Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10013786m.g Citrus clementina HOM05D002653 ORTHO05D002623 2.3e-60 235.3 117 100.0
Atru.chr8.1040 Acer truncatum HOM05D002653 ORTHO05D002623 1.3e-34 149.8 101 75.2
Thecc.01G150000 Theobroma cacao HOM05D002653 ORTHO05D002623 2.9e-31 138.7 101 69.3
Gohir.D04G020301 Gossypium hirsutum HOM05D002653 ORTHO05D002623 8.6e-31 137.1 101 69.3
Gorai.012G024100 Gossypium raimondii HOM05D002653 ORTHO05D002623 8.6e-31 137.1 101 69.3
GSVIVG01019369001 Vitis vinifera HOM05D002653 ORTHO05D002623 8.6e-31 137.1 103 65.0
CiPaw.06G000300 Carya illinoinensis HOM05D002653 ORTHO05D002623 2.5e-30 135.6 100 68.0
TWI34G1636 Tripterygium wilfordii HOM05D002653 ORTHO05D002623 4.3e-30 134.8 101 62.4
Potri.001G455600 Populus trichocarpa HOM05D002653 ORTHO05D002623 5.6e-30 134.4 101 63.4
Duzib114G0204 Durio zibethinus HOM05D002653 ORTHO05D002623 9.5e-30 133.7 101 66.3
Prupe.3G028500 Prunus persica HOM05D002653 ORTHO05D002623 9.5e-30 133.7 101 65.3
AT5G24740 Arabidopsis thaliana HOM05D002653 ORTHO05D002623 2.8e-29 132.1 102 65.7
A06p35550 Brassica napus HOM05D002653 ORTHO05D002623 2.8e-29 132.1 102 62.7
BraA06t26480Z Brassica rapa HOM05D002653 ORTHO05D002623 2.8e-29 132.1 102 62.7
BcaNung01253 Brassica carinata HOM05D002653 ORTHO05D002623 3.6e-29 131.7 102 62.7
C07p42990 Brassica napus HOM05D002653 ORTHO05D002623 3.6e-29 131.7 102 62.7
BolC7t44828H Brassica oleracea HOM05D002653 ORTHO05D002623 3.6e-29 131.7 102 62.7
Gohir.A05G394600 Gossypium hirsutum HOM05D002653 ORTHO05D002623 3.6e-29 131.7 101 66.3
QL04p064992 Quercus lobata HOM05D002653 ORTHO05D002623 3.6e-29 131.7 101 66.3
THA.LOC104814962 Tarenaya hassleriana HOM05D002653 ORTHO05D002623 4.7e-29 131.3 101 64.4
TAR624G0800 Trochodendron aralioides HOM05D002653 ORTHO05D002623 4.7e-29 131.3 101 63.4
Dinv38369 Davidia involucrata HOM05D002653 ORTHO05D002623 6.1e-29 131.0 100 63.0
CSS0026519 Camellia sinensis var. sinensis HOM05D002653 ORTHO05D002623 8.0e-29 130.6 100 64.0
Hma1.2p1_1074F.1_g254380 Hydrangea macrophylla HOM05D002653 ORTHO05D002623 8.0e-29 130.6 100 62.0
Sabra16G0308200 Salix brachista HOM05D002653 ORTHO05D002623 8.0e-29 130.6 101 60.4
CSS0038262 Camellia sinensis var. sinensis HOM05D002653 ORTHO05D002623 1.0e-28 130.2 100 64.0
COL.COLO4_33574 Corchorus olitorius HOM05D002653 ORTHO05D002623 1.0e-28 130.2 101 66.3
PGR044G0026 Punica granatum HOM05D002653 ORTHO05D002623 1.4e-28 129.8 101 61.4
PSO063G3289 Papaver somniferum HOM05D002653 ORTHO05D002623 1.8e-28 129.4 101 58.4
DCAR_018920 Daucus carota HOM05D002653 ORTHO05D002623 3.0e-28 128.6 109 59.6
FvH4_6g36300 Fragaria vesca HOM05D002653 ORTHO05D002623 3.0e-28 128.6 101 61.4
FAN14G0870 Fragaria x ananassa HOM05D002653 ORTHO05D002623 3.0e-28 128.6 101 61.4
FAN14G5588 Fragaria x ananassa HOM05D002653 ORTHO05D002623 3.0e-28 128.6 101 61.4
FAN02G0462 Fragaria x ananassa HOM05D002653 ORTHO05D002623 4.0e-28 128.3 101 60.4
