Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G019900 Carya illinoinensis HOM05D003157 ORTHO05D028662 1.3e-123 446.4 226 100.0
CiPaw.11G020500 Carya illinoinensis HOM05D003157 ORTHO05D028662 4.0e-61 238.8 223 65.5
CiPaw.11G020100 Carya illinoinensis HOM05D003157 ORTHO05D028662 3.4e-52 209.1 186 66.1
CiPaw.11G019800 Carya illinoinensis HOM05D003157 ORTHO05D004447 4.8e-22 109.0 208 42.3
CiPaw.11G020300 Carya illinoinensis HOM05D003157 ORTHO05D012168 9.1e-21 104.8 187 44.4
Haze_07584 Corylus avellana HOM05D003157 ORTHO05D004447 1.0e-19 101.3 219 38.8
Potri.015G084000 Populus trichocarpa HOM05D003157 ORTHO05D004447 1.3e-19 100.9 185 42.2
QL10p006899 Quercus lobata HOM05D003157 ORTHO05D004447 1.7e-19 100.5 190 43.2
Sabra15G0107200 Salix brachista HOM05D003157 ORTHO05D004447 8.5e-19 98.2 180 41.7
TWI23G0818 Tripterygium wilfordii HOM05D003157 ORTHO05D004447 1.1e-18 97.8 210 37.6
Potri.012G085700 Populus trichocarpa HOM05D003157 ORTHO05D004447 7.2e-18 95.1 192 40.1
Ciclev10024152m.g Citrus clementina HOM05D003157 ORTHO05D004447 1.6e-17 94.0 198 37.9
Thecc.03G025700 Theobroma cacao HOM05D003157 ORTHO05D004447 2.1e-17 93.6 180 42.8
TWI14G1342 Tripterygium wilfordii HOM05D003157 ORTHO05D004447 3.6e-17 92.8 185 39.5
Dinv20600 Davidia involucrata HOM05D003157 ORTHO05D004447 6.1e-17 92.0 225 36.9
Cfa019214 Carpinus fangiana HOM05D003157 ORTHO05D004447 2.3e-16 90.1 217 36.9
Sabra12G0061600 Salix brachista HOM05D003157 ORTHO05D004447 3.0e-16 89.7 195 39.5
CANSAT80G2678 Cannabis sativa HOM05D003157 ORTHO05D004447 4.0e-16 89.4 196 37.2
Rhsim12G0167900 Rhododendron simsii HOM05D003157 ORTHO05D004447 4.0e-16 89.4 195 39.5
Manes.14G060700 Manihot esculenta HOM05D003157 ORTHO05D004447 8.8e-16 88.2 197 36.5
Manes.06G110100 Manihot esculenta HOM05D003157 ORTHO05D004447 1.5e-15 87.4 190 37.9
vmacro16645 Vaccinium macrocarpon HOM05D003157 ORTHO05D004447 2.0e-15 87.0 165 43.0
MSTRG.11494 Avicennia marina HOM05D003157 ORTHO05D004447 3.4e-15 86.3 205 37.1
CSS0041144 Camellia sinensis var. sinensis HOM05D003157 ORTHO05D004447 3.4e-15 86.3 223 33.2
Gohir.D03G106700 Gossypium hirsutum HOM05D003157 ORTHO05D004447 4.4e-15 85.9 178 38.2
Gorai.003G115800 Gossypium raimondii HOM05D003157 ORTHO05D004447 4.4e-15 85.9 178 38.2
TAR629G0508 Trochodendron aralioides HOM05D003157 ORTHO05D004447 9.8e-15 84.7 197 38.6
Hund02785 Selenicereus undatus HOM05D003157 ORTHO05D004447 2.2e-14 83.6 213 33.8
Gohir.A03G056900 Gossypium hirsutum HOM05D003157 ORTHO05D004447 4.8e-14 82.4 178 37.6
CiPaw.11G020200 Carya illinoinensis HOM05D003157 ORTHO05D028662 6.3e-14 82.0 54 85.2
Prupe.5G165800 Prunus persica HOM05D003157 ORTHO05D004447 6.3e-14 82.0 191 37.7
Gohir.D11G043500 Gossypium hirsutum HOM05D003157 ORTHO05D004447 1.4e-13 80.9 194 36.1
