3.7e-142 508.8 408 64.0
Actinidia10034 Actinidia chinensis HOM05D005745 ORTHO05D006857 2.4e-141 506.1 407 65.4
Nn6g33496 Nelumbo nucifera HOM05D005745 ORTHO05D006857 7.1e-141 504.6 408 64.7
TWI23G0914 Tripterygium wilfordii HOM05D005745 ORTHO05D006857 1.2e-140 503.8 438 62.1
Gohir.A12G105400 Gossypium hirsutum HOM05D005745 ORTHO05D006857 7.8e-140 501.1 405 63.2
TAR367G0002 Trochodendron aralioides HOM05D005745 ORTHO05D006857 1.3e-139 500.4 408 64.5
Dinv43791 Davidia involucrata HOM05D005745 ORTHO05D006857 1.7e-139 500.0 407 63.4
Gohir.D12G109300 Gossypium hirsutum HOM05D005745 ORTHO05D006857 1.7e-139 500.0 405 63.0
CSS0024424 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 3.0e-139 499.2 406 62.6
CSS0038489 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 3.9e-139 498.8 406 62.8
Gorai.008G118400 Gossypium raimondii HOM05D005745 ORTHO05D006857 1.5e-138 496.9 405 63.5
DCAR_015932 Daucus carota HOM05D005745 ORTHO05D006857 5.6e-138 495.0 401 63.8
CiPaw.02G029400 Carya illinoinensis HOM05D005745 ORTHO05D006857 2.1e-137 493.0 404 64.1
VMungo0331G1900 Vigna mungo HOM05D005745 ORTHO05D006857 1.1e-136 490.7 406 63.8
CANSAT56G0536 Cannabis sativa HOM05D005745 ORTHO05D006857 3.1e-136 489.2 414 63.8
Cfa003949 Carpinus fangiana HOM05D000683 ORTHO05D000507 3.1e-136 489.2 384 67.2
MD01G1055100 Malus domestica HOM05D005745 ORTHO05D006857 2.0e-135 486.5 404 62.9
FAN10G4182 Fragaria x ananassa HOM05D005745 ORTHO05D006857 4.4e-135 485.3 406 60.8
Lj3g0021692 Lotus japonicus HOM05D005745 ORTHO05D006857 9.9e-135 484.2 408 62.7
Haze_15472 Corylus avellana HOM05D005745 ORTHO05D006857 2.2e-134 483.0 434 61.3
FAN06G1549 Fragaria x ananassa HOM05D005745 ORTHO05D006857 9.2e-133 477.6 405 60.5
Lsat_1_v5_gn_7_5060 Lactuca sativa HOM05D005745 ORTHO05D006857 1.6e-132 476.9 396 64.1
Medtr8g031440 Medicago truncatula HOM05D005745 ORTHO05D006857 2.1e-132 476.5 407 61.2
vmacro13297 Vaccinium macrocarpon HOM05D005745 ORTHO05D006857 6.0e-132 474.9 405 62.0
Rhsim07G0017300 Rhododendron simsii HOM05D000683 ORTHO05D000507 1.7e-131 473.4 406 63.1
PSO782G5186 Papaver somniferum HOM05D005745 ORTHO05D006857 3.0e-131 472.6 405 60.7
Lalb_Chr04g0256771 Lupinus albus HOM05D005745 ORTHO05D006857 5.6e-130 468.4 409 61.1
PSO478G4474 Papaver somniferum HOM05D005745 ORTHO05D006857 5.6e-130 468.4 405 60.0
Sopen05g028140 Solanum pennellii HOM05D005745 ORTHO05D006857 2.4e-128 463.0 405 60.2
Solyc05g048810.4 Solanum lycopersicum HOM05D005745 ORTHO05D006857 9.0e-128 461.1 405 60.2
PGR042G0923 Punica granatum HOM05D005745 ORTHO05D006857 2.0e-127 459.9 406 60.6
A10p00280 Brassica napus HOM05D005745 ORTHO05D006857 5.8e-127 458.4 407 59.2
Potri.014G081400 Populus trichocarpa HOM05D005745 ORTHO05D006857 5.8e-127 458.4 352 66.5
CARHR000560 Cardamine hirsuta HOM05D005745 ORTHO05D006857 1.7e-126 456.8 410 58.5
