Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G075600 Carya illinoinensis HOM05D005164 ORTHO05D006398 4.6e-217 757.7 398 100.0
CiPaw.16G055400 Carya illinoinensis HOM05D005164 ORTHO05D006398 2.2e-211 738.8 398 97.0
QL02p007897 Quercus lobata HOM05D005164 ORTHO05D006398 8.6e-208 726.9 397 95.7
Cfa018135 Carpinus fangiana HOM05D005164 ORTHO05D006398 1.2e-206 723.0 398 95.0
COL.COLO4_26343 Corchorus olitorius HOM05D005164 ORTHO05D006398 7.5e-204 713.8 398 93.0
Manes.18G028500 Manihot esculenta HOM05D005164 ORTHO05D006398 7.5e-204 713.8 398 93.7
Thecc.08G024200 Theobroma cacao HOM05D005164 ORTHO05D006398 7.5e-204 713.8 398 92.7
TWI56G0324 Tripterygium wilfordii HOM05D005164 ORTHO05D006398 2.2e-203 712.2 398 93.2
Gohir.A03G078200 Gossypium hirsutum HOM05D005164 ORTHO05D006398 3.7e-203 711.4 398 92.7
Potri.002G263200 Populus trichocarpa HOM05D005164 ORTHO05D006398 3.7e-203 711.4 398 92.5
Potri.014G180800 Populus trichocarpa HOM05D005164 ORTHO05D006398 4.9e-203 711.1 398 93.2
Duzib041G0411 Durio zibethinus HOM05D005164 ORTHO05D006398 8.3e-203 710.3 398 92.2
Gohir.D02G094300 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.1e-202 709.9 398 92.5
Gorai.005G107200 Gossypium raimondii HOM05D005164 ORTHO05D006398 1.1e-202 709.9 398 92.5
Dinv36062 Davidia involucrata HOM05D005164 ORTHO05D006398 1.4e-202 709.5 398 93.2
Ciclev10001386m.g Citrus clementina HOM05D005164 ORTHO05D006398 2.4e-202 708.8 398 93.0
GSVIVG01009684001 Vitis vinifera HOM05D005164 ORTHO05D006398 3.2e-202 708.4 398 93.5
Lj4C784T1 Lonicera japonica HOM05D005164 ORTHO05D006398 5.4e-202 707.6 398 92.7
Glyma.09G231100 Glycine max HOM05D005164 ORTHO05D006398 7.1e-202 707.2 398 93.0
Ca_25003_v3 Cicer arietinum L. HOM05D005164 ORTHO05D006398 1.6e-201 706.1 398 92.2
Glyma.12G005400 Glycine max HOM05D005164 ORTHO05D006398 2.1e-201 705.7 398 92.7
RcHm_v2.0_Chr6g0300751 Rosa chinensis HOM05D005164 ORTHO05D006398 4.6e-201 704.5 398 92.2
Eucgr.F01909 Eucalyptus grandis HOM05D005164 ORTHO05D006398 6.0e-201 704.1 398 91.5
Phvul.011G006200 Phaseolus vulgaris HOM05D005164 ORTHO05D006398 1.7e-200 702.6 398 92.2
VMungo1127G0366 Vigna mungo HOM05D005164 ORTHO05D006398 2.3e-200 702.2 398 92.2
CANSAT64G0480 Cannabis sativa HOM05D005164 ORTHO05D006398 3.0e-200 701.8 398 92.0
HanXRQChr02g0040181 Helianthus annuus HOM05D005164 ORTHO05D006398 2.5e-199 698.7 398 91.5
Lsat_1_v5_gn_1_17561 Lactuca sativa HOM05D005164 ORTHO05D006398 3.3e-199 698.4 398 92.0
MELO3C003848.2 Cucumis melo HOM05D005164 ORTHO05D006398 4.3e-199 698.0 398 91.5
CsaV3_3G045000 Cucumis sativus L. HOM05D005164 ORTHO05D006398 4.3e-199 698.0 398 91.5
CANSAT25G0119 Cannabis sativa HOM05D005164 ORTHO05D006398 5.6e-199 697.6 403 90.6
Lj3g0003260 Lotus japonicus HOM05D005164 ORTHO05D006398 5.6e-199 697.6 398 91.2
DCAR_019523 Daucus carota HOM05D005164 ORTHO05D006398 1.6e-198 696.0 398 91.7
TAR376G0296 Trochodendron aralioides HOM05D005164 ORTHO05D006398 2.1e-198 695.7 398 91.2
