Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G057000 Carya illinoinensis HOM05D005848 ORTHO05D007532 1.2e-100 369.8 186 100.0
CiPaw.16G056600 Carya illinoinensis HOM05D005848 ORTHO05D007532 3.8e-73 278.5 197 76.1
Haze_17969 Corylus avellana HOM05D005848 ORTHO05D007532 9.1e-59 230.7 197 65.5
Prupe.1G379500 Prunus persica HOM05D005848 ORTHO05D007532 7.7e-58 227.6 196 63.3
Cfa018151 Carpinus fangiana HOM05D005848 ORTHO05D007532 7.2e-56 221.1 197 63.5
QL02p008596 Quercus lobata HOM05D005848 ORTHO05D007532 6.1e-55 218.0 197 61.4
MD08G1031900 Malus domestica HOM05D005848 ORTHO05D007532 1.0e-54 217.2 196 59.7
MD15G1027800 Malus domestica HOM05D005848 ORTHO05D007532 1.1e-53 213.8 196 59.2
Dinv36081 Davidia involucrata HOM05D005848 ORTHO05D007532 2.0e-53 213.0 192 59.4
TWI36G0400 Tripterygium wilfordii HOM05D005848 ORTHO05D007532 1.8e-51 206.5 196 58.7
MELO3C010940.2 Cucumis melo HOM05D005848 ORTHO05D007532 2.6e-50 202.6 196 57.1
RcHm_v2.0_Chr6g0301031 Rosa chinensis HOM05D005848 ORTHO05D007532 4.5e-50 201.8 196 57.7
CsaV3_2G028680 Cucumis sativus L. HOM05D005848 ORTHO05D007532 7.7e-50 201.1 196 57.1
Potri.002G260700 Populus trichocarpa HOM05D005848 ORTHO05D007532 2.2e-49 199.5 196 56.6
TWI56G0568 Tripterygium wilfordii HOM05D005848 ORTHO05D007532 3.8e-49 198.7 196 56.1
Manes.18G027000 Manihot esculenta HOM05D005848 ORTHO05D007532 1.4e-48 196.8 198 57.1
ClCG08G015110 Citrullus lanatus HOM05D005848 ORTHO05D007532 2.5e-48 196.1 196 55.1
FAN15G3081 Fragaria x ananassa HOM05D005848 ORTHO05D007532 2.5e-48 196.1 197 55.3
Cpa.g.sc36.76 Carica papaya HOM05D005848 ORTHO05D007532 3.2e-48 195.7 200 55.5
Rhsim07G0239300 Rhododendron simsii HOM05D005848 ORTHO05D007532 1.2e-47 193.7 196 56.1
FAN27G0156 Fragaria x ananassa HOM05D005848 ORTHO05D007532 1.6e-47 193.4 197 54.8
Actinidia15328 Actinidia chinensis HOM05D005848 ORTHO05D007532 2.1e-47 193.0 189 53.4
FvH4_2g39810 Fragaria vesca HOM05D005848 ORTHO05D007532 4.7e-47 191.8 197 55.3
TAR381G1506 Trochodendron aralioides HOM05D005848 ORTHO05D007532 8.0e-47 191.0 195 56.4
Sed0003570 Sechium edule HOM05D005848 ORTHO05D007532 1.4e-46 190.3 196 55.1
Sabra02G0198400 Salix brachista HOM05D005848 ORTHO05D007532 1.8e-46 189.9 196 55.1
FAN20G0176 Fragaria x ananassa HOM05D005848 ORTHO05D007532 2.3e-46 189.5 197 54.8
FAN20G3094 Fragaria x ananassa HOM05D005848 ORTHO05D007532 2.3e-46 189.5 197 54.8
PSO541G0294 Papaver somniferum HOM05D005848 ORTHO05D007532 3.0e-46 189.1 194 56.2
Lalb_Chr14g0369301 Lupinus albus HOM05D005848 ORTHO05D007532 3.9e-46 188.7 195 53.8
Nn1g04993 Nelumbo nucifera HOM05D005848 ORTHO05D007532 5.2e-46 188.3 195 52.8
vmacro04526 Vaccinium macrocarpon HOM05D005848 ORTHO05D007532 6.7e-46 188.0 197 56.3
