Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.15G069200 Carya illinoinensis HOM05D005338 ORTHO05D006550 1.2e-115 419.9 218 100.0
Cfa002226 Carpinus fangiana HOM05D005338 ORTHO05D006550 4.5e-110 401.4 218 94.5
QL02p007082 Quercus lobata HOM05D005338 ORTHO05D006550 2.8e-107 392.1 217 93.1
Cfa018461 Carpinus fangiana HOM05D005338 ORTHO05D006550 4.7e-107 391.3 215 93.5
Actinidia15288 Actinidia chinensis HOM05D005338 ORTHO05D006550 2.3e-106 389.0 218 89.9
SGA_v2.0_scaffold4G02341 Striga asiatica HOM05D005338 ORTHO05D006550 4.0e-106 388.3 218 90.8
CSS0015965 Camellia sinensis var. sinensis HOM05D005338 ORTHO05D006550 8.9e-106 387.1 218 89.0
Cpa.g.sc337.5 Carica papaya HOM05D005338 ORTHO05D006550 1.2e-105 386.7 218 89.9
GSVIVG01009622001 Vitis vinifera HOM05D005338 ORTHO05D006550 3.4e-105 385.2 215 91.2
MSTRG.2958 Avicennia marina HOM05D005338 ORTHO05D006550 4.4e-105 384.8 218 89.9
Nitab4.5_0003384g0030 Nicotiana tabacum HOM05D005338 ORTHO05D006550 5.7e-105 384.4 218 87.6
Cc07_g04760 Coffea canephora HOM05D005338 ORTHO05D006550 9.8e-105 383.6 218 89.4
Migut.H00565 Erythranthe guttata HOM05D005338 ORTHO05D006550 2.2e-104 382.5 218 88.1
Nitab4.5_0000154g0040 Nicotiana tabacum HOM05D005338 ORTHO05D006550 6.4e-104 380.9 217 87.1
Glyma.15G160500 Glycine max HOM05D005338 ORTHO05D006550 8.3e-104 380.6 218 88.5
MBI01_g22964_MAGBIO Magnolia biondii HOM05D005338 ORTHO05D006550 1.8e-103 379.4 218 87.6
Medtr2g438770 Medicago truncatula HOM05D005338 ORTHO05D006550 3.2e-103 378.6 218 88.1
VMungo1215G3044 Vigna mungo HOM05D005338 ORTHO05D006550 5.4e-103 377.9 218 88.5
Oeu012884.1 Olea europaea HOM05D005338 ORTHO05D006550 7.0e-103 377.5 218 87.6
Ciclev10026443m.g Citrus clementina HOM05D005338 ORTHO05D006550 9.2e-103 377.1 211 89.6
Duzib147G0908 Durio zibethinus HOM05D005338 ORTHO05D006550 9.2e-103 377.1 218 87.2
Gorai.007G236400 Gossypium raimondii HOM05D005338 ORTHO05D006550 9.2e-103 377.1 211 90.5
CAN.G162.113 Capsicum annuum HOM05D005338 ORTHO05D006550 1.2e-102 376.7 215 87.0
arahy.Tifrunner.gnm1.ann1.82M2ZV Arachis hypogaea HOM05D005338 ORTHO05D006550 2.0e-102 375.9 218 88.1
arahy.Tifrunner.gnm1.ann1.F09FAE Arachis hypogaea HOM05D005338 ORTHO05D006550 2.0e-102 375.9 218 88.1
arahy.Tifrunner.gnm1.ann1.N4382H Arachis hypogaea HOM05D005338 ORTHO05D006550 2.0e-102 375.9 218 88.1
arahy.Tifrunner.gnm1.ann1.VZ94AI Arachis hypogaea HOM05D005338 ORTHO05D006550 2.0e-102 375.9 218 88.1
SalBow1G1006 Salvia bowleyana HOM05D000168 ORTHO05D006550 2.0e-102 375.9 218 88.1
CANSAT25G1955 Cannabis sativa HOM05D005338 ORTHO05D006550 5.9e-102 374.4 218 87.6
Glyma.09G054300 Glycine max HOM05D005338 ORTHO05D006550 5.9e-102 374.4 218 87.2
Gohir.A11G203500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 7.8e-102 374.0 218 87.2
ClCG08G015430 Citrullus lanatus HOM05D005338 ORTHO05D006550 1.3e-101 373.2 218 87.2
CsaV3_2G028360 Cucumis sativus L. HOM05D005338 ORTHO05D006550 1.3e-101 373.2 218 87.2
Nn8g40744 Nelumbo nucifera HOM05D005338 ORTHO05D006550 1.3e-101 373.2 218 86.2
