Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.14G033400 Carya illinoinensis HOM05D005598 ORTHO05D006587 4.4e-118 427.9 213 100.0
CiPaw.13G040600 Carya illinoinensis HOM05D005598 ORTHO05D006587 6.3e-72 274.6 258 62.4
QL04p046731 Quercus lobata HOM05D005598 ORTHO05D006587 3.1e-71 272.3 258 62.4
MD02G1261600 Malus domestica HOM05D005598 ORTHO05D006587 2.9e-69 265.8 258 60.9
Haze_03295 Corylus avellana HOM05D005598 ORTHO05D006587 1.4e-68 263.5 269 60.6
TAR636G1340 Trochodendron aralioides HOM05D005598 ORTHO05D006587 9.4e-68 260.8 258 60.5
CSS0000091 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 3.6e-67 258.8 258 60.1
RcHm_v2.0_Chr5g0049931 Rosa chinensis HOM05D005598 ORTHO05D006587 3.6e-67 258.8 257 59.5
GSVIVG01010722001 Vitis vinifera HOM05D005598 ORTHO05D006587 3.6e-67 258.8 258 59.7
Lj2C33T4 Lonicera japonica HOM05D005598 ORTHO05D006587 6.1e-67 258.1 258 60.9
FvH4_3g27560 Fragaria vesca HOM05D005598 ORTHO05D006587 8.8e-66 254.2 257 59.5
PGR142G4231 Punica granatum HOM05D005598 ORTHO05D006587 8.8e-66 254.2 262 59.5
Rhsim09G0141700 Rhododendron simsii HOM05D005598 ORTHO05D006587 8.8e-66 254.2 258 59.3
Atru.chr12.1043 Acer truncatum HOM05D005598 ORTHO05D006587 2.0e-65 253.1 258 58.5
FAN16G3025 Fragaria x ananassa HOM05D005598 ORTHO05D006587 2.5e-65 252.7 255 58.8
Dinv11826 Davidia involucrata HOM05D005598 ORTHO05D006587 3.3e-65 252.3 255 60.0
Duzib128G1802 Durio zibethinus HOM05D005598 ORTHO05D006587 3.3e-65 252.3 256 57.0
FAN11G2626 Fragaria x ananassa HOM05D005598 ORTHO05D006587 3.3e-65 252.3 257 59.1
Nn6g34854 Nelumbo nucifera HOM05D005598 ORTHO05D006587 9.7e-65 250.8 258 58.9
Hund06785 Selenicereus undatus HOM05D005598 ORTHO05D006587 1.3e-64 250.4 259 57.9
CDE08G1414 Ceratophyllum demersum HOM05D005598 ORTHO05D006587 1.7e-64 250.0 256 56.6
Potri.008G019800 Populus trichocarpa HOM05D005598 ORTHO05D006587 2.2e-64 249.6 258 58.5
MSTRG.23901 Avicennia marina HOM05D005598 ORTHO05D006587 2.8e-64 249.2 257 56.4
Cc02_g09610 Coffea canephora HOM05D005598 ORTHO05D006587 8.2e-64 247.7 258 57.8
Eucgr.G02689 Eucalyptus grandis HOM05D005598 ORTHO05D006587 1.1e-63 247.3 258 57.0
CsaV3_4G003460 Cucumis sativus L. HOM05D005598 ORTHO05D006587 2.4e-63 246.1 258 57.0
Gohir.D05G288900 Gossypium hirsutum HOM05D005598 ORTHO05D006587 2.4e-63 246.1 258 56.2
CANSAT56G2222 Cannabis sativa HOM05D005598 ORTHO05D006587 3.1e-63 245.7 257 57.6
Gorai.009G304000 Gossypium raimondii HOM05D005598 ORTHO05D006587 3.1e-63 245.7 258 56.6