Psat3g167280 Pisum sativum HOM05D005164 ORTHO05D006398 2.8e-198 695.3 398 91.0
SalBow8G2733 Salvia bowleyana HOM05D005164 ORTHO05D006398 3.6e-198 694.9 398 91.0
Sed0021376 Sechium edule HOM05D005164 ORTHO05D006398 4.7e-198 694.5 398 91.0
Cc10_g03080 Coffea canephora HOM05D005164 ORTHO05D006398 2.4e-197 692.2 398 91.0
Nn5g29540 Nelumbo nucifera HOM05D005164 ORTHO05D006398 2.4e-197 692.2 398 89.9
ECA247G1488 Erigeron canadensis HOM05D005164 ORTHO05D006398 3.1e-197 691.8 398 91.5
Medtr0173s0030 Medicago truncatula HOM05D005164 ORTHO05D006398 3.1e-197 691.8 398 90.7
Gohir.A05G260000 Gossypium hirsutum HOM05D005164 ORTHO05D006398 4.0e-197 691.4 398 89.7
Sc02g0006310 Simmondsia chinensis HOM05D005164 ORTHO05D006398 4.0e-197 691.4 398 90.2
MSTRG.24294 Avicennia marina HOM05D005164 ORTHO05D006398 6.8e-197 690.6 398 90.7
FvH4_2g40000 Fragaria vesca HOM05D005164 ORTHO05D006398 8.9e-197 690.3 399 90.5
FAN27G0257 Fragaria x ananassa HOM05D005164 ORTHO05D006398 8.9e-197 690.3 399 90.5
PGR031G3751 Punica granatum HOM05D005164 ORTHO05D006398 1.2e-196 689.9 398 90.2
Gorai.002G128900 Gossypium raimondii HOM05D005164 ORTHO05D006398 1.5e-196 689.5 398 89.2
FAN15G2586 Fragaria x ananassa HOM05D005164 ORTHO05D006398 2.6e-196 688.7 399 90.2
EL10Ac8g20456 Beta vulgaris HOM05D005164 ORTHO05D006398 9.9e-196 686.8 398 89.4
Gohir.D01G104900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.3e-195 686.4 398 88.7
Sed0001534 Sechium edule HOM05D005164 ORTHO05D006398 1.3e-195 686.4 399 90.2
Gohir.D05G261900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 2.2e-195 685.6 398 89.2
Aqoxy6G01049 Aquilegia oxysepala HOM05D005164 ORTHO05D006398 3.8e-195 684.9 398 88.2
Gohir.A01G116500 Gossypium hirsutum HOM05D005164 ORTHO05D006398 4.9e-195 684.5 398 88.7
Solyc04g080160.3 Solanum lycopersicum HOM05D005164 ORTHO05D006398 4.9e-195 684.5 398 88.9
Sopen04g033750 Solanum pennellii HOM05D005164 ORTHO05D006398 4.9e-195 684.5 398 88.9
FAN20G1227 Fragaria x ananassa HOM05D005164 ORTHO05D006398 8.4e-195 683.7 399 89.5
PGSC0003DMG400005163 Solanum tuberosum HOM05D005164 ORTHO05D006398 1.4e-194 682.9 398 88.7
Peaxi162Scf00690g00117 Petunia axillaris HOM05D005164 ORTHO05D006398 3.2e-194 681.8 398 89.4
AUR62014895 Chenopodium quinoa HOM05D005164 ORTHO05D006398 5.4e-194 681.0 398 89.7
Gorai.009G273800 Gossypium raimondii HOM05D005164 ORTHO05D006398 5.4e-194 681.0 401 88.5
MD08G1033300 Malus domestica HOM05D005164 ORTHO05D006398 4.6e-193 677.9 398 88.2
Hund21200 Selenicereus undatus HOM05D005164 ORTHO05D006398 4.6e-193 677.9 398 89.2
ATR0733G076 Amborella trichopoda HOM05D005164 ORTHO05D006398 1.3e-192 676.4 398 87.9
Migut.N00498 Erythranthe guttata HOM05D005164 ORTHO05D006398 1.3e-192 676.4 398 88.7
Haze_17990 Corylus avellana HOM05D005164 ORTHO05D006398 1.7e-192 676.0 501 75.6
THA.LOC104822841 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 5.1e-192 674.5 398 87.7
THA.LOC104814156 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 2.5e-191 672.2 399 88.0