Solyc06g008010.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 2.3e-101 372.5 215 86.0
PGSC0003DMG400014704 Solanum tuberosum HOM05D005338 ORTHO05D006550 2.3e-101 372.5 215 86.0
Hma1.2p1_0471F.1_g159310 Hydrangea macrophylla HOM05D005338 ORTHO05D006550 3.9e-101 371.7 218 87.2
Gorai.003G040400 Gossypium raimondii HOM05D005338 ORTHO05D006550 5.0e-101 371.3 218 85.8
Sopen06g002850 Solanum pennellii HOM05D005338 ORTHO05D006550 5.0e-101 371.3 215 85.6
Eucgr.F01508 Eucalyptus grandis HOM05D005338 ORTHO05D006550 8.6e-101 370.5 218 86.2
Sed0010775 Sechium edule HOM05D005338 ORTHO05D006550 8.6e-101 370.5 218 86.2
Gohir.D03G039200 Gossypium hirsutum HOM05D005338 ORTHO05D006550 1.1e-100 370.2 218 85.8
COL.COLO4_27273 Corchorus olitorius HOM05D005338 ORTHO05D006550 1.9e-100 369.4 218 86.2
Gohir.A02G128500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 1.9e-100 369.4 218 85.3
Lalb_Chr15g0083931 Lupinus albus HOM05D005338 ORTHO05D006550 1.9e-100 369.4 211 88.6
Prupe.1G517500 Prunus persica HOM05D005338 ORTHO05D006550 2.5e-100 369.0 217 86.2
vmacro21598 Vaccinium macrocarpon HOM05D005338 ORTHO05D006550 3.3e-100 368.6 207 90.3
VMungo1309G1758 Vigna mungo HOM05D005338 ORTHO05D006550 3.3e-100 368.6 218 86.2
Phvul.009G240644 Phaseolus vulgaris HOM05D005338 ORTHO05D006550 4.3e-100 368.2 218 86.2
TWI74G1059 Tripterygium wilfordii HOM05D005338 ORTHO05D006550 5.6e-100 367.9 218 85.3
Prupe.1G518900 Prunus persica HOM05D005338 ORTHO05D006550 7.3e-100 367.5 217 86.2
EL10Ac3g06218 Beta vulgaris HOM05D005338 ORTHO05D006550 9.5e-100 367.1 218 84.4
Haze_25403 Corylus avellana HOM05D005338 ORTHO05D006550 1.6e-99 366.3 294 70.7
Glyma.18G135700 Glycine max HOM05D005338 ORTHO05D006550 1.6e-99 366.3 218 86.7
THA.LOC104824882 Tarenaya hassleriana HOM05D005338 ORTHO05D006550 1.6e-99 366.3 218 84.4
PGR083G0298 Punica granatum HOM05D005338 ORTHO05D006550 2.1e-99 365.9 218 84.9
CARHR113580 Cardamine hirsuta HOM05D005338 ORTHO05D006550 8.0e-99 364.0 218 83.5
Manes.13G095300 Manihot esculenta HOM05D005338 ORTHO05D006550 8.0e-99 364.0 220 85.5
Thecc.01G098200 Theobroma cacao HOM05D005338 ORTHO05D006550 1.0e-98 363.6 218 84.9
CANSAT56G3114 Cannabis sativa HOM05D005338 ORTHO05D006550 2.3e-98 362.5 218 83.9
Lj4g0021487 Lotus japonicus HOM05D005338 ORTHO05D006550 2.3e-98 362.5 218 84.9
DCAR_003287 Daucus carota HOM05D005338 ORTHO05D006550 3.1e-98 362.1 218 83.9
RcHm_v2.0_Chr5g0038311 Rosa chinensis HOM05D005338 ORTHO05D006550 4.0e-98 361.7 218 84.4
Psat1g148520 Pisum sativum HOM05D005338 ORTHO05D006550 5.2e-98 361.3 223 82.1
FvH4_5g37300 Fragaria vesca HOM05D005338 ORTHO05D006550 8.9e-98 360.5 215 84.7
FAN04G2403 Fragaria x ananassa HOM05D005338 ORTHO05D006550 8.9e-98 360.5 214 85.0
Hund12454 Selenicereus undatus HOM05D005338 ORTHO05D006550 1.5e-97 359.8 207 88.9
TPR.G29215 Trifolium pratense HOM05D005338 ORTHO05D006550 2.0e-97 359.4 207 87.9
FAN08G1597 Fragaria x ananassa HOM05D005338 ORTHO05D006550 2.6e-97 359.0 215 84.2
Peaxi162Scf00479g00910 Petunia axillaris HOM05D005338 ORTHO05D006550 2.6e-97 359.0 206 87.4