SalBow6G1229 Salvia bowleyana HOM05D003157 ORTHO05D004447 2.4e-13 80.1 191 37.2
MSTRG.9691 Avicennia marina HOM05D003157 ORTHO05D004447 4.1e-13 79.3 190 37.9
Oeu040857.2 Olea europaea HOM05D003157 ORTHO05D004447 4.1e-13 79.3 211 33.2
Peaxi162Scf00089g01334 Petunia axillaris HOM05D003157 ORTHO05D004447 4.1e-13 79.3 192 34.4
Migut.D01995 Erythranthe guttata HOM05D003157 ORTHO05D004447 5.4e-13 79.0 184 36.4
Gohir.A11G040300 Gossypium hirsutum HOM05D003157 ORTHO05D004447 5.4e-13 79.0 178 36.0
Nitab4.5_0001793g0010 Nicotiana tabacum HOM05D003157 ORTHO05D004447 5.4e-13 79.0 148 39.9
Rhsim08G0177500 Rhododendron simsii HOM05D003157 ORTHO05D004447 5.4e-13 79.0 219 32.4
Gorai.007G046900 Gossypium raimondii HOM05D003157 ORTHO05D004447 9.1e-13 78.2 223 34.5
ClCG03G002990 Citrullus lanatus HOM05D003157 ORTHO05D004447 1.2e-12 77.8 162 35.8
Nitab4.5_0010452g0010 Nicotiana tabacum HOM05D003157 ORTHO05D004447 1.2e-12 77.8 148 39.2
Atru.chr9.2574 Acer truncatum HOM05D003157 ORTHO05D004447 1.6e-12 77.4 172 35.5
MD06G1165900 Malus domestica HOM05D003157 ORTHO05D004447 1.6e-12 77.4 166 38.6
MELO3C002297.2 Cucumis melo HOM05D003157 ORTHO05D004447 2.0e-12 77.0 194 34.0
TAR371G0612 Trochodendron aralioides HOM05D003157 ORTHO05D004447 2.7e-12 76.6 204 34.3
HanXRQChr10g0296081 Helianthus annuus HOM05D003157 ORTHO05D004447 3.5e-12 76.3 201 33.8
HanXRQChr16g0504701 Helianthus annuus HOM05D003157 ORTHO05D004447 7.7e-12 75.1 204 35.8
Sed0005003 Sechium edule HOM05D003157 ORTHO05D004447 7.7e-12 75.1 212 29.2
EL10Ac5g10658 Beta vulgaris HOM05D003157 ORTHO05D004447 1.0e-11 74.7 205 32.2
vmacro19300 Vaccinium macrocarpon HOM05D003157 ORTHO05D004447 2.9e-11 73.2 163 35.6
ClCG01G013500 Citrullus lanatus HOM05D003157 ORTHO05D004447 6.5e-11 72.0 198 31.3
AUR62028729 Chenopodium quinoa HOM05D003157 ORTHO05D004447 8.5e-11 71.6 221 31.7
Lsat_1_v5_gn_4_77240 Lactuca sativa HOM05D003157 ORTHO05D004447 8.5e-11 71.6 202 34.2
Actinidia08033 Actinidia chinensis HOM05D000048 ORTHO05D004447 1.1e-10 71.2 174 33.9
Actinidia24597 Actinidia chinensis HOM05D003157 ORTHO05D004447 1.1e-10 71.2 174 33.9
SHI17273 Sapria himalayana HOM05D003157 ORTHO05D004447 1.1e-10 71.2 211 28.4
Actinidia08960 Actinidia chinensis HOM05D003157 ORTHO05D004447 1.5e-10 70.9 230 30.9
MBI19_g29861_MAGBIO Magnolia biondii HOM05D003157 ORTHO05D004447 1.5e-10 70.9 135 40.0
CAN.G338.32 Capsicum annuum HOM05D003157 ORTHO05D004447 1.9e-10 70.5 189 31.7
Cpa.g.sc159.27 Carica papaya HOM05D003157 ORTHO05D004447 1.9e-10 70.5 137 35.0
AUR62008147 Chenopodium quinoa HOM05D003157 ORTHO05D004447 1.9e-10 70.5 204 33.3
MBI18_g17021_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.9e-10 70.5 145 37.9