CiPaw.02G029100 Carya illinoinensis HOM05D005745 ORTHO05D006857 2.9e-126 456.1 404 60.9
CsaV3_6G000430 Cucumis sativus L. HOM05D005745 ORTHO05D006857 2.9e-126 456.1 408 59.3
SGA_v2.0_scaffold277G46666 Striga asiatica HOM05D005745 ORTHO05D006857 2.9e-126 456.1 401 60.1
arahy.Tifrunner.gnm1.ann1.5YG8M2 Arachis hypogaea HOM05D005745 ORTHO05D006857 4.9e-126 455.3 404 59.9
ECA236G3051 Erigeron canadensis HOM05D005745 ORTHO05D006857 4.9e-126 455.3 398 61.1
EL10Ac1g00543 Beta vulgaris HOM05D005745 ORTHO05D006857 8.4e-126 454.5 396 60.4
Oeu056358.1 Olea europaea HOM05D005745 ORTHO05D006857 8.4e-126 454.5 378 63.2
PGSC0003DMG400021653 Solanum tuberosum HOM05D005745 ORTHO05D006857 1.4e-125 453.8 405 59.3
arahy.Tifrunner.gnm1.ann1.JLYP5G Arachis hypogaea HOM05D005745 ORTHO05D006857 1.9e-125 453.4 406 59.6
Aa31LG1G11130 Aethionema arabicum HOM05D005745 ORTHO05D006857 9.3e-125 451.1 433 57.3
BcaB03g13612 Brassica carinata HOM05D005745 ORTHO05D006857 2.1e-124 449.9 402 59.0
Cc02_g37770 Coffea canephora HOM05D005745 ORTHO05D006857 2.1e-124 449.9 412 58.0
Lj7C516G5 Lonicera japonica HOM05D005745 ORTHO05D006857 3.5e-124 449.1 349 66.8
MSTRG.17255 Avicennia marina HOM05D005745 ORTHO05D006857 4.6e-124 448.7 405 56.8
Eucgr.E00173 Eucalyptus grandis HOM05D005745 ORTHO05D006857 7.8e-124 448.0 412 57.5
Sc26g0000960 Simmondsia chinensis HOM05D005745 ORTHO05D006857 7.8e-124 448.0 408 58.1
Carub.0001s0045 Capsella rubella HOM05D005745 ORTHO05D006857 1.0e-123 447.6 402 59.0
AL1G10580 Arabidopsis lyrata HOM05D005745 ORTHO05D006857 1.3e-123 447.2 410 57.8
Aqoxy7G00357 Aquilegia oxysepala HOM05D005745 ORTHO05D006857 1.1e-122 444.1 409 57.2
Eucgr.E00169 Eucalyptus grandis HOM05D005745 ORTHO05D006857 1.1e-122 444.1 412 57.3
Lalb_Chr10g0097191 Lupinus albus HOM05D005745 ORTHO05D006857 1.5e-122 443.7 410 58.3
Sp1g00540 Schrenkiella parvula HOM05D005745 ORTHO05D006857 1.5e-122 443.7 404 58.4
Thhalv10007725m.g Eutrema salsugineum HOM05D005745 ORTHO05D006857 2.5e-122 443.0 409 58.4
Nitab4.5_0007346g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 7.3e-122 441.4 417 56.1
CAN.G1535.1 Capsicum annuum HOM05D005745 ORTHO05D006857 1.3e-121 440.7 405 57.0
BolC5t28819H Brassica oleracea HOM05D005745 ORTHO05D006857 1.6e-121 440.3 419 57.3
Duzib138G1514 Durio zibethinus HOM05D005745 ORTHO05D006857 1.6e-121 440.3 351 67.2
BraA10t42305Z Brassica rapa HOM05D005745 ORTHO05D006857 6.2e-121 438.3 428 56.1
AUR62033347 Chenopodium quinoa HOM05D005745 ORTHO05D006857 8.1e-121 438.0 395 58.0
AUR62033312 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.1e-120 437.6 395 58.0
C05p00290 Brassica napus HOM05D005745 ORTHO05D006857 1.8e-120 436.8 428 55.4
THA.LOC104817020 Tarenaya hassleriana HOM05D005745 ORTHO05D006857 1.7e-118 430.3 384 59.6
Hund27291 Selenicereus undatus HOM05D005745 ORTHO05D006857 2.9e-118 429.5 418 55.3