Medtr5g044730 Medicago truncatula HOM05D005338 ORTHO05D006550 1.7e-96 356.3 207 87.0
unitig_744.g23988 Utricularia gibba HOM05D005338 ORTHO05D006550 2.2e-96 355.9 215 86.5
AT2G22370 Arabidopsis thaliana HOM05D005338 ORTHO05D006550 2.9e-96 355.5 218 80.7
Aqoxy6G01960 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 3.7e-96 355.1 218 82.1
Lsat_1_v5_gn_1_19481 Lactuca sativa HOM05D005338 ORTHO05D006550 6.4e-96 354.4 204 88.7
PSO017G6030 Papaver somniferum HOM05D005338 ORTHO05D006550 8.3e-96 354.0 218 82.1
Thhalv10000318m.g Eutrema salsugineum HOM05D005338 ORTHO05D006550 1.4e-95 353.2 218 80.7
Gohir.D11G220100 Gossypium hirsutum HOM05D005338 ORTHO05D006550 1.9e-95 352.8 209 86.1
HanXRQChr04g0104391 Helianthus annuus HOM05D005338 ORTHO05D006550 1.9e-95 352.8 221 81.9
ECA247G2066 Erigeron canadensis HOM05D005338 ORTHO05D006550 3.2e-95 352.1 220 82.3
AL4G11870 Arabidopsis lyrata HOM05D005338 ORTHO05D006550 4.1e-95 351.7 218 80.3
Aqoxy1G02678 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 1.2e-94 350.1 218 80.7
Potri.007G095300 Populus trichocarpa HOM05D005338 ORTHO05D006550 1.2e-94 350.1 218 82.6
PSO170G4003 Papaver somniferum HOM05D005338 ORTHO05D006550 1.3e-93 346.7 218 81.2
Carub.0004s0155 Capsella rubella HOM05D005338 ORTHO05D006550 1.7e-93 346.3 218 78.9
FAN13G0739 Fragaria x ananassa HOM05D005338 ORTHO05D006550 2.3e-93 345.9 203 85.2
FAN18G4080 Fragaria x ananassa HOM05D005338 ORTHO05D006550 8.6e-93 344.0 202 85.1
BcaC02g08666 Brassica carinata HOM05D005338 ORTHO05D006550 1.5e-92 343.2 219 79.5
A04p16850 Brassica napus HOM05D005338 ORTHO05D006550 2.5e-92 342.4 219 79.5
BraA04t17318Z Brassica rapa HOM05D005338 ORTHO05D006550 2.5e-92 342.4 219 79.5
BcaC02g08711 Brassica carinata HOM05D005338 ORTHO05D006550 3.3e-92 342.0 219 79.5
C04p51430 Brassica napus HOM05D005338 ORTHO05D006550 3.3e-92 342.0 219 79.5
BolC4t26735H Brassica oleracea HOM05D005338 ORTHO05D006550 2.8e-91 339.0 219 79.0
MD15G1369800 Malus domestica HOM05D005338 ORTHO05D006550 2.8e-91 339.0 221 79.6
Sopen03g010490 Solanum pennellii HOM05D005338 ORTHO05D006550 3.1e-90 335.5 215 78.1
Sopen03g021660 Solanum pennellii HOM05D005338 ORTHO05D006550 8.9e-90 334.0 215 77.7
ATR0767G114 Amborella trichopoda HOM05D005338 ORTHO05D006550 1.5e-89 333.2 218 78.0
CDE07G0352 Ceratophyllum demersum HOM05D005338 ORTHO05D006550 3.4e-89 332.0 196 85.2
Sopen03g021630 Solanum pennellii HOM05D005338 ORTHO05D006550 5.8e-89 331.3 215 77.2
Sabra07G0078500 Salix brachista HOM05D005338 ORTHO05D006550 7.5e-89 330.9 211 78.7
Zm00001eb236490 Zea mays HOM05D005338 ORTHO05D006550 5.4e-87 324.7 202 78.7
Dinv36026 Davidia involucrata HOM05D005338 ORTHO05D006550 1.2e-86 323.6 215 78.1
Os02g0193900 Oryza sativa ssp. japonica HOM05D005338 ORTHO05D006550 4.6e-86 321.6 203 77.3
HPP92_021909 Vanilla planifolia HOM05D005338 ORTHO05D006550 6.0e-86 321.2 211 73.9
Sp4g01410 Schrenkiella parvula HOM05D005338 ORTHO05D006550 7.8e-86 320.9 218 73.9
Aa31LG7G14440 Aethionema arabicum HOM05D005338 ORTHO05D006550 1.0e-85 320.5 277 61.7
