Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G186900 Carya illinoinensis HOM05D006818 ORTHO05D008674 5.0e-193 677.6 332 100.0
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 1.3e-161 573.2 334 82.9
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 2.9e-156 555.4 335 81.5
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 3.7e-156 555.1 334 81.7
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 2.9e-148 528.9 331 77.9
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 6.6e-145 517.7 313 79.6
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 1.5e-144 516.5 335 77.0
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 3.3e-144 515.4 332 76.5
Ciclev10008835m.g Citrus clementina HOM05D006818 ORTHO05D008674 9.6e-144 513.8 341 76.0
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 1.8e-142 509.6 330 76.4
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 4.4e-141 505.0 329 75.4
TWI39G0401 Tripterygium wilfordii HOM05D006818 ORTHO05D008674 4.4e-141 505.0 332 74.7
COL.COLO4_09629 Corchorus olitorius HOM05D006818 ORTHO05D008674 7.6e-141 504.2 335 75.2
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 6.4e-140 501.1 332 75.9
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 2.4e-139 499.2 332 75.6
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 3.2e-139 498.8 316 76.9
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 9.3e-139 497.3 320 77.2
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 2.1e-138 496.1 332 75.6
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 1.3e-137 493.4 335 74.3
Potri.001G420800 Populus trichocarpa HOM05D006818 ORTHO05D008674 1.7e-137 493.0 332 73.5
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 2.3e-137 492.7 337 73.3
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 5.1e-137 491.5 333 72.7
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 1.9e-136 489.6 332 73.5
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 5.6e-136 488.0 307 77.5
Eucgr.F03445 Eucalyptus grandis HOM05D006818 ORTHO05D008674 7.3e-136 487.6 330 72.7
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 9.6e-136 487.3 339 73.2
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 9.6e-136 487.3 326 75.2
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 9.6e-136 487.3 331 74.3
Peaxi162Scf01097g00023 Petunia axillaris HOM05D006818 ORTHO05D008674 1.3e-135 486.9 330 72.1
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 1.6e-135 486.5 331 71.9
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 2.8e-135 485.7 312 75.0
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 1.1e-134 483.8 332 72.9
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 1.4e-134 483.4 335 73.1
Nn1g07100 Nelumbo nucifera HOM05D006818 ORTHO05D008674 1.8e-134 483.0 337 73.6
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 2.4e-134 482.6 330 73.0
Atru.chr2.3275 Acer truncatum HOM05D006818 ORTHO05D008674 6.9e-134 481.1 341 71.6
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 6.9e-134 481.1 312 74.7
RcHm_v2.0_Chr5g0037981 Rosa chinensis HOM05D006818 ORTHO05D008674 9.0e-134 480.7 331 70.7
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 2.0e-133 479.6 329 70.5
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 4.5e-133 478.4 334 71.0
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 4.5e-133 478.4 329 70.5
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 7.6e-133 477.6 336 70.2
PGR031G1507 Punica granatum HOM05D006818 ORTHO05D008674 6.4e-132 474.6 332 71.1
MD11G1222300 Malus domestica HOM05D006818 ORTHO05D008674 8.4e-132 474.2 328 70.1
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 1.1e-131 473.8 330 72.4
Oeu005459.1 Olea europaea HOM05D006818 ORTHO05D008674 5.4e-131 471.5 331 70.4
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 7.1e-131 471.1 329 72.0