MD15G1029900 Malus domestica HOM05D005164 ORTHO05D006398 9.6e-191 670.2 406 86.2
CAN.G1126.40 Capsicum annuum HOM05D005164 ORTHO05D006398 1.8e-189 666.0 398 86.9
CDE02G4403 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 1.8e-189 666.0 398 86.4
AUR62031100 Chenopodium quinoa HOM05D005164 ORTHO05D006398 4.9e-187 657.9 398 87.4
ClCG05G019140 Citrullus lanatus HOM05D005164 ORTHO05D006398 4.9e-187 657.9 398 87.7
Os03g0197400 Oryza sativa ssp. japonica HOM05D005164 ORTHO05D006398 6.4e-187 657.5 400 84.8
Prupe.1G381600 Prunus persica HOM05D005164 ORTHO05D006398 9.3e-186 653.7 398 87.2
Hma1.2p1_0023F.1_g014900 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 1.2e-185 653.3 490 74.3
Oeu009868.2 Olea europaea HOM05D005164 ORTHO05D006398 2.1e-185 652.5 477 75.1
Sabra14G0141000 Salix brachista HOM05D005164 ORTHO05D006398 4.6e-185 651.4 437 81.9
unitig_22.g6774 Utricularia gibba HOM05D005164 ORTHO05D006398 6.0e-185 651.0 392 87.0
AT5G42970 Arabidopsis thaliana HOM05D005164 ORTHO05D006398 1.7e-184 649.4 398 84.4
Carub.0008s0578 Capsella rubella HOM05D005164 ORTHO05D006398 1.7e-184 649.4 398 84.2
CDE01G0241 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 1.7e-184 649.4 402 84.1
A06p48120 Brassica napus HOM05D005164 ORTHO05D006398 2.3e-184 649.0 398 84.9
BraA06t27681Z Brassica rapa HOM05D005164 ORTHO05D006398 2.3e-184 649.0 398 84.9
Rhsim06G0035000 Rhododendron simsii HOM05D005164 ORTHO05D006398 2.3e-184 649.0 418 83.7
Sp2g07720 Schrenkiella parvula HOM05D005164 ORTHO05D006398 2.3e-184 649.0 398 84.9
BcaC06g31734 Brassica carinata HOM05D005164 ORTHO05D006398 3.9e-184 648.3 398 84.7
CARHR181050 Cardamine hirsuta HOM05D005164 ORTHO05D006398 8.7e-184 647.1 398 84.7
Thhalv10003436m.g Eutrema salsugineum HOM05D005164 ORTHO05D006398 1.5e-183 646.4 398 84.9
BcaC02g10785 Brassica carinata HOM05D005164 ORTHO05D006398 1.9e-183 646.0 398 84.7
C04p25110 Brassica napus HOM05D005164 ORTHO05D006398 1.9e-183 646.0 398 84.7
BolC4t24015H Brassica oleracea HOM05D005164 ORTHO05D006398 1.9e-183 646.0 398 84.7
Aa31LG9G13090 Aethionema arabicum HOM05D005164 ORTHO05D006398 4.3e-183 644.8 398 85.4
Zm00001eb008060 Zea mays HOM05D005164 ORTHO05D006398 1.3e-182 643.3 440 78.0
A02p27610 Brassica napus HOM05D005164 ORTHO05D006398 6.2e-182 641.0 398 84.2
BolC2t10406H Brassica oleracea HOM05D005164 ORTHO05D006398 6.2e-182 641.0 398 84.2
BraA02t07794Z Brassica rapa HOM05D005164 ORTHO05D006398 6.2e-182 641.0 398 84.2
AL8G17800 Arabidopsis lyrata HOM05D005164 ORTHO05D006398 1.4e-181 639.8 398 83.2
BcaB07g30597 Brassica carinata HOM05D005164 ORTHO05D006398 1.8e-181 639.4 398 83.4
BcaC03g16546 Brassica carinata HOM05D005164 ORTHO05D006398 3.1e-181 638.6 398 83.9
C02p43640 Brassica napus HOM05D005164 ORTHO05D006398 3.1e-181 638.6 398 83.9
Nitab4.5_0000110g0500 Nicotiana tabacum HOM05D005164 ORTHO05D006398 2.6e-180 635.6 398 84.2
Actinidia22558 Actinidia chinensis HOM05D005164 ORTHO05D006398 5.8e-180 634.4 368 90.5