FAN09G4442 Fragaria x ananassa HOM05D002653 ORTHO05D002623 4.0e-28 128.3 101 60.4
EL10Ac1g01415 Beta vulgaris HOM05D002653 ORTHO05D002623 6.8e-28 127.5 100 62.0
vmacro03485 Vaccinium macrocarpon HOM05D002653 ORTHO05D002623 6.8e-28 127.5 100 64.0
Lalb_Chr01g0009381 Lupinus albus HOM05D002653 ORTHO05D002623 8.9e-28 127.1 100 63.0
PSO782G1285 Papaver somniferum HOM05D002653 ORTHO05D002623 1.2e-27 126.7 101 57.4
AL6G36330 Arabidopsis lyrata HOM05D002653 ORTHO05D002623 1.5e-27 126.3 100 62.0
LjContig00141g0016117 Lotus japonicus HOM05D002653 ORTHO05D002623 2.0e-27 125.9 100 61.0
Carub.0006s2259 Capsella rubella HOM05D002653 ORTHO05D002623 2.6e-27 125.6 100 62.0
Lj4g0020533 Lotus japonicus HOM05D002653 ORTHO05D002623 2.6e-27 125.6 99 61.6
Cfa016258 Carpinus fangiana HOM05D002653 ORTHO05D002623 5.8e-27 124.4 100 64.0
Rhsim13G0127300 Rhododendron simsii HOM05D002653 ORTHO05D002623 9.8e-27 123.6 101 60.4
MD17G1156800 Malus domestica HOM05D002653 ORTHO05D002623 2.9e-26 122.1 101 60.4
Medtr2g007250 Medicago truncatula HOM05D002653 ORTHO05D002623 2.9e-26 122.1 100 60.0
Nn7g37406 Nelumbo nucifera HOM05D002653 ORTHO05D002623 2.9e-26 122.1 101 57.4
ClCG03G010410 Citrullus lanatus HOM05D002653 ORTHO05D002623 6.4e-26 120.9 100 61.0
Lsat_1_v5_gn_6_56501 Lactuca sativa HOM05D002653 ORTHO05D002623 6.4e-26 120.9 100 59.0
Manes.11G165700 Manihot esculenta HOM05D002653 ORTHO05D002623 6.4e-26 120.9 100 61.0
Lsat_1_v5_gn_8_5081 Lactuca sativa HOM05D002653 ORTHO05D002623 1.1e-25 120.2 100 60.0
TPR.G8155 Trifolium pratense HOM05D002653 ORTHO05D002623 1.1e-25 120.2 101 57.4
MELO3C010033.2 Cucumis melo HOM05D002653 ORTHO05D002623 1.4e-25 119.8 100 61.0
HanXRQChr07g0186761 Helianthus annuus HOM05D002653 ORTHO05D002623 1.4e-25 119.8 100 59.0
Manes.09G076300 Manihot esculenta HOM05D002653 ORTHO05D002623 1.9e-25 119.4 100 60.0
Oeu013190.1 Olea europaea HOM05D002653 ORTHO05D002623 2.4e-25 119.0 100 57.0
Cc11_g00300 Coffea canephora HOM05D002653 ORTHO05D002623 5.4e-25 117.9 100 58.0
ECA233G1976 Erigeron canadensis HOM05D002653 ORTHO05D002623 5.4e-25 117.9 102 56.9
Sc15g0007450 Simmondsia chinensis HOM05D002653 ORTHO05D002623 5.4e-25 117.9 98 58.2
Glyma.13G174600 Glycine max HOM05D002653 ORTHO05D002623 9.2e-25 117.1 100 59.0
Solyc11g045160.3 Solanum lycopersicum HOM05D002653 ORTHO05D002623 9.2e-25 117.1 100 55.0
Sopen11g020620 Solanum pennellii HOM05D002653 ORTHO05D002623 9.2e-25 117.1 100 55.0
Psat0s3513g0080 Pisum sativum HOM05D002653 ORTHO05D002623 1.6e-24 116.3 100 58.0
AUR62013467 Chenopodium quinoa HOM05D002653 ORTHO05D002623 2.0e-24 115.9 100 56.0
Migut.L00787 Erythranthe guttata HOM05D002653 ORTHO05D002623 2.0e-24 115.9 100 56.0
Migut.L00840 Erythranthe guttata HOM05D002653 ORTHO05D002623 2.0e-24 115.9 100 56.0
Phvul.002G234304 Phaseolus vulgaris HOM05D002653 ORTHO05D002623 2.0e-24 115.9 100 59.0
Phvul.002G234312 Phaseolus vulgaris HOM05D002653 ORTHO05D002623 2.0e-24 115.9 100 59.0