HanXRQChr04g0121611 Helianthus annuus HOM05D005745 ORTHO05D006857 4.9e-118 428.7 342 66.7
Peaxi162Scf00191g01322 Petunia axillaris HOM05D005745 ORTHO05D006857 1.1e-117 427.6 403 57.3
AT1G01760 Arabidopsis thaliana HOM05D005745 ORTHO05D006857 3.2e-117 426.0 415 56.9
ClCG06G003860 Citrullus lanatus HOM05D005745 ORTHO05D006857 1.2e-116 424.1 380 60.0
Ca_23656_v3 Cicer arietinum L. HOM05D005745 ORTHO05D006857 2.1e-116 423.3 369 61.0
Gohir.A12G105450 Gossypium hirsutum HOM05D005745 ORTHO05D006857 3.1e-112 409.5 342 61.4
Sed0009525 Sechium edule HOM05D005745 ORTHO05D006857 8.4e-110 401.4 353 60.6
AUR62004330 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.4e-109 400.6 401 54.6
CiPaw.02G029200 Carya illinoinensis HOM05D005745 ORTHO05D006857 3.5e-108 396.0 353 60.6
MBI17_g21972_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 3.5e-108 396.0 395 54.7
FAN03G1898 Fragaria x ananassa HOM05D005745 ORTHO05D006857 7.9e-108 394.8 406 52.5
Prupe.2G164800 Prunus persica HOM05D005745 ORTHO05D006857 2.4e-104 383.3 323 64.1
Ah.05g176680 Amaranthus hybridus HOM05D005745 ORTHO05D006857 3.4e-103 379.4 396 52.0
RcHm_v2.0_Chr1g0354081 Rosa chinensis HOM05D005745 ORTHO05D006857 6.5e-102 375.2 428 51.2
Nitab4.5_0002262g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 1.9e-98 363.6 394 51.5
MBI18_g01486_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 9.0e-96 354.8 382 52.9
FvH4_7g13861 Fragaria vesca HOM05D005745 ORTHO05D006857 1.2e-95 354.4 326 57.1
HPP92_001499 Vanilla planifolia HOM05D005745 ORTHO05D006857 6.5e-94 348.6 374 51.3
Glyma.07G073300 Glycine max HOM05D005745 ORTHO05D006857 5.5e-93 345.5 309 61.5
Zm00001eb067600 Zea mays HOM05D005745 ORTHO05D006857 1.3e-89 334.3 398 47.5
Phvul.010G096200 Phaseolus vulgaris HOM05D005745 ORTHO05D006857 4.8e-89 332.4 269 64.7
Atru.BG.56.p Acer truncatum HOM05D005745 ORTHO05D006857 3.1e-88 329.7 340 55.6
Psat4g154320 Pisum sativum HOM05D005745 ORTHO05D006857 4.2e-85 319.3 269 62.1
MELO3C021221.2 Cucumis melo HOM05D005745 ORTHO05D006857 5.5e-85 318.9 379 49.1
TPR.G39633 Trifolium pratense HOM05D005745 ORTHO05D006857 6.7e-83 312.0 216 70.4
Mapoly0023s0060 Marchantia polymorpha HOM05D005745 ORTHO05D006857 6.9e-80 302.0 503 39.4
CDE06G1611 Ceratophyllum demersum HOM05D005745 ORTHO05D006857 8.5e-78 295.0 407 44.5
FAN06G0933 Fragaria x ananassa HOM05D005745 ORTHO05D006857 9.4e-77 291.6 285 55.4
Pp3c4_14060 Physcomitrium patens HOM05D005745 ORTHO05D006857 8.0e-76 288.5 511 38.2
AagrBONN_evm.TU.Sc2ySwM_362.160 Anthoceros agrestis HOM05D005745 ORTHO05D006857 7.7e-71 271.9 439 38.3
Glyma.03G013600 Glycine max HOM05D005745 ORTHO05D006857 9.4e-69 265.0 269 55.8
Prupe.2G165000 Prunus persica HOM05D005745 ORTHO05D006857 4.7e-68 262.7 399 42.6
Os04g0683500 Oryza sativa ssp. japonica HOM05D005745 ORTHO05D006857 1.8e-67 260.8 308 46.4