PSO675G8513 Papaver somniferum HOM05D005848 ORTHO05D007532 2.0e-45 186.4 194 54.1
vmacro11198 Vaccinium macrocarpon HOM05D005848 ORTHO05D007532 4.4e-45 185.3 197 54.8
Lsat_1_v5_gn_1_17721 Lactuca sativa HOM05D005848 ORTHO05D007532 5.3e-43 178.3 200 52.5
Lj5g0008078 Lotus japonicus HOM05D005848 ORTHO05D007532 5.3e-43 178.3 197 50.3
Lj4A40T46 Lonicera japonica HOM05D005848 ORTHO05D007532 3.5e-42 175.6 196 51.5
CANSAT35G0174 Cannabis sativa HOM05D005848 ORTHO05D007532 4.5e-42 175.3 199 52.3
Medtr1g022235 Medicago truncatula HOM05D005848 ORTHO05D007532 3.8e-41 172.2 199 50.3
Duzib116G0609 Durio zibethinus HOM05D005848 ORTHO05D007532 5.0e-41 171.8 196 51.5
Nitab4.5_0006280g0010 Nicotiana tabacum HOM05D005848 ORTHO05D007532 5.0e-41 171.8 196 52.6
CDE01G0181 Ceratophyllum demersum HOM05D005848 ORTHO05D007532 1.1e-40 170.6 194 50.5
Eucgr.F01897 Eucalyptus grandis HOM05D005848 ORTHO05D007532 1.1e-40 170.6 195 52.8
Nitab4.5_0005373g0030 Nicotiana tabacum HOM05D005848 ORTHO05D007532 1.5e-40 170.2 196 52.6
TPR.G20173 Trifolium pratense HOM05D005848 ORTHO05D007532 7.2e-40 167.9 197 46.2
VMungo0647G1182 Vigna mungo HOM05D005848 ORTHO05D007532 7.2e-40 167.9 196 48.5
Thecc.08G026700 Theobroma cacao HOM05D005848 ORTHO05D007532 1.2e-39 167.2 200 50.5
Phvul.001G014532 Phaseolus vulgaris HOM05D005848 ORTHO05D007532 1.6e-39 166.8 196 49.0
Psat6g008800 Pisum sativum HOM05D005848 ORTHO05D007532 2.1e-39 166.4 195 48.7
AT1G75200 Arabidopsis thaliana HOM05D005848 ORTHO05D007532 2.7e-39 166.0 193 49.2
CARHR068530 Cardamine hirsuta HOM05D005848 ORTHO05D007532 2.7e-39 166.0 193 48.2
Ca_13375_v3 Cicer arietinum L. HOM05D005848 ORTHO05D007532 2.7e-39 166.0 196 47.4
arahy.Tifrunner.gnm1.ann1.U1EDB6 Arachis hypogaea HOM05D005848 ORTHO05D007532 4.7e-39 165.2 194 49.5
Aqoxy6G01108 Aquilegia oxysepala HOM05D005848 ORTHO05D007532 6.1e-39 164.9 199 49.7
AL2G35110 Arabidopsis lyrata HOM05D005848 ORTHO05D007532 6.1e-39 164.9 193 49.2
Peaxi162Scf00417g01212 Petunia axillaris HOM05D005848 ORTHO05D007532 6.1e-39 164.9 196 50.0
Sopen04g033930 Solanum pennellii HOM05D005848 ORTHO05D007532 6.1e-39 164.9 202 49.5
Cc10_g02880 Coffea canephora HOM05D005848 ORTHO05D007532 8.0e-39 164.5 200 48.5
BraA07t31621Z Brassica rapa HOM05D005848 ORTHO05D007532 1.4e-38 163.7 195 48.2
A07p40790 Brassica napus HOM05D005848 ORTHO05D007532 1.8e-38 163.3 195 48.2
arahy.Tifrunner.gnm1.ann1.B18DRP Arachis hypogaea HOM05D005848 ORTHO05D007532 2.3e-38 162.9 194 48.5
A07p28980 Brassica napus HOM05D005848 ORTHO05D007532 2.3e-38 162.9 197 48.2
BraA07t30539Z Brassica rapa HOM05D005848 ORTHO05D007532 2.3e-38 162.9 195 47.7
Sp5g30360 Schrenkiella parvula HOM05D005848 ORTHO05D007532 2.3e-38 162.9 198 48.0
C06p49180 Brassica napus HOM05D005848 ORTHO05D007532 3.0e-38 162.5 195 47.2