Sabra16G0285700 Salix brachista HOM05D006818 ORTHO05D008674 1.2e-130 470.3 350 68.9
FvH4_3g22121 Fragaria vesca HOM05D006818 ORTHO05D008674 3.5e-130 468.8 336 68.2
Ah.06g195870 Amaranthus hybridus HOM05D006818 ORTHO05D008674 6.0e-130 468.0 339 67.8
Aqoxy1G03627 Aquilegia oxysepala HOM05D006818 ORTHO05D008674 6.0e-130 468.0 335 69.3
Cc05_g13490 Coffea canephora HOM05D006818 ORTHO05D008674 3.9e-129 465.3 329 68.7
CAN.G315.6 Capsicum annuum HOM05D006818 ORTHO05D008674 4.3e-128 461.8 330 68.8
Medtr5g092080 Medicago truncatula HOM05D006818 ORTHO05D008674 7.4e-128 461.1 335 69.0
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 2.1e-127 459.5 332 69.9
Sc06g0005170 Simmondsia chinensis HOM05D006818 ORTHO05D008674 2.6e-125 452.6 333 67.6
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 9.9e-125 450.7 338 69.5
Hund07318 Selenicereus undatus HOM05D006818 ORTHO05D008674 2.4e-123 446.0 340 65.9
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea HOM05D006818 ORTHO05D008674 1.6e-122 443.4 340 69.4
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea HOM05D006818 ORTHO05D008674 4.6e-122 441.8 340 69.1
DCAR_022551 Daucus carota HOM05D006818 ORTHO05D008674 4.6e-122 441.8 336 65.8
Lsat_1_v5_gn_7_109080 Lactuca sativa HOM05D006818 ORTHO05D008674 1.9e-120 436.4 325 68.3
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 4.3e-120 435.3 268 77.6
EL10Ac4g09438 Beta vulgaris HOM05D006818 ORTHO05D008674 5.6e-120 434.9 354 61.6
PSO210G7832 Papaver somniferum HOM05D006818 ORTHO05D008674 3.1e-118 429.1 325 67.1
Migut.M01786 Erythranthe guttata HOM05D006818 ORTHO05D008674 4.0e-118 428.7 308 69.2
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 4.0e-118 428.7 300 68.3
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 4.0e-118 428.7 284 71.8
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 6.9e-118 427.9 246 82.9
CDE01G0156 Ceratophyllum demersum HOM05D006818 ORTHO05D008674 1.2e-117 427.2 304 67.1
ECA236G4406 Erigeron canadensis HOM05D006818 ORTHO05D008674 2.6e-117 426.0 320 67.2
ATR0752G046 Amborella trichopoda HOM05D006818 ORTHO05D008674 5.8e-117 424.9 272 75.0
SpUn0103_0020 Schrenkiella parvula HOM05D006818 ORTHO05D008674 5.8e-117 424.9 329 66.3
HanXRQChr15g0494291 Helianthus annuus HOM05D006818 ORTHO05D008674 7.6e-117 424.5 332 67.2
SGA_v2.0_scaffold80G25946 Striga asiatica HOM05D006818 ORTHO05D008674 1.7e-116 423.3 333 66.1
PSO832G0412 Papaver somniferum HOM05D006818 ORTHO05D008674 8.4e-116 421.0 307 69.1
A06p27360 Brassica napus HOM05D006818 ORTHO05D008674 3.5e-114 415.6 306 68.6
BraA06t25672Z Brassica rapa HOM05D006818 ORTHO05D008674 3.5e-114 415.6 306 68.6
Actinidia05109 Actinidia chinensis HOM05D006818 ORTHO05D008674 4.6e-114 415.2 329 64.7
AL5G27200 Arabidopsis lyrata HOM05D006818 ORTHO05D008674 7.9e-114 414.5 339 61.7
Carub.0005s1401 Capsella rubella HOM05D006818 ORTHO05D008674 1.0e-113 414.1 311 67.2
Zm00001eb070100 Zea mays HOM05D006818 ORTHO05D008674 3.0e-113 412.5 326 63.5
BcaB02g10686 Brassica carinata HOM05D006818 ORTHO05D008674 3.9e-113 412.1 328 64.3
Thhalv10010497m.g Eutrema salsugineum HOM05D006818 ORTHO05D008674 1.1e-112 410.6 330 63.9
BcaC01g02294 Brassica carinata HOM05D006818 ORTHO05D008674 1.5e-112 410.2 306 67.6
C03p66930 Brassica napus HOM05D006818 ORTHO05D008674 1.5e-112 410.2 306 67.6
BolC3t18966H Brassica oleracea HOM05D006818 ORTHO05D008674 1.9e-112 409.8 306 67.6
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 4.8e-111 405.2 270 70.7
Atru.BG.12.p Acer truncatum HOM05D006818 ORTHO05D008674 6.3e-111 404.8 232 83.6
Aa31LG4G16540 Aethionema arabicum HOM05D006818 ORTHO05D008674 6.3e-111 404.8 312 64.7
Os04g0626400 Oryza sativa ssp. japonica HOM05D006818 ORTHO05D008674 6.3e-111 404.8 314 65.0
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 6.3e-111 404.8 338 62.1