Ciclev10016103m.g Citrus clementina HOM05D005598 ORTHO05D006587 1.2e-62 243.8 258 55.8
Gohir.A05G287700 Gossypium hirsutum HOM05D005598 ORTHO05D006587 1.5e-62 243.4 258 55.8
Ca_25662_v3 Cicer arietinum L. HOM05D005598 ORTHO05D006587 2.6e-62 242.7 259 56.4
ATR0820G296 Amborella trichopoda HOM05D005598 ORTHO05D006587 4.5e-62 241.9 258 56.2
Sabra08G0013100 Salix brachista HOM05D005598 ORTHO05D006587 4.5e-62 241.9 259 57.1
Thecc.10G109100 Theobroma cacao HOM05D005598 ORTHO05D006587 5.9e-62 241.5 257 55.3
TWI38G0756 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 5.9e-62 241.5 257 56.4
Lalb_Chr02g0146251 Lupinus albus HOM05D005598 ORTHO05D006587 7.7e-62 241.1 258 56.6
Migut.F01603 Erythranthe guttata HOM05D005598 ORTHO05D006587 1.0e-61 240.7 257 54.9
Sc09g0005330 Simmondsia chinensis HOM05D005598 ORTHO05D006587 1.0e-61 240.7 258 56.2
MELO3C017716.2 Cucumis melo HOM05D005598 ORTHO05D006587 1.7e-61 240.0 258 55.8
VMungo0720G0111 Vigna mungo HOM05D005598 ORTHO05D006587 1.7e-61 240.0 260 53.8
Oeu024809.1 Olea europaea HOM05D005598 ORTHO05D006587 2.2e-61 239.6 291 50.9
AUR62042081 Chenopodium quinoa HOM05D005598 ORTHO05D006587 2.9e-61 239.2 259 54.8
Lj5g0018811 Lotus japonicus HOM05D005598 ORTHO05D006587 5.0e-61 238.4 258 57.0
Phvul.007G022800 Phaseolus vulgaris HOM05D005598 ORTHO05D006587 6.5e-61 238.0 261 54.0
SalBow6G5745 Salvia bowleyana HOM05D005598 ORTHO05D006587 6.5e-61 238.0 256 54.3
ClCG07G015650 Citrullus lanatus HOM05D005598 ORTHO05D006587 8.5e-61 237.7 289 50.9
Medtr1g111980 Medicago truncatula HOM05D005598 ORTHO05D006587 1.1e-60 237.3 258 55.0
EL10Ac4g08688 Beta vulgaris HOM05D005598 ORTHO05D006587 1.4e-60 236.9 259 54.4
PSO339G6152 Papaver somniferum HOM05D005598 ORTHO05D006587 1.4e-60 236.9 258 55.8
Sed0022725 Sechium edule HOM05D005598 ORTHO05D006587 1.4e-60 236.9 258 54.3
Glyma.10G278500 Glycine max HOM05D005598 ORTHO05D006587 4.2e-60 235.3 260 54.6
arahy.Tifrunner.gnm1.ann1.8DLZ0X Arachis hypogaea HOM05D005598 ORTHO05D006587 5.5e-60 235.0 258 53.1
Lsat_1_v5_gn_2_104400 Lactuca sativa HOM05D005598 ORTHO05D006587 5.5e-60 235.0 258 54.7
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 7.2e-60 234.6 251 55.4
HanXRQChr11g0342091 Helianthus annuus HOM05D005598 ORTHO05D006587 1.2e-59 233.8 258 55.4
TPR.G2473 Trifolium pratense HOM05D005598 ORTHO05D006587 1.2e-59 233.8 257 53.7
THA.LOC104824207 Tarenaya hassleriana HOM05D005598 ORTHO05D006587 2.1e-59 233.0 259 54.1
Aqoxy4G02744 Aquilegia oxysepala HOM05D005598 ORTHO05D006587 2.7e-59 232.6 256 53.9