Hma1.2p1_0469F.1_g159190 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 1.3e-179 633.3 439 79.5
SGA_v2.0_scaffold326G48708 Striga asiatica HOM05D005164 ORTHO05D006398 1.9e-178 629.4 355 91.8
PSO675G3600 Papaver somniferum HOM05D005164 ORTHO05D006398 5.4e-178 627.9 398 81.9
PSO541G6137 Papaver somniferum HOM05D005164 ORTHO05D006398 2.1e-177 625.9 398 81.4
Nitab4.5_0010187g0010 Nicotiana tabacum HOM05D005164 ORTHO05D006398 1.3e-176 623.2 398 83.2
Atru.chr13.515 Acer truncatum HOM05D005164 ORTHO05D006398 1.8e-176 622.9 354 92.4
Manes.05G161900 Manihot esculenta HOM05D005164 ORTHO05D006398 1.6e-174 616.3 354 90.1
MBI17_g39721_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 1.2e-172 610.1 431 77.5
Mapoly0072s0034 Marchantia polymorpha HOM05D005164 ORTHO05D006398 4.9e-171 604.7 398 77.1
TPR.G3648 Trifolium pratense HOM05D005164 ORTHO05D006398 2.1e-169 599.4 387 83.7
AagrBONN_evm.TU.Sc2ySwM_117.2514 Anthoceros agrestis HOM05D005164 ORTHO05D006398 6.2e-166 587.8 397 75.3
Pp3c5_28450 Physcomitrium patens HOM05D005164 ORTHO05D006398 6.2e-166 587.8 398 75.6
SMO364G0673 Selaginella moellendorffii HOM05D005164 ORTHO05D006398 2.2e-163 579.3 398 74.4
vmacro21627 Vaccinium macrocarpon HOM05D005164 ORTHO05D006398 3.0e-160 568.9 398 78.6
Duzib093G0265 Durio zibethinus HOM05D005164 ORTHO05D006398 3.2e-154 548.9 398 75.4
CBR_g36268 Chara braunii HOM05D005164 ORTHO05D006398 2.5e-146 522.7 396 68.7
Actinidia15313 Actinidia chinensis HOM05D005164 ORTHO05D006398 7.9e-145 517.7 419 69.9
HPP92_024905 Vanilla planifolia HOM05D005164 ORTHO05D006398 4.1e-141 505.4 347 76.4
CSS0020238 Camellia sinensis var. sinensis HOM05D005164 ORTHO05D006398 7.7e-140 501.1 271 95.6
CAN.G416.53 Capsicum annuum HOM05D005164 ORTHO05D006398 2.2e-123 446.4 312 77.2
RcHm_v2.0_Chr2g0166611 Rosa chinensis HOM05D005164 ORTHO05D006398 2.8e-110 402.9 226 92.5
Cre11.g478240 Chlamydomonas reinhardtii HOM05D005164 ORTHO05D006398 3.5e-108 396.0 395 53.4
MCO16G668 Micromonas commoda HOM05D005164 ORTHO05D006398 2.6e-103 379.8 405 50.9
Cpa.g.sc64.68 Carica papaya HOM05D005164 ORTHO05D006398 7.0e-101 371.7 216 88.9
PRCOL_00006114 Prasinoderma coloniale HOM05D005164 ORTHO05D006398 3.9e-91 339.3 401 48.6
SEGI_27147 Sequoiadendron giganteum HOM05D005164 ORTHO05D006398 3.2e-85 319.7 214 77.1
Sopen04g033730 Solanum pennellii HOM05D005164 ORTHO05D006398 2.8e-81 306.6 214 74.3
GSVIVG01023193001 Vitis vinifera HOM05D005164 ORTHO05D006398 9.6e-66 255.0 150 90.0
GSVIVG01003780001 Vitis vinifera HOM05D005164 ORTHO05D006398 4.8e-65 252.7 150 88.7
Cfa024373 Carpinus fangiana HOM05D005164 ORTHO05D006398 4.3e-58 229.6 319 42.3
MBI17_g35116_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 2.8e-57 226.9 183 71.6
Carub.0004s0266 Capsella rubella HOM05D005164 ORTHO05D006398 4.3e-50 203.0 146 71.2
arahy.Tifrunner.gnm1.ann1.ABX6XB Arachis hypogaea HOM05D005164 ORTHO05D006398 8.7e-43 178.7 243 50.2
