Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G066700 Carya illinoinensis HOM05D003810 ORTHO05D004416 9.4e-130 466.8 233 100.0
CiPaw.11G208700 Carya illinoinensis HOM05D003810 ORTHO05D004416 8.3e-110 400.6 211 95.3
Cfa016940 Carpinus fangiana HOM05D003810 ORTHO05D004416 1.2e-87 327.0 219 76.3
Haze_09895 Corylus avellana HOM05D003810 ORTHO05D004416 5.2e-80 301.6 203 75.9
QL08p001596 Quercus lobata HOM05D003810 ORTHO05D004416 2.4e-77 292.7 228 67.1
MELO3C020474.2 Cucumis melo HOM05D003810 ORTHO05D004416 2.5e-74 282.7 211 66.8
CsaV3_4G027560 Cucumis sativus L. HOM05D003810 ORTHO05D004416 4.7e-73 278.5 211 65.9
Sed0019869 Sechium edule HOM05D003810 ORTHO05D004416 1.1e-72 277.3 211 64.9
CANSAT11G0157 Cannabis sativa HOM05D003810 ORTHO05D004416 6.9e-72 274.6 217 65.0
ClCG04G003010 Citrullus lanatus HOM05D003810 ORTHO05D004416 3.2e-69 265.8 201 66.2
Prupe.1G583500 Prunus persica HOM05D003810 ORTHO05D004416 1.7e-67 260.0 223 61.0
MD15G1441400 Malus domestica HOM05D003810 ORTHO05D004416 1.5e-66 256.9 209 63.2
RcHm_v2.0_Chr7g0221221 Rosa chinensis HOM05D003810 ORTHO05D004416 1.5e-66 256.9 213 61.0
Duzib150G1314 Durio zibethinus HOM05D003810 ORTHO05D004416 6.2e-65 251.5 211 60.7
Eucgr.J01409 Eucalyptus grandis HOM05D003810 ORTHO05D004416 6.2e-65 251.5 211 59.7
Thecc.09G267400 Theobroma cacao HOM05D003810 ORTHO05D004416 5.3e-64 248.4 211 60.7
Gohir.A07G114448 Gossypium hirsutum HOM05D003810 ORTHO05D004416 1.5e-63 246.9 211 60.2
FvH4_5g28910 Fragaria vesca HOM05D003810 ORTHO05D004416 2.0e-63 246.5 208 59.6
Gorai.001G127200 Gossypium raimondii HOM05D003810 ORTHO05D004416 2.0e-63 246.5 211 60.2
Gohir.D07G118250 Gossypium hirsutum HOM05D003810 ORTHO05D004416 2.6e-63 246.1 211 60.2
GSVIVG01014785001 Vitis vinifera HOM05D003810 ORTHO05D004416 2.6e-63 246.1 208 60.6
Atru.chr2.3847 Acer truncatum HOM05D003810 ORTHO05D004416 7.6e-63 244.6 211 59.2
Dinv40895 Davidia involucrata HOM05D003810 ORTHO05D004416 9.9e-63 244.2 211 57.8
Lj3A773G17 Lonicera japonica HOM05D003810 ORTHO05D004416 2.2e-62 243.0 213 56.8
Lj3C711T10 Lonicera japonica HOM05D003810 ORTHO05D004416 8.4e-62 241.1 211 57.8
Hma1.2p1_0193F.1_g084130 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 1.2e-60 237.3 223 55.6
Atru.chr12.1053 Acer truncatum HOM05D003810 ORTHO05D004416 1.6e-60 236.9 211 58.8
Sc14g0003560 Simmondsia chinensis HOM05D003810 ORTHO05D004416 3.0e-59 232.6 206 57.3
Medtr1g090110 Medicago truncatula HOM05D003810 ORTHO05D004416 6.7e-59 231.5 208 58.2
COL.COLO4_25217 Corchorus olitorius HOM05D003810 ORTHO05D004416 1.1e-58 230.7 207 58.5
CSS0024914 Camellia sinensis var. sinensis HOM05D003810 ORTHO05D004416 1.9e-58 229.9 212 55.7
Ca_10408_v3 Cicer arietinum L. HOM05D003810 ORTHO05D004416 1.9e-58 229.9 209 58.9
TPR.G13386 Trifolium pratense HOM05D003810 ORTHO05D004416 1.9e-58 229.9 209 57.4
Ciclev10007802m.g Citrus clementina HOM05D003810 ORTHO05D004416 3.3e-58 229.2 204 58.8
TAR627G1185 Trochodendron aralioides HOM05D003810 ORTHO05D004416 4.3e-58 228.8 220 55.0
FvH4_6g25000 Fragaria vesca HOM05D003810 ORTHO05D004416 7.4e-58 228.0 209 56.5