Glyma.14G075000 Glycine max HOM05D005848 ORTHO05D007532 3.0e-38 162.5 195 46.7
BolC6t39951H Brassica oleracea HOM05D005848 ORTHO05D007532 4.0e-38 162.2 195 47.2
AUR62013733 Chenopodium quinoa HOM05D005848 ORTHO05D007532 4.0e-38 162.2 195 46.7
MBI16_g31221_MAGBIO Magnolia biondii HOM05D005848 ORTHO05D007532 4.0e-38 162.2 192 50.5
PGSC0003DMG400004542 Solanum tuberosum HOM05D005848 ORTHO05D007532 5.2e-38 161.8 202 48.5
arahy.Tifrunner.gnm1.ann1.K656SJ Arachis hypogaea HOM05D005848 ORTHO05D007532 6.7e-38 161.4 194 48.5
arahy.Tifrunner.gnm1.ann1.R41T5G Arachis hypogaea HOM05D005848 ORTHO05D007532 6.7e-38 161.4 194 48.5
Solyc04g080340.3 Solanum lycopersicum HOM05D005848 ORTHO05D007532 6.7e-38 161.4 202 49.0
Carub.0002s2201 Capsella rubella HOM05D005848 ORTHO05D007532 8.8e-38 161.0 193 47.2
PGR031G0193 Punica granatum HOM05D005848 ORTHO05D007532 8.8e-38 161.0 193 48.7
Aa31LG4G5410 Aethionema arabicum HOM05D005848 ORTHO05D007532 1.2e-37 160.6 195 47.2
Gohir.A01G115800 Gossypium hirsutum HOM05D005848 ORTHO05D007532 1.2e-37 160.6 200 51.0
Gohir.D01G104100 Gossypium hirsutum HOM05D005848 ORTHO05D007532 2.0e-37 159.8 200 50.5
Gorai.002G128000 Gossypium raimondii HOM05D005848 ORTHO05D007532 2.0e-37 159.8 200 50.5
CAN.G1226.12 Capsicum annuum HOM05D005848 ORTHO05D007532 4.4e-37 158.7 196 49.5
AUR62023420 Chenopodium quinoa HOM05D005848 ORTHO05D007532 4.4e-37 158.7 197 46.7
Hund17082 Selenicereus undatus HOM05D005848 ORTHO05D007532 4.4e-37 158.7 198 44.9
THA.LOC104809061 Tarenaya hassleriana HOM05D005848 ORTHO05D007532 4.4e-37 158.7 191 46.1
EL10Ac1g00774 Beta vulgaris HOM05D005848 ORTHO05D007532 2.8e-36 156.0 195 46.2
Glyma.17G250400 Glycine max HOM05D005848 ORTHO05D007532 8.3e-36 154.5 199 46.2
Sc02g0006150 Simmondsia chinensis HOM05D005848 ORTHO05D007532 5.3e-35 151.8 194 45.4
Oeu049954.1 Olea europaea HOM05D005848 ORTHO05D007532 9.1e-35 151.0 202 46.0
Sed0016731 Sechium edule HOM05D005848 ORTHO05D007532 9.1e-35 151.0 132 62.1
Ah.05g173260 Amaranthus hybridus HOM05D005848 ORTHO05D007532 2.0e-34 149.8 195 43.1
COL.COLO4_26317 Corchorus olitorius HOM05D005848 ORTHO05D007532 2.0e-34 149.8 142 58.5
Migut.C00727 Erythranthe guttata HOM05D005848 ORTHO05D007532 1.3e-33 147.1 208 44.7
HPP92_012274 Vanilla planifolia HOM05D005848 ORTHO05D007532 2.2e-33 146.4 197 44.7
ECA247G2683 Erigeron canadensis HOM05D005848 ORTHO05D007532 8.5e-33 144.4 197 43.1
HanXRQChr02g0042111 Helianthus annuus HOM05D005848 ORTHO05D007532 8.5e-33 144.4 179 47.5
MSTRG.1277 Avicennia marina HOM05D005848 ORTHO05D007532 9.4e-32 141.0 197 45.2
SalBow7G2715 Salvia bowleyana HOM05D005848 ORTHO05D007532 2.1e-31 139.8 195 44.1
unitig_37.g12994 Utricularia gibba HOM05D005848 ORTHO05D007532 2.7e-31 139.4 198 43.9