SHI13462 Sapria himalayana HOM05D005745 ORTHO05D006857 4.5e-63 246.1 411 41.4
ATR0594G105 Amborella trichopoda HOM05D005745 ORTHO05D006857 7.7e-63 245.4 242 54.5
AUR62003100 Chenopodium quinoa HOM05D005745 ORTHO05D006857 2.9e-62 243.4 180 65.6
AUR62034353 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.9e-61 240.7 185 64.3
Thecc.01G362500 Theobroma cacao HOM05D005745 ORTHO05D006857 1.6e-60 237.7 245 56.7
MD07G1140200 Malus domestica HOM05D005745 ORTHO05D006857 1.0e-59 235.0 288 50.3
Zm00001eb420790 Zea mays HOM05D005745 ORTHO05D006857 4.8e-57 226.1 209 54.5
unitig_26.g9734 Utricularia gibba HOM05D005745 ORTHO05D006857 5.4e-56 222.6 339 41.6
Zm00001eb191880 Zea mays HOM05D009386 ORTHO05D006857 2.9e-46 190.3 185 54.1
TPR.G4413 Trifolium pratense HOM05D005745 ORTHO05D006857 3.3e-45 186.8 152 64.5
SMO266G0032 Selaginella moellendorffii HOM05D005745 ORTHO05D006857 5.6e-45 186.0 284 39.4
SEGI_32011 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 5.2e-43 179.5 186 53.2
Oeu056357.1 Olea europaea HOM05D005745 ORTHO05D006857 1.9e-40 171.0 151 60.3
Atru.chr5.475 Acer truncatum HOM05D005745 ORTHO05D006857 2.0e-39 167.5 93 86.0
Prupe.2G164500 Prunus persica HOM05D005745 ORTHO05D006857 9.5e-37 158.7 147 61.9
MCO02G004 Micromonas commoda HOM05D005745 ORTHO05D006857 4.7e-36 156.4 424 31.1
AUR62034238 Chenopodium quinoa HOM05D002177 ORTHO05D002257 3.7e-33 146.7 111 60.4
AUR62019766 Chenopodium quinoa HOM05D005745 ORTHO05D006857 5.4e-32 142.9 108 60.2
PRCOL_00000230 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 2.1e-31 141.0 421 30.2
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 3.9e-30 136.7 817 23.1
SEGI_32349 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 4.3e-29 133.3 399 26.8
Glyma.03G013550 Glycine max HOM05D005745 ORTHO05D006857 5.6e-29 132.9 96 66.7
EL10Ac7g17708 Beta vulgaris HOM05D005745 ORTHO05D006857 8.1e-28 129.0 85 72.9
Zm00001eb442120 Zea mays HOM05D009386 ORTHO05D006857 4.0e-27 126.7 115 55.7
FAN01G0854 Fragaria x ananassa HOM05D005745 ORTHO05D006857 4.4e-26 123.2 153 47.1
Oeu056356.1 Olea europaea HOM05D005745 ORTHO05D006857 3.7e-25 120.2 81 72.8
COL.COLO4_12683 Corchorus olitorius HOM05D000683 ORTHO05D000507 3.5e-23 113.6 135 48.9
Cre14.g629283 Chlamydomonas reinhardtii HOM05D005745 ORTHO05D006857 1.2e-15 88.6 101 46.5
MCO15G493 Micromonas commoda HOM05D005745 ORTHO05D006857 2.7e-15 87.4 326 27.3
PRCOL_00001873 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 6.2e-12 76.3 259 27.8
MCO14G396 Micromonas commoda HOM05D005745 ORTHO05D006857 3.8e-09 67.0 116 32.8
MD07G1140100 Malus domestica HOM05D005745 ORTHO05D006857 1.6e-07 61.6 53 50.9
ATR0594G209 Amborella trichopoda HOM05D005745 ORTHO05D006857 1.3e-06 58.5 65 50.8


User provided reference genes

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