HanXRQChr05g0160211 Helianthus annuus HOM05D003810 ORTHO05D004416 9.6e-58 227.6 211 54.5
Lj5g0018758 Lotus japonicus HOM05D003810 ORTHO05D004416 1.3e-57 227.3 211 58.3
FAN04G0096 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.6e-57 226.9 208 57.2
Psat6g170400 Pisum sativum HOM05D003810 ORTHO05D004416 1.6e-57 226.9 212 57.1
Rhsim04G0009500 Rhododendron simsii HOM05D003810 ORTHO05D004416 1.6e-57 226.9 208 54.8
Glyma.10G193000 Glycine max HOM05D003810 ORTHO05D004416 4.8e-57 225.3 211 56.4
Nitab4.5_0001622g0070 Nicotiana tabacum HOM05D003810 ORTHO05D004416 8.1e-57 224.6 206 54.4
Nn2g14662 Nelumbo nucifera HOM05D003810 ORTHO05D004416 1.1e-56 224.2 220 56.4
PGR042G2745 Punica granatum HOM05D003810 ORTHO05D004416 1.8e-56 223.4 213 52.1
MBI15_g00877_MAGBIO Magnolia biondii HOM05D003810 ORTHO05D004416 2.4e-56 223.0 209 56.5
Glyma.20G197500 Glycine max HOM05D003810 ORTHO05D004416 5.3e-56 221.9 211 55.5
TWI23G0485 Tripterygium wilfordii HOM05D003810 ORTHO05D004416 5.3e-56 221.9 215 53.5
CDE04G2581 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 6.9e-56 221.5 212 57.1
Lalb_Chr06g0169761 Lupinus albus HOM05D003810 ORTHO05D004416 6.9e-56 221.5 210 56.2
MSTRG.13036 Avicennia marina HOM05D003810 ORTHO05D004416 1.5e-55 220.3 214 54.2
CAN.G492.44 Capsicum annuum HOM05D003810 ORTHO05D004416 2.6e-55 219.5 206 53.4
Cpa.g.sc181.12 Carica papaya HOM05D003810 ORTHO05D004416 2.6e-55 219.5 179 60.3
Nitab4.5_0000611g0250 Nicotiana tabacum HOM05D003810 ORTHO05D004416 2.6e-55 219.5 206 53.4
VMungo0720G2836 Vigna mungo HOM05D003810 ORTHO05D004416 5.8e-55 218.4 211 55.0
Cc00_g20590 Coffea canephora HOM05D003810 ORTHO05D004416 7.6e-55 218.0 206 53.4
Migut.H01729 Erythranthe guttata HOM05D003810 ORTHO05D004416 9.9e-55 217.6 214 54.2
Phvul.007G134900 Phaseolus vulgaris HOM05D003810 ORTHO05D004416 2.2e-54 216.5 211 54.0
DCAR_017597 Daucus carota HOM05D003810 ORTHO05D004416 6.4e-54 214.9 211 51.7
Medtr6g071555 Medicago truncatula HOM05D003810 ORTHO05D004416 2.4e-53 213.0 209 56.0
Solyc10g005900.3 Solanum lycopersicum HOM05D003810 ORTHO05D004416 3.2e-53 212.6 206 51.9
Sopen10g001850 Solanum pennellii HOM05D003810 ORTHO05D004416 3.2e-53 212.6 206 51.9
Peaxi162Scf00212g00616 Petunia axillaris HOM05D003810 ORTHO05D004416 7.1e-53 211.5 210 50.5
FAN14G4445 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.6e-52 210.3 241 48.5
Potri.005G061432 Populus trichocarpa HOM05D003810 ORTHO05D004416 2.7e-52 209.5 208 52.4
Prupe.5G213500 Prunus persica HOM05D003810 ORTHO05D004416 2.7e-52 209.5 206 54.9
Aqoxy3G00950 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 4.6e-52 208.8 220 54.5
Potri.007G107400 Populus trichocarpa HOM05D003810 ORTHO05D004416 4.6e-52 208.8 208 52.4
THA.LOC104815683 Tarenaya hassleriana HOM05D003810 ORTHO05D004416 1.8e-51 206.8 211 50.2
vmacro09609 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 1.8e-51 206.8 263 45.2
vmacro22299 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 1.8e-51 206.8 263 45.2
arahy.Tifrunner.gnm1.ann1.KKS8QY Arachis hypogaea HOM05D003810 ORTHO05D004416 3.0e-51 206.1 199 54.3
FAN08G2973 Fragaria x ananassa HOM05D003810 ORTHO05D004416 6.7e-51 204.9 208 53.8