Rhsim06G0038600 Rhododendron simsii HOM05D005338 ORTHO05D006550 3.4e-81 305.4 185 85.9
CAN.G176.23 Capsicum annuum HOM05D005338 ORTHO05D006550 5.8e-81 304.7 185 82.2
MELO3C010912.2 Cucumis melo HOM05D005338 ORTHO05D006550 1.6e-78 296.6 174 87.4
Ca_02026_v3 Cicer arietinum L. HOM05D005338 ORTHO05D006550 2.5e-76 289.3 164 87.8
SHI19279 Sapria himalayana HOM05D005338 ORTHO05D006550 3.3e-76 288.9 201 75.1
Lj4A782T79 Lonicera japonica HOM05D005338 ORTHO05D006550 2.1e-75 286.2 173 82.1
Mapoly0023s0045 Marchantia polymorpha HOM05D005338 ORTHO05D006550 6.4e-72 274.6 210 65.2
Pp3c14_750 Physcomitrium patens HOM05D005338 ORTHO05D006550 2.4e-71 272.7 219 59.4
SMO236G0045 Selaginella moellendorffii HOM05D005338 ORTHO05D006550 2.1e-70 269.6 210 64.3
SalBow1G1231 Salvia bowleyana HOM05D005338 ORTHO05D006550 1.1e-68 263.8 218 68.8
TAR628G0003 Trochodendron aralioides HOM05D005338 ORTHO05D006550 1.9e-63 246.5 145 87.6
AagrBONN_evm.TU.Sc2ySwM_362.1720 Anthoceros agrestis HOM05D005338 ORTHO05D006550 3.0e-61 239.2 210 57.6
AUR62040070 Chenopodium quinoa HOM05D005338 ORTHO05D006550 3.0e-61 239.2 139 84.9
Solyc03g046360.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 1.5e-60 236.9 212 61.8
RcHm_v2.0_Chr7g0238911 Rosa chinensis HOM05D005338 ORTHO05D006550 1.8e-58 229.9 176 72.2
Sc15g0006680 Simmondsia chinensis HOM05D005338 ORTHO05D006550 3.1e-58 229.2 145 82.8
Hma1.2p1_0023F.1_g015170 Hydrangea macrophylla HOM05D005338 ORTHO05D006550 6.0e-54 214.9 148 79.1
Sopen00g011030 Solanum pennellii HOM05D005338 ORTHO05D006550 8.1e-51 204.5 215 54.4
RcHm_v2.0_Chr5g0034471 Rosa chinensis HOM05D005338 ORTHO05D006550 3.4e-49 199.1 119 84.9
Sopen00g003620 Solanum pennellii HOM05D005338 ORTHO05D006550 5.5e-47 191.8 174 59.8
RcHm_v2.0_Chr7g0238871 Rosa chinensis HOM05D005338 ORTHO05D006550 1.6e-46 190.3 110 81.8
SMO236G0041 Selaginella moellendorffii HOM05D005338 ORTHO05D006550 9.6e-44 181.0 162 56.8
Sopen03g021680 Solanum pennellii HOM05D005338 ORTHO05D006550 8.5e-40 167.9 215 48.4
TPR.G5804 Trifolium pratense HOM05D005338 ORTHO05D006550 4.1e-34 149.1 84 91.7
RcHm_v2.0_Chr7g0238881 Rosa chinensis HOM05D005338 ORTHO05D006550 5.3e-34 148.7 91 87.9
Atru.chr1.3597 Acer truncatum HOM05D005338 ORTHO05D006550 1.0e-24 117.9 81 76.5
BcaC04g23293 Brassica carinata HOM05D005338 ORTHO05D006550 9.1e-18 94.7 56 78.6
Atru.chr12.488 Acer truncatum HOM05D005338 ORTHO05D006550 6.5e-16 88.6 45 91.1
SEGI_27973 Sequoiadendron giganteum HOM05D005338 ORTHO05D006550 1.5e-15 87.4 53 73.6
TAR628G1182 Trochodendron aralioides HOM05D005338 ORTHO05D006550 3.2e-15 86.3 46 87.0
BraA09t41155Z Brassica rapa HOM05D005338 ORTHO05D006550 7.2e-15 85.1 66 72.7
MD08G1183200 Malus domestica HOM05D005338 ORTHO05D006550 9.7e-12 74.7 99 49.5
C08p40830 Brassica napus HOM05D005338 ORTHO05D006550 1.5e-07 60.8 33 87.9
BolC8t51648H Brassica oleracea HOM05D005338 ORTHO05D006550 4.2e-07 59.3 33 87.9


User provided reference genes

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