arahy.Tifrunner.gnm1.ann1.L8YGTT Arachis hypogaea HOM05D005598 ORTHO05D006587 2.7e-59 232.6 259 52.1
Manes.10G062100 Manihot esculenta HOM05D005598 ORTHO05D006587 1.4e-58 230.3 248 55.6
DCAR_006354 Daucus carota HOM05D005598 ORTHO05D006587 1.8e-58 229.9 258 55.0
Peaxi162Scf00173g00110 Petunia axillaris HOM05D005598 ORTHO05D006587 1.8e-58 229.9 258 54.3
CAN.G645.19 Capsicum annuum HOM05D005598 ORTHO05D006587 2.3e-58 229.6 257 53.3
HPP92_000055 Vanilla planifolia HOM05D005598 ORTHO05D006587 2.3e-58 229.6 258 53.9
Nitab4.5_0003590g0030 Nicotiana tabacum HOM05D005598 ORTHO05D006587 3.0e-58 229.2 258 54.3
Os11g0153900 Oryza sativa ssp. japonica HOM05D005598 ORTHO05D006587 6.7e-58 228.0 258 52.7
CSS0039611 Camellia sinensis var. sinensis HOM05D005598 ORTHO05D006587 5.7e-57 224.9 265 53.6
Sopen11g002760 Solanum pennellii HOM05D005598 ORTHO05D006587 5.7e-57 224.9 258 53.1
Solyc11g006860.2 Solanum lycopersicum HOM05D005598 ORTHO05D006587 1.3e-56 223.8 258 53.1
vmacro10312 Vaccinium macrocarpon HOM05D005598 ORTHO05D006587 1.3e-56 223.8 256 53.9
PGSC0003DMG400023970 Solanum tuberosum HOM05D005598 ORTHO05D006587 2.2e-56 223.0 258 52.7
MBI01_g02157_MAGBIO Magnolia biondii HOM05D005598 ORTHO05D006587 3.7e-56 222.2 250 52.8
Zm00001eb406890 Zea mays HOM05D005598 ORTHO05D006587 4.8e-56 221.9 258 51.2
Aa31LG7G12150 Aethionema arabicum HOM05D005598 ORTHO05D006587 8.2e-56 221.1 262 51.5
ECA238G1649 Erigeron canadensis HOM05D005598 ORTHO05D006587 1.4e-55 220.3 259 52.1
AT2G25100 Arabidopsis thaliana HOM05D005598 ORTHO05D006587 1.2e-54 217.2 257 50.2
Carub.0004s0468 Capsella rubella HOM05D005598 ORTHO05D006587 1.6e-54 216.9 262 50.4
A04p19500 Brassica napus HOM05D005598 ORTHO05D006587 2.0e-54 216.5 263 52.1
BcaC02g08374 Brassica carinata HOM05D005598 ORTHO05D006587 2.6e-54 216.1 263 52.1
C04p55060 Brassica napus HOM05D005598 ORTHO05D006587 2.6e-54 216.1 263 52.1
BolC4t27046H Brassica oleracea HOM05D005598 ORTHO05D006587 2.6e-54 216.1 263 52.1
BraA04t17544Z Brassica rapa HOM05D005598 ORTHO05D006587 2.6e-54 216.1 263 52.1
Sp4g04110 Schrenkiella parvula HOM05D005598 ORTHO05D006587 4.5e-54 215.3 262 52.3
BcaB06g28035 Brassica carinata HOM05D005598 ORTHO05D006587 1.3e-53 213.8 258 51.9
TWI63G1098 Tripterygium wilfordii HOM05D005598 ORTHO05D006587 1.7e-53 213.4 254 53.5
CARHR116600 Cardamine hirsuta HOM05D005598 ORTHO05D006587 3.8e-53 212.2 262 50.8
SGA_v2.0_scaffold62G21319 Striga asiatica HOM05D005598 ORTHO05D006587 1.5e-52 210.3 244 51.6
Nitab4.5_0002586g0090 Nicotiana tabacum HOM05D005598 ORTHO05D006587 7.2e-52 208.0 293 47.4