AT3G47860 Arabidopsis thaliana HOM05D006818 ORTHO05D008674 2.4e-110 402.9 306 66.0
unitig_62.g23277 Utricularia gibba HOM05D006818 ORTHO05D008674 2.6e-109 399.4 329 62.0
HPP92_009349 Vanilla planifolia HOM05D006818 ORTHO05D008674 8.7e-105 384.4 251 73.3
Sp5g14080 Schrenkiella parvula HOM05D006818 ORTHO05D008674 3.1e-102 375.9 287 66.9
AUR62006731 Chenopodium quinoa HOM05D006818 ORTHO05D008674 1.7e-100 370.2 217 79.3
MD03G1208100 Malus domestica HOM05D006818 ORTHO05D008674 2.1e-98 363.2 308 59.4
AUR62000376 Chenopodium quinoa HOM05D006818 ORTHO05D008674 9.1e-94 347.8 330 55.5
Mapoly0115s0028 Marchantia polymorpha HOM05D006818 ORTHO05D008674 2.8e-87 326.2 322 52.5
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 5.9e-85 318.5 183 82.5
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 5.9e-85 318.5 183 82.5
SMO147G0254 Selaginella moellendorffii HOM05D006818 ORTHO05D008674 1.9e-83 313.5 233 61.8
TPR.G12727 Trifolium pratense HOM05D006818 ORTHO05D008674 1.0e-81 307.8 243 64.6
Pp3c9_6110 Physcomitrium patens HOM05D006818 ORTHO05D008674 6.7e-81 305.1 306 50.0
TPR.G29121 Trifolium pratense HOM05D006818 ORTHO05D008674 3.0e-73 279.6 197 71.1
SEGI_29406 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 5.9e-69 265.4 216 57.4
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis HOM05D006818 ORTHO05D008674 1.5e-64 250.8 189 62.4
TPR.G29124 Trifolium pratense HOM05D006818 ORTHO05D008674 2.0e-61 240.4 150 78.7
CBR_g57971 Chara braunii HOM05D006818 ORTHO05D008674 9.8e-56 221.5 201 54.7
PRCOL_00005879 Prasinoderma coloniale HOM05D006818 ORTHO05D008674 4.7e-42 176.0 167 50.3
RcHm_v2.0_Chr3g0496801 Rosa chinensis HOM05D006818 ORTHO05D008674 1.4e-38 164.5 141 56.7
Glyma.14G153300 Glycine max HOM05D006818 ORTHO05D008674 4.0e-33 146.4 78 85.9
Ah.06g195920 Amaranthus hybridus HOM05D001023 ORTHO05D000912 7.1e-30 135.6 144 51.4
Actinidia09914 Actinidia chinensis HOM05D006818 ORTHO05D008674 3.3e-19 100.1 59 78.0
SEGI_26249 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 4.0e-09 66.6 52 63.5
MD02G1010500 Malus domestica HOM05D003204 ORTHO05D003566 4.5e-08 63.2 175 29.7
Atru.chr7.159 Acer truncatum HOM05D003204 ORTHO05D003566 2.2e-07 60.8 167 29.9
Eucgr.C04044 Eucalyptus grandis HOM05D003204 ORTHO05D003566 8.4e-07 58.9 168 31.5
Eucgr.L00627 Eucalyptus grandis HOM05D003204 ORTHO05D003566 8.4e-07 58.9 168 31.5
FvH4_1g01260 Fragaria vesca HOM05D003204 ORTHO05D003566 8.4e-07 58.9 170 28.8
BcaB08g36152 Brassica carinata HOM05D003204 ORTHO05D003566 1.1e-06 58.5 170 28.8
BcaC03g14125 Brassica carinata HOM05D003204 ORTHO05D003566 1.1e-06 58.5 178 30.3
Lalb_Chr13g0301021 Lupinus albus HOM05D003204 ORTHO05D003566 1.1e-06 58.5 167 29.9
FAN26G1065 Fragaria x ananassa HOM05D003204 ORTHO05D003566 1.4e-06 58.2 167 29.9
Thecc.09G034200 Theobroma cacao HOM05D003204 ORTHO05D003566 1.9e-06 57.8 167 29.9
BcaB01g04554 Brassica carinata HOM05D003204 ORTHO05D003566 2.5e-06 57.4 182 28.0
C03p14580 Brassica napus HOM05D003204 ORTHO05D003566 2.5e-06 57.4 182 28.0
BolC3t13899H Brassica oleracea HOM05D003204 ORTHO05D003566 2.5e-06 57.4 182 28.0
Duzib168G0965 Durio zibethinus HOM05D003204 ORTHO05D003566 3.2e-06 57.0 167 29.3
THA.LOC104811838 Tarenaya hassleriana HOM05D003204 ORTHO05D003566 3.2e-06 57.0 170 27.6
VMungo1309G2170 Vigna mungo HOM05D003204 ORTHO05D003566 3.2e-06 57.0 167 29.3
COL.COLO4_18771 Corchorus olitorius HOM05D003204 ORTHO05D003566 5.5e-06 56.2 167 29.9
Manes.06G038651 Manihot esculenta HOM05D003204 ORTHO05D003566 5.5e-06 56.2 167 28.7
Eucgr.C00377 Eucalyptus grandis HOM05D003204 ORTHO05D003566 9.3e-06 55.5 167 29.9
PSO384G3133 Papaver somniferum HOM05D003204 ORTHO05D003566 9.3e-06 55.5 167 28.1
RcHm_v2.0_Chr2g0086051 Rosa chinensis HOM05D003204 ORTHO05D003566 9.3e-06 55.5 167 29.9


User provided reference genes

Program Settings