Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ciclev10009072m.g Citrus clementina HOM05D006943 ORTHO05D008565 3.2e-159 565.1 293 100.0
Atru.chr7.2692 Acer truncatum HOM05D006943 ORTHO05D008565 7.0e-74 281.6 294 56.8
Haze_21789 Corylus avellana HOM05D006943 ORTHO05D008565 4.0e-61 239.2 302 47.7
QL12p025818 Quercus lobata HOM05D006943 ORTHO05D008565 8.9e-61 238.0 327 48.0
Cfa013306 Carpinus fangiana HOM05D006943 ORTHO05D008565 7.6e-60 235.0 313 46.6
Dinv37491 Davidia involucrata HOM05D006943 ORTHO05D008565 2.5e-55 219.9 302 49.7
TWI63G1698 Tripterygium wilfordii HOM05D006943 ORTHO05D008565 1.5e-52 210.7 287 44.6
ClCG05G026350 Citrullus lanatus HOM05D006943 ORTHO05D008565 1.2e-49 201.1 298 43.0
GSVIVG01035569001 Vitis vinifera HOM05D006943 ORTHO05D008565 1.7e-48 197.2 296 44.3
Manes.16G137900 Manihot esculenta HOM05D006943 ORTHO05D008565 2.3e-48 196.8 313 43.8
CsaV3_3G047250 Cucumis sativus L. HOM05D006943 ORTHO05D008565 3.0e-48 196.4 316 43.0
MELO3C003604.2 Cucumis melo HOM05D006943 ORTHO05D008565 5.6e-47 192.2 306 42.5
CANSAT35G2034 Cannabis sativa HOM05D006943 ORTHO05D008565 6.2e-46 188.7 319 42.0
Cpa.g.sc148.5 Carica papaya HOM05D006943 ORTHO05D008565 6.2e-46 188.7 304 42.8
Duzib168G0749 Durio zibethinus HOM05D006943 ORTHO05D008565 1.8e-45 187.2 307 40.1
Sed0013911 Sechium edule HOM05D006943 ORTHO05D008565 1.8e-45 187.2 299 40.1
THA.LOC104803585 Tarenaya hassleriana HOM05D006943 ORTHO05D008565 1.2e-44 184.5 298 41.6
AT4G31270 Arabidopsis thaliana HOM05D006943 ORTHO05D008565 4.5e-44 182.6 302 39.7
COL.COLO4_18631 Corchorus olitorius HOM05D006943 ORTHO05D008565 4.5e-44 182.6 300 39.7
Prupe.1G456500 Prunus persica HOM05D006943 ORTHO05D008565 5.8e-44 182.2 323 42.1
TAR636G0756 Trochodendron aralioides HOM05D006943 ORTHO05D008565 5.8e-44 182.2 295 42.0
A08p18750 Brassica napus HOM05D006943 ORTHO05D008565 9.9e-44 181.4 314 43.3
CARHR239150 Cardamine hirsuta HOM05D006943 ORTHO05D008565 3.8e-43 179.5 292 39.7
Thhalv10025787m.g Eutrema salsugineum HOM05D006943 ORTHO05D008565 6.4e-43 178.7 315 41.3
Lalb_Chr22g0361191 Lupinus albus HOM05D006943 ORTHO05D008565 8.4e-43 178.3 335 37.0
Actinidia25739 Actinidia chinensis HOM05D006943 ORTHO05D008565 3.2e-42 176.4 308 41.9
BcaC01g01105 Brassica carinata HOM05D006943 ORTHO05D008565 3.2e-42 176.4 300 43.3
C03p88130 Brassica napus HOM05D006943 ORTHO05D008565 3.2e-42 176.4 300 43.3
Medtr1g009220 Medicago truncatula HOM05D006943 ORTHO05D008565 9.3e-42 174.9 326 37.7
VMungo0647G1044 Vigna mungo HOM05D006943 ORTHO05D008565 1.6e-41 174.1 319 39.5
AL7G20800 Arabidopsis lyrata HOM05D006943 ORTHO05D008565 4.6e-41 172.6 296 41.6
Carub.0007s0929 Capsella rubella HOM05D006943 ORTHO05D008565 6.0e-41 172.2 301 39.9
BolC3t21121H Brassica oleracea HOM05D006943 ORTHO05D008565 1.0e-40 171.4 303 42.9
BraA08t33836Z Brassica rapa HOM05D006943 ORTHO05D008565 1.8e-40 170.6 305 42.0
Phvul.001G077900 Phaseolus vulgaris HOM05D006943 ORTHO05D008565 1.5e-39 167.5 330 37.6
Ca_01518_v3 Cicer arietinum L. HOM05D006943 ORTHO05D008565 1.9e-39 167.2 323 35.0
BcaB03g12686 Brassica carinata HOM05D006943 ORTHO05D008565 4.3e-39 166.0 305 42.0
Cc10_g14290 Coffea canephora HOM05D006943 ORTHO05D008565 4.3e-39 166.0 291 37.5