SEGI_12354 Sequoiadendron giganteum HOM05D005598 ORTHO05D006587 1.2e-51 207.2 257 48.2
Actinidia34728 Actinidia chinensis HOM05D005598 ORTHO05D006587 2.7e-51 206.1 219 57.5
Thhalv10000575m.g Eutrema salsugineum HOM05D005598 ORTHO05D006587 8.8e-50 201.1 254 49.6
Prupe.2G069600 Prunus persica HOM05D005598 ORTHO05D006587 2.0e-49 199.9 207 58.5
unitig_736.g22318 Utricularia gibba HOM05D005598 ORTHO05D006587 5.7e-49 198.4 259 48.6
Dinv10930 Davidia involucrata HOM05D005598 ORTHO05D006587 7.5e-49 198.0 209 57.4
Cpa.g.c34135 Carica papaya HOM05D005598 ORTHO05D006587 7.7e-46 188.0 208 54.8
PSO801G0206 Papaver somniferum HOM05D005598 ORTHO05D006587 1.9e-44 183.3 207 54.6
AL4G16260 Arabidopsis lyrata HOM05D005598 ORTHO05D006587 1.5e-41 173.7 184 53.8
DCAR_006363 Daucus carota HOM05D005598 ORTHO05D006587 9.8e-41 171.0 203 55.2
AagrBONN_evm.TU.Sc2ySwM_362.477 Anthoceros agrestis HOM05D005598 ORTHO05D006587 8.5e-37 157.9 258 40.7
Mapoly0006s0052 Marchantia polymorpha HOM05D005598 ORTHO05D006587 1.5e-36 157.1 217 44.7
AUR62041514 Chenopodium quinoa HOM05D005598 ORTHO05D006587 7.2e-36 154.8 165 54.5
Psat0s4121g0080 Pisum sativum HOM05D005598 ORTHO05D006587 6.1e-35 151.8 206 48.1
Pp3c13_7860 Physcomitrium patens HOM05D005598 ORTHO05D006587 1.4e-31 140.6 224 41.1
Lalb_Chr21g0309151 Lupinus albus HOM05D005598 ORTHO05D006587 1.2e-25 120.9 110 62.7
SMO347G0320 Selaginella moellendorffii HOM05D005598 ORTHO05D006587 2.6e-25 119.8 252 37.7
CBR_g29781 Chara braunii HOM05D005598 ORTHO05D006587 1.7e-21 107.1 106 56.6
Cre17.g701350 Chlamydomonas reinhardtii HOM05D005598 ORTHO05D006587 6.8e-18 95.1 259 30.9
Ah.04g160180 Amaranthus hybridus HOM05D005598 ORTHO05D006587 1.3e-16 90.9 95 55.8
Zm00001eb407010 Zea mays HOM05D005598 ORTHO05D006587 9.2e-15 84.7 68 66.2
Haze_26455 Corylus avellana HOM05D005598 ORTHO05D006587 1.0e-13 81.3 191 30.9
MD02G1261400 Malus domestica HOM05D005598 ORTHO05D006587 1.9e-12 77.0 121 43.0
Lsat_1_v5_gn_9_94660 Lactuca sativa HOM05D005598 ORTHO05D006587 2.8e-11 73.2 62 61.3
HanXRQChr05g0158341 Helianthus annuus HOM05D005598 ORTHO05D006587 1.8e-10 70.5 91 48.4
Cfa026153 Carpinus fangiana HOM05D005598 ORTHO05D006587 6.8e-10 68.6 149 33.6
Glyma.07G162800 Glycine max HOM05D005598 ORTHO05D006587 1.2e-09 67.8 116 42.2
Psat4g059000 Pisum sativum HOM05D005598 ORTHO05D006587 9.8e-09 64.7 49 71.4
Lalb_Chr21g0309161 Lupinus albus HOM05D005598 ORTHO05D006587 3.7e-08 62.8 49 69.4


User provided reference genes

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