Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 2.6e-272 941.4 472 100.0
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 4.6e-232 807.7 472 85.6
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 9.5e-230 800.0 482 83.4
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 3.0e-223 778.5 471 82.8
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 2.8e-221 771.9 474 82.3
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 3.1e-220 768.5 473 80.1
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 1.5e-219 766.1 475 82.1
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 5.8e-219 764.2 474 81.4
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 3.7e-218 761.5 474 81.0
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 3.7e-218 761.5 474 80.8
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 5.4e-217 757.7 473 81.2
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 7.1e-217 757.3 471 82.0
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 2.7e-216 755.4 473 82.0
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 7.8e-216 753.8 473 80.8
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 1.0e-215 753.4 472 79.7
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 1.7e-215 752.7 473 81.6
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 2.5e-214 748.8 473 80.5
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 9.5e-214 746.9 470 79.4
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 1.2e-213 746.5 473 80.3
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 2.8e-213 745.3 470 79.6
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 3.1e-212 741.9 473 77.8
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 3.4e-211 738.4 473 80.3
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 3.4e-211 738.4 473 79.1
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 5.8e-211 737.6 475 78.1
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 7.6e-211 737.3 473 78.4
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 1.7e-210 736.1 467 78.6
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.7e-210 736.1 473 76.1
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.7e-210 736.1 473 77.4
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 4.9e-210 734.6 471 79.0
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 6.4e-210 734.2 475 78.3
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 2.4e-209 732.3 475 78.7
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 3.2e-209 731.9 471 80.9
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 1.2e-208 729.9 475 76.0
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 1.6e-208 729.6 473 78.4
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 6.0e-208 727.6 474 78.5
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.0e-207 726.9 473 75.1
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 3.0e-207 725.3 471 77.1
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 3.9e-207 724.9 473 78.0
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 1.1e-206 723.4 473 76.5
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 1.1e-206 723.4 475 78.5
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 1.5e-206 723.0 473 74.4
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 4.3e-206 721.5 473 77.4
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 9.6e-206 720.3 473 77.0
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 2.1e-205 719.2 472 73.7
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 1.4e-204 716.5 473 76.7
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 1.4e-204 716.5 473 78.2
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 1.5e-203 713.0 471 77.1
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 1.5e-203 713.0 473 75.9
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 9.9e-203 710.3 473 76.1
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 4.9e-202 708.0 474 76.6
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 4.9e-202 708.0 473 73.4
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 6.4e-202 707.6 472 75.0
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 1.1e-201 706.8 472 75.2
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 1.3e-199 699.9 473 74.8
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 8.7e-199 697.2 474 75.3
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 8.7e-199 697.2 475 75.6
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 2.5e-198 695.7 473 75.7
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 3.3e-198 695.3 477 74.2
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 7.3e-198 694.1 473 76.5
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 1.6e-197 693.0 473 75.3
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 6.2e-197 691.0 473 74.8
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 1.1e-196 690.3 462 74.7
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 1.1e-196 690.3 475 75.2
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 1.4e-196 689.9 475 75.2
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 5.8e-195 684.5 474 74.1
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 2.9e-194 682.2 398 81.2
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 6.4e-194 681.0 462 74.0
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 8.4e-194 680.6 465 74.8
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 1.4e-193 679.9 462 74.9
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 1.9e-193 679.5 462 71.9
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 1.9e-193 679.5 478 74.1
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 7.1e-193 677.6 462 71.4
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 2.1e-192 676.0 486 72.0
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 1.0e-191 673.7 466 70.8
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 1.3e-191 673.3 484 69.8
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 1.8e-191 672.9 462 72.7
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 1.8e-191 672.9 467 70.7
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 5.1e-191 671.4 466 70.6
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 6.7e-191 671.0 467 70.7
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 1.1e-190 670.2 467 70.2
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 2.8e-189 665.6 499 69.9
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 1.8e-188 662.9 473 71.2
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 2.6e-187 659.1 477 72.1
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 4.5e-187 658.3 468 68.4
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 1.4e-185 653.3 468 69.0
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 1.9e-185 652.9 471 68.6
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 5.1e-183 644.8 477 70.0
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 8.4e-178 627.5 464 67.2
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 3.2e-169 599.0 575 58.3
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 6.7e-167 591.3 473 64.1
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 1.3e-165 587.0 410 68.3
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 1.7e-165 586.6 596 57.2
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 3.8e-154 548.9 426 61.7
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 1.1e-150 537.3 472 61.9
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 1.6e-147 526.9 380 70.5
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 2.9e-146 522.7 388 68.8
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 3.7e-125 452.6 597 47.4
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 1.6e-115 420.6 359 62.1
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 5.6e-97 359.0 247 68.0
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 3.6e-96 356.3 374 50.8
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 3.9e-90 336.3 219 74.9
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 7.3e-89 332.0 412 46.6
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 1.3e-82 311.2 235 69.8
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 1.1e-65 255.0 431 36.4
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 8.2e-56 222.2 217 53.9
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 2.3e-42 177.6 413 30.5
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 7.4e-41 172.6 156 63.5
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 2.6e-25 120.9 86 66.3
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 4.8e-24 116.7 60 86.7
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 3.1e-23 114.0 81 66.7
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.8e-18 98.2 112 48.2
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.8e-18 98.2 112 48.2
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 2.0e-17 94.7 56 73.2
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 2.1e-11 74.7 85 45.9
MCO14G318 Micromonas commoda HOM05D006589 ORTHO05D008350 5.2e-10 70.1 109 37.6
Cre07.g348500 Chlamydomonas reinhardtii HOM05D006589 ORTHO05D008350 8.3e-08 62.8 79 36.7


User provided reference genes

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