Aa31LG2G19090 Aethionema arabicum HOM05D006943 ORTHO05D008565 7.4e-39 165.2 296 40.9
Sc06g0001270 Simmondsia chinensis HOM05D006943 ORTHO05D008565 1.6e-38 164.1 308 35.7
Eucgr.C02135 Eucalyptus grandis HOM05D006943 ORTHO05D008565 2.1e-38 163.7 391 34.8
Glyma.14G138000 Glycine max HOM05D006943 ORTHO05D008565 1.8e-37 160.6 319 38.2
Glyma.17G194700 Glycine max HOM05D006943 ORTHO05D008565 3.1e-37 159.8 321 37.4
Dinv38807 Davidia involucrata HOM05D006943 ORTHO05D008565 6.9e-37 158.7 166 55.4
Psat6g033160 Pisum sativum HOM05D006943 ORTHO05D008565 9.0e-37 158.3 324 37.7
Lj5g0018295 Lotus japonicus HOM05D006943 ORTHO05D008565 5.8e-36 155.6 334 35.6
ECA246G0365 Erigeron canadensis HOM05D006943 ORTHO05D008565 7.6e-36 155.2 280 40.4
Nn5g27072 Nelumbo nucifera HOM05D006943 ORTHO05D008565 7.6e-36 155.2 292 35.3
AUR62020649 Chenopodium quinoa HOM05D006943 ORTHO05D008565 8.4e-35 151.8 300 36.7
MD08G1124900 Malus domestica HOM05D006943 ORTHO05D008565 1.1e-34 151.4 311 37.9
SalBow8G0710 Salvia bowleyana HOM05D006943 ORTHO05D008565 1.1e-34 151.4 320 35.3
HanXRQChr03g0081291 Helianthus annuus HOM05D006943 ORTHO05D008565 1.4e-34 151.0 290 37.9
AUR62038724 Chenopodium quinoa HOM05D006943 ORTHO05D008565 1.9e-34 150.6 300 36.7
AUR62043827 Chenopodium quinoa HOM05D006943 ORTHO05D008565 1.9e-34 150.6 300 36.7
MD15G1104200 Malus domestica HOM05D006943 ORTHO05D008565 1.9e-34 150.6 312 35.9
Potri.006G279100 Populus trichocarpa HOM05D006943 ORTHO05D008565 2.5e-34 150.2 449 29.4
Sp7g29130 Schrenkiella parvula HOM05D006943 ORTHO05D008565 2.1e-33 147.1 214 45.3
Oeu008780.1 Olea europaea HOM05D006943 ORTHO05D008565 3.5e-33 146.4 319 35.1
EL10Ac2g03684 Beta vulgaris HOM05D006943 ORTHO05D008565 4.6e-33 146.0 299 38.1
Eucgr.L02411 Eucalyptus grandis HOM05D006943 ORTHO05D008565 6.0e-33 145.6 142 56.3
Lsat_1_v5_gn_3_68681 Lactuca sativa HOM05D006943 ORTHO05D008565 1.8e-32 144.1 289 39.4
PGSC0003DMG400029553 Solanum tuberosum HOM05D006943 ORTHO05D008565 1.1e-31 141.4 312 32.7
Peaxi162Scf00213g00939 Petunia axillaris HOM05D006943 ORTHO05D008565 1.5e-31 141.0 317 34.4
Sopen08g022790 Solanum pennellii HOM05D006943 ORTHO05D008565 1.5e-31 141.0 321 31.8
Ah.11g044140 Amaranthus hybridus HOM05D006943 ORTHO05D008565 1.9e-31 140.6 301 36.9
CAN.G480.10 Capsicum annuum HOM05D006943 ORTHO05D008565 2.5e-31 140.2 310 31.6
Migut.E01408 Erythranthe guttata HOM05D006943 ORTHO05D008565 2.5e-31 140.2 309 35.0
Migut.E01420 Erythranthe guttata HOM05D006943 ORTHO05D008565 2.5e-31 140.2 309 35.0
Potri.018G002801 Populus trichocarpa HOM05D006943 ORTHO05D008565 3.3e-31 139.8 421 30.2
arahy.Tifrunner.gnm1.ann1.HML22G Arachis hypogaea HOM05D006943 ORTHO05D008565 5.7e-31 139.0 369 32.2
Solyc08g069160.3 Solanum lycopersicum HOM05D006943 ORTHO05D008565 1.6e-30 137.5 321 31.5
arahy.Tifrunner.gnm1.ann1.X8DLDE Arachis hypogaea HOM05D006943 ORTHO05D008565 8.2e-30 135.2 369 31.7
Nitab4.5_0001942g0070 Nicotiana tabacum HOM05D006943 ORTHO05D008565 8.2e-30 135.2 324 32.1
Lsat_1_v5_gn_5_56401 Lactuca sativa HOM05D006943 ORTHO05D008565 3.1e-29 133.3 285 38.6
CSS0017346 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 5.3e-29 132.5 139 54.0
CSS0048200 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 5.3e-29 132.5 139 54.0