unitig_8.g3108 Utricularia gibba HOM05D002653 ORTHO05D002623 2.7e-24 115.5 101 56.4
Peaxi162Scf00126g00051 Petunia axillaris HOM05D002653 ORTHO05D002623 3.5e-24 115.2 100 55.0
MSTRG.8096 Avicennia marina HOM05D002653 ORTHO05D002623 4.6e-24 114.8 100 54.0
Ca_14758_v3 Cicer arietinum L. HOM05D002653 ORTHO05D002623 6.0e-24 114.4 98 57.1
arahy.Tifrunner.gnm1.ann1.GW217K Arachis hypogaea HOM05D002653 ORTHO05D002623 1.3e-23 113.2 93 61.3
SGA_v2.0_scaffold131G34416 Striga asiatica HOM05D002653 ORTHO05D002623 1.3e-23 113.2 101 56.4
Aqoxy2G01525 Aquilegia oxysepala HOM05D002653 ORTHO05D002623 2.3e-23 112.5 100 56.0
CANSAT01G2419 Cannabis sativa HOM05D002653 ORTHO05D002623 3.9e-23 111.7 101 54.5
CAN.G690.1 Capsicum annuum HOM05D002653 ORTHO05D002623 6.6e-23 110.9 100 52.0
SalBow1G2769 Salvia bowleyana HOM05D002653 ORTHO05D002623 6.6e-23 110.9 100 54.0
SalBow1G3632 Salvia bowleyana HOM05D002653 ORTHO05D002623 6.6e-23 110.9 100 54.0
Zm00001eb260910 Zea mays HOM05D002653 ORTHO05D002623 1.2e-21 106.7 99 56.6
ATR1155G033 Amborella trichopoda HOM05D002653 ORTHO05D002623 1.6e-21 106.3 117 45.3
Os08g0116700 Oryza sativa ssp. japonica HOM05D002653 ORTHO05D002623 2.8e-21 105.5 99 52.5
Thhalv10003500m.g Eutrema salsugineum HOM05D002653 ORTHO05D002623 3.6e-21 105.1 83 63.9
CDE12G0934 Ceratophyllum demersum HOM05D002653 ORTHO05D002623 8.0e-21 104.0 101 50.5
Lj4A824T16 Lonicera japonica HOM05D002653 ORTHO05D002623 2.0e-19 99.4 76 65.8
AUR62026805 Chenopodium quinoa HOM05D002653 ORTHO05D002623 2.2e-18 95.9 85 55.3
Aa31LG11G3960 Aethionema arabicum HOM05D002653 ORTHO05D002623 2.9e-18 95.5 84 57.1
HPP92_001360 Vanilla planifolia HOM05D002653 ORTHO05D002623 2.4e-17 92.4 99 47.5
Ah.05g169290 Amaranthus hybridus HOM05D002653 ORTHO05D002623 2.1e-16 89.4 123 45.5
SEGI_37635 Sequoiadendron giganteum HOM05D002653 ORTHO05D002623 2.1e-13 79.3 101 40.6
SMO353G0260 Selaginella moellendorffii HOM05D002653 ORTHO05D002623 1.8e-12 76.3 102 39.2
RcHm_v2.0_Chr2g0148301 Rosa chinensis HOM05D002653 ORTHO05D002623 8.9e-12 73.9 64 57.8
CsaV3_1G044330 Cucumis sativus L. HOM05D002653 ORTHO05D002623 9.9e-11 70.5 41 75.6
Lsat_1_v5_gn_7_38641 Lactuca sativa HOM05D002653 ORTHO05D002623 7.1e-09 64.3 50 66.0
Lsat_1_v5_gn_4_86300 Lactuca sativa HOM05D002653 ORTHO05D002623 6.0e-08 61.2 50 64.0
Psat6g120600 Pisum sativum HOM05D001580 ORTHO05D002623 1.7e-07 59.7 46 63.0
Pp3c15_25690 Physcomitrium patens HOM05D002653 ORTHO05D002623 3.0e-07 58.9 100 38.0
VMungo0251G2462 Vigna mungo HOM05D002653 ORTHO05D002623 5.1e-07 58.2 34 73.5
VMungo0251G2657 Vigna mungo HOM05D002653 ORTHO05D002623 6.6e-07 57.8 49 57.1
Sed0020559 Sechium edule HOM05D002653 ORTHO05D002623 1.1e-06 57.0 50 56.0
RcHm_v2.0_Chr2g0148311 Rosa chinensis HOM05D002653 ORTHO05D002623 3.3e-06 55.5 31 71.0
Mapoly0009s0011 Marchantia polymorpha HOM05D002653 ORTHO05D002623 5.6e-06 54.7 79 39.2


User provided reference genes

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