Thhalv10018304m.g Eutrema salsugineum HOM05D005848 ORTHO05D007532 2.3e-30 136.3 148 48.6
SGA_v2.0_scaffold54G19521 Striga asiatica HOM05D005848 ORTHO05D007532 1.2e-29 134.0 208 42.3
ATR0733G119 Amborella trichopoda HOM05D005848 ORTHO05D007532 2.2e-28 129.8 230 40.0
DCAR_020974 Daucus carota HOM05D005848 ORTHO05D007532 7.0e-27 124.8 161 46.0
Ciclev10003946m.g Citrus clementina HOM05D005848 ORTHO05D007532 6.6e-25 118.2 131 49.6
SMO119G0034 Selaginella moellendorffii HOM05D005848 ORTHO05D007532 1.8e-22 110.2 147 40.8
AagrBONN_evm.TU.Sc2ySwM_362.2225 Anthoceros agrestis HOM05D005848 ORTHO05D007532 6.8e-22 108.2 147 38.8
Actinidia22546 Actinidia chinensis HOM05D005848 ORTHO05D007532 8.9e-22 107.8 186 40.3
Pp3c8_14160 Physcomitrium patens HOM05D005848 ORTHO05D007532 8.9e-22 107.8 146 40.4
CSS0006033 Camellia sinensis var. sinensis HOM05D005848 ORTHO05D007532 2.6e-21 106.3 166 40.4
Mapoly0010s0191 Marchantia polymorpha HOM05D005848 ORTHO05D007532 3.4e-21 105.9 157 42.0
CBR_g26428 Chara braunii HOM05D005848 ORTHO05D007532 5.6e-16 88.6 152 31.6
arahy.Tifrunner.gnm1.ann1.WCXU76 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.8e-14 83.6 198 35.4
arahy.Tifrunner.gnm1.ann1.3X8B6N Arachis hypogaea HOM05D008504 ORTHO05D010707 1.2e-13 80.9 198 33.8
arahy.Tifrunner.gnm1.ann1.FHH1YD Arachis hypogaea HOM05D008504 ORTHO05D010707 2.0e-13 80.1 197 33.5
arahy.Tifrunner.gnm1.ann1.PBP9SE Arachis hypogaea HOM05D008504 ORTHO05D010707 2.0e-13 80.1 204 34.3
arahy.Tifrunner.gnm1.ann1.DKU1F8 Arachis hypogaea HOM05D008504 ORTHO05D010707 2.6e-13 79.7 192 34.4
arahy.Tifrunner.gnm1.ann1.A1ZBG7 Arachis hypogaea HOM05D008504 ORTHO05D010707 5.8e-13 78.6 198 34.3
arahy.Tifrunner.gnm1.ann1.QZ4EVV Arachis hypogaea HOM05D008504 ORTHO05D010707 5.8e-13 78.6 198 34.3
arahy.Tifrunner.gnm1.ann1.UJY401 Arachis hypogaea HOM05D008504 ORTHO05D010707 9.8e-13 77.8 204 33.8
arahy.Tifrunner.gnm1.ann1.5K2DU6 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.3e-12 77.4 202 33.2
arahy.Tifrunner.gnm1.ann1.HCH4H8 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.7e-12 77.0 148 37.8
arahy.Tifrunner.gnm1.ann1.XH95LH Arachis hypogaea HOM05D008504 ORTHO05D010707 1.7e-12 77.0 148 37.8
arahy.Tifrunner.gnm1.ann1.0E19IK Arachis hypogaea HOM05D008504 ORTHO05D010707 2.2e-12 76.6 199 33.2
arahy.Tifrunner.gnm1.ann1.0TG4XQ Arachis hypogaea HOM05D008504 ORTHO05D010707 2.2e-12 76.6 199 33.2
arahy.Tifrunner.gnm1.ann1.2I4AA8 Arachis hypogaea HOM05D008504 ORTHO05D010707 2.2e-12 76.6 199 33.2
arahy.Tifrunner.gnm1.ann1.5RQB9J Arachis hypogaea HOM05D008504 ORTHO05D010707 2.2e-12 76.6 199 33.2
arahy.Tifrunner.gnm1.ann1.HMY8CZ Arachis hypogaea HOM05D008504 ORTHO05D010707 2.2e-12 76.6 198 33.3