DCAR_004562 Daucus carota HOM05D006943 ORTHO05D008565 9.0e-29 131.7 286 32.9
FvH4_2g36510 Fragaria vesca HOM05D006943 ORTHO05D008565 9.0e-29 131.7 170 46.5
Nitab4.5_0005058g0010 Nicotiana tabacum HOM05D006943 ORTHO05D008565 1.2e-28 131.3 319 31.7
HanXRQChr17g0539241 Helianthus annuus HOM05D006943 ORTHO05D008565 2.6e-28 130.2 287 35.9
CSS0049214 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 3.4e-28 129.8 139 52.5
RcHm_v2.0_Chr6g0305361 Rosa chinensis HOM05D006943 ORTHO05D008565 4.5e-28 129.4 178 42.7
FAN27G2029 Fragaria x ananassa HOM05D006943 ORTHO05D008565 7.6e-28 128.6 170 44.7
TPR.G11968 Trifolium pratense HOM05D006943 ORTHO05D008565 2.9e-27 126.7 431 29.2
FAN15G2754 Fragaria x ananassa HOM05D006943 ORTHO05D008565 6.5e-27 125.6 488 26.6
FAN20G3130 Fragaria x ananassa HOM05D006943 ORTHO05D008565 6.5e-27 125.6 492 29.3
Aqoxy7G02511 Aquilegia oxysepala HOM05D006943 ORTHO05D008565 2.5e-26 123.6 297 29.6
MBI16_g00837_MAGBIO Magnolia biondii HOM05D006943 ORTHO05D008565 5.5e-26 122.5 306 33.0
Hund03260 Selenicereus undatus HOM05D006943 ORTHO05D008565 1.6e-25 120.9 143 47.6
ECA240G4190 Erigeron canadensis HOM05D006943 ORTHO05D008565 6.1e-25 119.0 283 34.3
CDE02G0425 Ceratophyllum demersum HOM05D006943 ORTHO05D008565 4.8e-22 109.4 298 28.2
Atru.chr6.219 Acer truncatum HOM05D006943 ORTHO05D008565 5.3e-21 105.9 57 86.0
HPP92_021992 Vanilla planifolia HOM05D006943 ORTHO05D008565 1.0e-19 101.7 298 29.2
ATR0626G281 Amborella trichopoda HOM05D006943 ORTHO05D008565 1.7e-19 100.9 299 26.8
MSTRG.13940 Avicennia marina HOM05D006943 ORTHO05D008565 1.4e-16 91.3 76 51.3
PSO063G4511 Papaver somniferum HOM05D006943 ORTHO05D008565 1.8e-16 90.9 181 31.5
PSO170G5679 Papaver somniferum HOM05D006943 ORTHO05D008565 3.9e-16 89.7 181 30.9
CSS0045137 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 6.7e-16 89.0 137 43.1
MSTRG.13929 Avicennia marina HOM05D006943 ORTHO05D008565 1.1e-15 88.2 74 51.4
Thecc.09G002300 Theobroma cacao HOM05D006943 ORTHO05D008565 6.3e-14 82.4 69 56.5
VMungo0720G0266 Vigna mungo HOM05D006943 ORTHO05D008565 2.6e-12 77.0 130 39.2
Actinidia03335 Actinidia chinensis HOM05D006943 ORTHO05D008565 3.8e-11 73.2 270 27.0
Os02g0174300 Oryza sativa ssp. japonica HOM05D006943 ORTHO05D008565 3.2e-10 70.1 306 24.8
Rhsim01G0256100 Rhododendron simsii HOM05D006943 ORTHO05D008565 2.1e-09 67.4 78 51.3
Zm00001eb233350 Zea mays HOM05D006943 ORTHO05D008565 2.1e-09 67.4 315 26.0
VMungo0331G1831 Vigna mungo HOM05D006943 ORTHO05D008565 1.4e-08 64.7 222 29.3
MSTRG.13927 Avicennia marina HOM05D006943 ORTHO05D008565 8.8e-08 62.0 74 47.3
MSTRG.13928 Avicennia marina HOM05D006943 ORTHO05D008565 8.8e-08 62.0 74 47.3
MSTRG.13939 Avicennia marina HOM05D006943 ORTHO05D008565 2.0e-07 60.8 74 45.9
MSTRG.13926 Avicennia marina HOM05D006943 ORTHO05D008565 9.7e-07 58.5 74 45.9
CSS0031863 Camellia sinensis var. sinensis HOM05D006943 ORTHO05D008565 2.8e-06 57.0 135 37.0
Pp3c15_4190 Physcomitrium patens HOM05D002537 ORTHO05D002751 6.3e-06 55.8 295 20.0
AagrBONN_evm.TU.Sc2ySwM_117.2665 Anthoceros agrestis HOM05D003725 ORTHO05D004294 8.2e-06 55.5 135 25.9


User provided reference genes

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