Haze_26904 Corylus avellana HOM05D005164 ORTHO05D006398 2.0e-39 167.5 205 44.4
arahy.Tifrunner.gnm1.ann1.D3INNH Arachis hypogaea HOM05D005164 ORTHO05D006398 4.5e-39 166.4 95 89.5
arahy.Tifrunner.gnm1.ann1.R33BY8 Arachis hypogaea HOM05D005164 ORTHO05D006398 4.5e-39 166.4 95 89.5
arahy.Tifrunner.gnm1.ann1.ZV61IE Arachis hypogaea HOM05D005164 ORTHO05D006398 1.2e-15 88.6 71 69.0
TPR.G136 Trifolium pratense HOM05D005164 ORTHO05D006398 2.0e-15 87.8 49 81.6
arahy.Tifrunner.gnm1.ann1.2K5AT5 Arachis hypogaea HOM05D005164 ORTHO05D006398 1.7e-09 68.2 47 72.3
PSO170G5175 Papaver somniferum HOM05D001185 ORTHO05D003777 5.4e-08 63.2 299 25.4
PSO700G0370 Papaver somniferum HOM05D001185 ORTHO05D003777 1.6e-07 61.6 299 25.4
Lalb_Chr07g0184681 Lupinus albus HOM05D001185 ORTHO05D003777 4.5e-07 60.1 318 23.3
ECA240G1489 Erigeron canadensis HOM05D001185 ORTHO05D003777 7.7e-07 59.3 320 24.1
Potri.007G076900 Populus trichocarpa HOM05D001185 ORTHO05D003777 1.3e-06 58.5 307 25.1
TWI31G0616 Tripterygium wilfordii HOM05D001185 ORTHO05D003777 1.3e-06 58.5 320 24.1
Carub.0006s0834 Capsella rubella HOM05D001185 ORTHO05D003777 1.7e-06 58.2 319 24.1
Ca_17672_v3 Cicer arietinum L. HOM05D001185 ORTHO05D003777 1.7e-06 58.2 318 24.2
Lj4g0024278 Lotus japonicus HOM05D001185 ORTHO05D003777 1.7e-06 58.2 318 24.2
Lj2A569G64 Lonicera japonica HOM05D001185 ORTHO05D003777 2.2e-06 57.8 322 24.2
MD02G1223100 Malus domestica HOM05D001185 ORTHO05D003777 2.2e-06 57.8 319 24.1
AT5G09900 Arabidopsis thaliana HOM05D001185 ORTHO05D003777 2.9e-06 57.4 319 25.1
BolC3t13011H Brassica oleracea HOM05D001185 ORTHO05D003777 2.9e-06 57.4 404 22.5
CANSAT01G1300 Cannabis sativa HOM05D001185 ORTHO05D003777 2.9e-06 57.4 323 23.8
PSO339G0818 Papaver somniferum HOM05D001185 ORTHO05D003777 2.9e-06 57.4 299 24.4
Sp6g33510 Schrenkiella parvula HOM05D001185 ORTHO05D003777 2.9e-06 57.4 404 22.0
Sed0017410 Sechium edule HOM05D001185 ORTHO05D003777 3.8e-06 57.0 320 22.5
Ca_15772_v3 Cicer arietinum L. HOM05D001185 ORTHO05D003777 5.0e-06 56.6 318 24.2
Eucgr.C01514 Eucalyptus grandis HOM05D001185 ORTHO05D003777 5.0e-06 56.6 415 23.1
Sabra07G0064800 Salix brachista HOM05D001185 ORTHO05D003777 5.0e-06 56.6 307 24.8
VMungo0251G0756 Vigna mungo HOM05D001185 ORTHO05D003777 5.0e-06 56.6 318 23.6
Glyma.05G186600 Glycine max HOM05D001185 ORTHO05D003777 6.5e-06 56.2 318 24.5
TWI79G1157 Tripterygium wilfordii HOM05D001185 ORTHO05D003777 6.5e-06 56.2 319 22.9
Carub.0008s2557 Capsella rubella HOM05D001185 ORTHO05D003777 8.5e-06 55.8 319 23.5
CDE06G2150 Ceratophyllum demersum HOM05D001185 ORTHO05D003777 8.5e-06 55.8 319 24.1
Thhalv10013557m.g Eutrema salsugineum HOM05D001185 ORTHO05D003777 8.5e-06 55.8 404 22.8
Medtr8g092450 Medicago truncatula HOM05D001185 ORTHO05D003777 8.5e-06 55.8 318 23.9
Phvul.002G267700 Phaseolus vulgaris HOM05D001185 ORTHO05D003777 8.5e-06 55.8 318 23.6
Sed0021912 Sechium edule HOM05D001185 ORTHO05D003777 8.5e-06 55.8 319 22.6


User provided reference genes

Program Settings