ECA246G2898 Erigeron canadensis HOM05D003810 ORTHO05D004416 4.3e-50 202.2 211 46.9
Prupe.5G046900 Prunus persica HOM05D003810 ORTHO05D004416 5.6e-50 201.8 209 53.1
ATR0751G036 Amborella trichopoda HOM05D003810 ORTHO05D004416 7.4e-50 201.4 218 50.9
CARHR045410 Cardamine hirsuta HOM05D003810 ORTHO05D004416 2.8e-49 199.5 204 50.0
Oeu062684.4 Olea europaea HOM05D003810 ORTHO05D004416 2.8e-49 199.5 228 48.2
Os08g0338200 Oryza sativa ssp. japonica HOM05D003810 ORTHO05D004416 2.8e-49 199.5 211 52.6
AL1G63840 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 3.7e-49 199.1 204 51.0
EL10Ac9g22878 Beta vulgaris HOM05D003810 ORTHO05D004416 3.7e-49 199.1 213 51.2
PSO063G0853 Papaver somniferum HOM05D003810 ORTHO05D004416 3.7e-49 199.1 218 50.0
Thhalv10011333m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 4.8e-49 198.7 204 50.5
PSO782G5597 Papaver somniferum HOM05D003810 ORTHO05D004416 1.4e-48 197.2 218 49.5
Hma1.2p1_2995F.1_g331430 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 1.8e-48 196.8 197 54.8
AT3G61420 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 4.0e-48 195.7 204 51.5
Actinidia00838 Actinidia chinensis HOM05D003810 ORTHO05D004416 9.0e-48 194.5 167 59.3
AUR62017624 Chenopodium quinoa HOM05D003810 ORTHO05D004416 9.0e-48 194.5 193 56.5
AT1G55750 Arabidopsis thaliana HOM05D003810 ORTHO05D004416 1.2e-47 194.1 204 50.0
BcaB05g24435 Brassica carinata HOM05D003810 ORTHO05D004416 1.5e-47 193.7 203 49.3
AUR62015172 Chenopodium quinoa HOM05D003810 ORTHO05D004416 1.5e-47 193.7 193 56.5
AL5G43720 Arabidopsis lyrata HOM05D003810 ORTHO05D004416 3.4e-47 192.6 204 50.0
Aa31LG10G490 Aethionema arabicum HOM05D003810 ORTHO05D004416 4.5e-47 192.2 204 49.5
Lj1A897G41 Lonicera japonica HOM05D003810 ORTHO05D004416 5.8e-47 191.8 211 47.9
Zm00001eb172700 Zea mays HOM05D003810 ORTHO05D004416 5.8e-47 191.8 208 50.0
FAN18G3759 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.3e-46 190.7 331 37.5
Carub.0001s4426 Capsella rubella HOM05D003810 ORTHO05D004416 2.2e-46 189.9 204 49.0
Sp5g24310 Schrenkiella parvula HOM05D003810 ORTHO05D004416 4.9e-46 188.7 203 47.8
Sabra07G0088100 Salix brachista HOM05D003810 ORTHO05D004416 3.2e-45 186.0 247 43.7
BcaC03g15064 Brassica carinata HOM05D003810 ORTHO05D004416 9.3e-45 184.5 203 47.8
C02p26210 Brassica napus HOM05D003810 ORTHO05D004416 9.3e-45 184.5 203 47.8
BolC2t08687H Brassica oleracea HOM05D003810 ORTHO05D004416 9.3e-45 184.5 203 47.8
HPP92_028601 Vanilla planifolia HOM05D003810 ORTHO05D004416 4.6e-44 182.2 202 51.5
BraA02t06637Z Brassica rapa HOM05D003810 ORTHO05D004416 6.0e-44 181.8 203 47.3
Lsat_1_v5_gn_1_66020 Lactuca sativa HOM05D003810 ORTHO05D004416 1.0e-43 181.0 215 48.4
A02p15760 Brassica napus HOM05D003810 ORTHO05D004416 3.0e-43 179.5 203 46.8
Manes.02G224100 Manihot esculenta HOM05D003810 ORTHO05D004416 1.3e-41 174.1 154 59.1
Aqoxy2G00893 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 2.2e-41 173.3 220 48.6
TAR629G3163 Trochodendron aralioides HOM05D003810 ORTHO05D004416 6.9e-40 168.3 214 46.7