arahy.Tifrunner.gnm1.ann1.PE8RGD Arachis hypogaea HOM05D008504 ORTHO05D010707 2.2e-12 76.6 199 33.2
arahy.Tifrunner.gnm1.ann1.CY9GMY Arachis hypogaea HOM05D008504 ORTHO05D010707 2.9e-12 76.3 199 32.7
arahy.Tifrunner.gnm1.ann1.ERGP6F Arachis hypogaea HOM05D008504 ORTHO05D010707 1.1e-11 74.3 198 32.3
arahy.Tifrunner.gnm1.ann1.RM5ZHJ Arachis hypogaea HOM05D008504 ORTHO05D010707 1.9e-11 73.6 196 32.7
arahy.Tifrunner.gnm1.ann1.W88FQP Arachis hypogaea HOM05D008504 ORTHO05D010707 1.9e-11 73.6 196 32.7
arahy.Tifrunner.gnm1.ann1.2PI4SD Arachis hypogaea HOM05D008504 ORTHO05D010707 1.2e-10 70.9 201 31.3
arahy.Tifrunner.gnm1.ann1.3HSW25 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.2e-10 70.9 201 31.3
arahy.Tifrunner.gnm1.ann1.D90TM1 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.6e-10 70.5 200 32.0
arahy.Tifrunner.gnm1.ann1.L2A829 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.6e-10 70.5 148 35.8
arahy.Tifrunner.gnm1.ann1.QMM8JA Arachis hypogaea HOM05D008504 ORTHO05D010707 3.5e-10 69.3 154 35.7
arahy.Tifrunner.gnm1.ann1.3C5L0V Arachis hypogaea HOM05D008504 ORTHO05D010707 7.8e-10 68.2 207 29.0
arahy.Tifrunner.gnm1.ann1.978BNZ Arachis hypogaea HOM05D008504 ORTHO05D010707 7.8e-10 68.2 207 29.0
MCO11G535 Micromonas commoda HOM05D005848 ORTHO05D007532 1.0e-09 67.8 86 39.5
arahy.Tifrunner.gnm1.ann1.W9IIXQ Arachis hypogaea HOM05D008504 ORTHO05D010707 1.3e-09 67.4 197 32.0
arahy.Tifrunner.gnm1.ann1.J252LG Arachis hypogaea HOM05D008504 ORTHO05D010707 5.0e-09 65.5 141 36.2
arahy.Tifrunner.gnm1.ann1.XQPR1E Arachis hypogaea HOM05D008504 ORTHO05D010707 6.6e-09 65.1 107 43.9
Cre14.g623300 Chlamydomonas reinhardtii HOM05D005848 ORTHO05D007532 8.6e-09 64.7 120 34.2
arahy.Tifrunner.gnm1.ann1.BZE4S9 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.5e-08 63.9 107 43.0
arahy.Tifrunner.gnm1.ann1.F5F6FM Arachis hypogaea HOM05D008504 ORTHO05D010707 6.2e-07 58.5 107 42.1
arahy.Tifrunner.gnm1.ann1.00W0BQ Arachis hypogaea HOM05D008504 ORTHO05D010707 1.1e-06 57.8 110 41.8
arahy.Tifrunner.gnm1.ann1.MCNZ84 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.1e-06 57.8 110 41.8
arahy.Tifrunner.gnm1.ann1.B27QWS Arachis hypogaea HOM05D008504 ORTHO05D010707 1.4e-06 57.4 107 41.1
arahy.Tifrunner.gnm1.ann1.NP4SZW Arachis hypogaea HOM05D008504 ORTHO05D010707 3.1e-06 56.2 107 41.1
arahy.Tifrunner.gnm1.ann1.U1D3X5 Arachis hypogaea HOM05D008504 ORTHO05D010707 4.0e-06 55.8 115 32.2
Zm00001eb178320 Zea mays HOM05D001049 ORTHO05D001986 5.2e-06 55.5 152 32.2
C06p32750 Brassica napus HOM05D005848 ORTHO05D007532 6.8e-06 55.1 64 53.1
BolC6t38398H Brassica oleracea HOM05D005848 ORTHO05D007532 6.8e-06 55.1 64 53.1


User provided reference genes

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