Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.16G048000 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.7e-54 214.2 100 100.0
CiPaw.16G063000 Carya illinoinensis HOM05D000003 ORTHO05D000004 7.1e-42 173.7 98 80.6
CiPaw.14G109400 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.1e-21 106.7 96 46.9
CiPaw.10G125800 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.4e-21 106.3 91 48.4
CiPaw.03G246300 Carya illinoinensis HOM05D000003 ORTHO05D000022 2.3e-16 89.0 98 40.8
CiPaw.15G160400 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.1e-15 86.7 98 40.8
CiPaw.04G130600 Carya illinoinensis HOM05D000155 ORTHO05D000022 1.3e-14 83.2 85 36.5
CiPaw.14G108600 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.6e-14 82.8 85 41.2
CiPaw.04G137600 Carya illinoinensis HOM05D000155 ORTHO05D000022 8.1e-14 80.5 98 36.7
Sopen01g023890 Solanum pennellii HOM05D000003 ORTHO05D015569 3.8e-11 71.6 99 33.3
Sopen08g024310 Solanum pennellii HOM05D000003 ORTHO05D000006 6.5e-11 70.9 85 37.6
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-10 70.1 85 35.3
Sopen11g008140 Solanum pennellii HOM05D000024 ORTHO05D000022 1.1e-10 70.1 85 36.5
SGA_v2.0_scaffold61G21206 Striga asiatica HOM05D000003 ORTHO05D000006 1.1e-10 70.1 98 32.7
Sopen01g026920 Solanum pennellii HOM05D000003 ORTHO05D000022 1.9e-10 69.3 85 32.9
Sopen08g015240 Solanum pennellii HOM05D000003 ORTHO05D000004 3.2e-10 68.6 85 35.3
CiPaw.08G143400 Carya illinoinensis HOM05D000003 ORTHO05D000004 4.2e-10 68.2 84 38.1
Nitab4.5_0000335g0260 Nicotiana tabacum HOM05D000003 ORTHO05D000004 4.2e-10 68.2 73 42.5
Sopen00g003390 Solanum pennellii HOM05D000003 ORTHO05D000004 4.2e-10 68.2 85 35.3
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 5.5e-10 67.8 85 35.3
PGSC0003DMG400002381 Solanum tuberosum HOM05D000003 ORTHO05D006296 7.1e-10 67.4 82 42.7
Sopen05g017710 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-09 66.6 85 34.1
PGSC0003DMG400046872 Solanum tuberosum HOM05D000003 ORTHO05D000022 2.1e-09 65.9 85 32.9
Sopen02g039300 Solanum pennellii HOM05D000003 ORTHO05D000004 3.5e-09 65.1 85 32.9
PGSC0003DMG402018748 Solanum tuberosum HOM05D000003 ORTHO05D000004 4.6e-09 64.7 84 35.7
Sopen09g015010 Solanum pennellii HOM05D000003 ORTHO05D000022 6.0e-09 64.3 85 32.9
PGSC0003DMG400040103 Solanum tuberosum HOM05D000003 ORTHO05D000022 1.3e-08 63.2 89 31.5
Cc00_g15260 Coffea canephora HOM05D000003 ORTHO05D000004 1.8e-08 62.8 73 37.0
Sopen07g013710 Solanum pennellii HOM05D000003 ORTHO05D000004 3.9e-08 61.6 89 31.5
Sopen00g001090 Solanum pennellii HOM05D000003 ORTHO05D000004 6.7e-08 60.8 85 30.6
PGSC0003DMG400043208 Solanum tuberosum HOM05D000003 ORTHO05D000022 6.7e-08 60.8 90 32.2
Sopen00g007260 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-07 60.1 85 29.4
Sopen08g015180 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-07 60.1 66 34.8
Sopen09g012310 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-07 60.1 85 30.6
PGSC0003DMG400035850 Solanum tuberosum HOM05D000003 ORTHO05D000022 1.1e-07 60.1 85 30.6
Sopen00g012040 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-07 59.3 85 32.9
Sopen09g027800 Solanum pennellii HOM05D000006 ORTHO05D000001 4.3e-07 58.2 84 29.8
Sopen06g007150 Solanum pennellii HOM05D000003 ORTHO05D000004 9.6e-07 57.0 85 34.1
MBI04_g13838_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.6e-06 56.2 84 36.9
MBI11_g46262_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.1e-06 55.8 86 32.6
MBI15_g29196_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 2.8e-06 55.5 87 33.3


User provided reference genes

Program Settings