arahy.Tifrunner.gnm1.ann1.60T2A8 Arachis hypogaea HOM05D003810 ORTHO05D004416 1.5e-39 167.2 163 54.6
SGA_v2.0_scaffold146G36126 Striga asiatica HOM05D003810 ORTHO05D004416 5.9e-39 165.2 184 47.8
AagrBONN_evm.TU.Sc2ySwM_117.3105 Anthoceros agrestis HOM05D003810 ORTHO05D004416 2.5e-37 159.8 214 42.5
QL04p000617 Quercus lobata HOM05D003810 ORTHO05D004416 2.7e-36 156.4 114 72.8
FAN02G2818 Fragaria x ananassa HOM05D003810 ORTHO05D004416 2.3e-35 153.3 206 45.1
Actinidia03659 Actinidia chinensis HOM05D003810 ORTHO05D004416 1.1e-34 151.0 135 57.8
Pp3c26_14480 Physcomitrium patens HOM05D003810 ORTHO05D004416 1.5e-34 150.6 213 41.8
Ah.01g013210 Amaranthus hybridus HOM05D003810 ORTHO05D004416 1.9e-34 150.2 211 43.6
unitig_61.g26129 Utricularia gibba HOM05D003810 ORTHO05D004416 2.8e-33 146.4 211 40.3
Mapoly0009s0093 Marchantia polymorpha HOM05D003810 ORTHO05D004416 3.4e-31 139.4 227 37.9
FAN02G0111 Fragaria x ananassa HOM05D003810 ORTHO05D004416 5.9e-31 138.7 129 57.4
Oeu005536.2 Olea europaea HOM05D003810 ORTHO05D004416 7.2e-29 131.7 164 45.1
BcaB07g33855 Brassica carinata HOM05D003810 ORTHO05D004416 4.7e-28 129.0 183 41.5
Hund17709 Selenicereus undatus HOM05D003810 ORTHO05D004416 1.2e-23 114.4 206 36.9
SGA_v2.0_scaffold42G15939 Striga asiatica HOM05D003810 ORTHO05D004416 2.6e-23 113.2 237 31.6
Aqoxy7G03331 Aquilegia oxysepala HOM05D003810 ORTHO05D004416 1.3e-22 110.9 108 55.6
FAN02G0356 Fragaria x ananassa HOM05D003810 ORTHO05D004416 1.7e-22 110.5 73 72.6
MD08G1246300 Malus domestica HOM05D003810 ORTHO05D004416 2.2e-22 110.2 75 70.7
SMO228G0023 Selaginella moellendorffii HOM05D003810 ORTHO05D004416 2.5e-21 106.7 214 34.6
CAN.G306.2 Capsicum annuum HOM05D003810 ORTHO05D004416 5.5e-21 105.5 106 52.8
CAN.G306.3 Capsicum annuum HOM05D003810 ORTHO05D004416 5.5e-21 105.5 106 52.8
FAN05G0299 Fragaria x ananassa HOM05D003810 ORTHO05D010162 1.2e-20 104.4 111 53.2
Dinv10375 Davidia involucrata HOM05D003810 ORTHO05D004416 2.6e-18 96.7 224 32.6
Hund08475 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.8e-16 90.5 58 75.9
SHI21694 Sapria himalayana HOM05D003810 ORTHO05D004416 2.4e-16 90.1 69 66.7
Lsat_1_v5_gn_9_33460 Lactuca sativa HOM05D003810 ORTHO05D004416 5.3e-16 89.0 77 58.4
SHI21692 Sapria himalayana HOM05D003810 ORTHO05D004416 2.0e-15 87.0 152 36.8
CDE07G1690 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 2.5e-13 80.1 133 40.6
MD08G1246200 Malus domestica HOM05D003810 ORTHO05D004416 5.5e-13 79.0 144 39.6
BcaC08g42928 Brassica carinata HOM05D003810 ORTHO05D004416 3.6e-12 76.3 93 47.3
Thhalv10011448m.g Eutrema salsugineum HOM05D003810 ORTHO05D004416 6.1e-12 75.5 117 41.0
CBR_g28523 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-11 73.9 92 41.3
Lsat_1_v5_gn_2_75840 Lactuca sativa HOM05D001134 ORTHO05D004416 9.1e-08 61.6 133 34.6
Rhsim05G0134800 Rhododendron simsii HOM05D003492 ORTHO05D005115 9.1e-08 61.6 98 43.9
Mapoly0063s0044 Marchantia polymorpha HOM05D003810 ORTHO05D004416 1.7e-06 57.4 64 48.4
CAN.G1034.2 Capsicum annuum HOM05D000222 ORTHO05D011077 5.0e-06 55.8 116 33.6


User provided reference genes

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