Sc12g0005010 Simmondsia chinensis HOM05D003157 ORTHO05D004447 1.9e-10 70.5 213 34.3
Sopen06g028060 Solanum pennellii HOM05D003157 ORTHO05D004447 1.9e-10 70.5 169 33.1
Eucgr.K02800 Eucalyptus grandis HOM05D003157 ORTHO05D004447 2.5e-10 70.1 179 34.1
PGSC0003DMG400027073 Solanum tuberosum HOM05D003157 ORTHO05D004447 2.5e-10 70.1 174 32.8
MD14G1171800 Malus domestica HOM05D003157 ORTHO05D004447 3.2e-10 69.7 162 36.4
Medtr4g104880 Medicago truncatula HOM05D003157 ORTHO05D004447 3.2e-10 69.7 205 31.2
Thhalv10024557m.g Eutrema salsugineum HOM05D003157 ORTHO05D004447 4.2e-10 69.3 147 35.4
Ca_14277_v3 Cicer arietinum L. HOM05D003157 ORTHO05D004447 5.5e-10 68.9 199 32.2
PGR044G1972 Punica granatum HOM05D003157 ORTHO05D004447 5.5e-10 68.9 190 32.6
Solyc06g071770.4 Solanum lycopersicum HOM05D003157 ORTHO05D004447 5.5e-10 68.9 174 32.2
GSVIVG01007647001 Vitis vinifera HOM05D003157 ORTHO05D004447 5.5e-10 68.9 191 32.5
Lj5A130T68 Lonicera japonica HOM05D003157 ORTHO05D004447 7.2e-10 68.6 200 32.5
RcHm_v2.0_Chr7g0192591 Rosa chinensis HOM05D003157 ORTHO05D004447 7.2e-10 68.6 173 33.5
Sp7g22680 Schrenkiella parvula HOM05D003157 ORTHO05D004447 7.2e-10 68.6 216 31.9
CsaV3_1G008830 Cucumis sativus L. HOM05D003157 ORTHO05D004447 9.4e-10 68.2 204 30.9
TPR.G37494 Trifolium pratense HOM05D003157 ORTHO05D004447 1.2e-09 67.8 179 33.5
Sed0026079 Sechium edule HOM05D003157 ORTHO05D004447 1.6e-09 67.4 221 29.9
AT4G24690 Arabidopsis thaliana HOM05D003157 ORTHO05D004447 2.7e-09 66.6 142 35.2
CAN.G993.20 Capsicum annuum HOM05D003157 ORTHO05D004447 3.6e-09 66.2 179 34.1
Sopen03g031330 Solanum pennellii HOM05D003157 ORTHO05D004447 3.6e-09 66.2 177 31.1
PGSC0003DMG400018122 Solanum tuberosum HOM05D003157 ORTHO05D004447 3.6e-09 66.2 211 30.8
COL.COLO4_24272 Corchorus olitorius HOM05D003157 ORTHO05D004447 4.7e-09 65.9 176 32.4
Solyc03g112230.4 Solanum lycopersicum HOM05D003157 ORTHO05D004447 4.7e-09 65.9 176 31.2
BcaC09g50840 Brassica carinata HOM05D003157 ORTHO05D004447 6.1e-09 65.5 144 34.0
C01p20020 Brassica napus HOM05D003157 ORTHO05D004447 6.1e-09 65.5 144 34.0
FvH4_5g06270 Fragaria vesca HOM05D003157 ORTHO05D004447 6.1e-09 65.5 173 34.1
Psat4g060880 Pisum sativum HOM05D003157 ORTHO05D004447 6.1e-09 65.5 200 30.0
ECA232G3241 Erigeron canadensis HOM05D003157 ORTHO05D004447 8.0e-09 65.1 220 31.8
FAN04G1965 Fragaria x ananassa HOM05D003157 ORTHO05D004447 1.0e-08 64.7 173 34.1
Lj9A442T64 Lonicera japonica HOM05D003157 ORTHO05D004447 1.0e-08 64.7 182 33.5
Lalb_Chr13g0297581 Lupinus albus HOM05D003157 ORTHO05D004447 1.0e-08 64.7 190 32.6
BcaC06g32868 Brassica carinata HOM05D003157 ORTHO05D004447 1.4e-08 64.3 195 29.7
THA.LOC104809775 Tarenaya hassleriana HOM05D003157 ORTHO05D004447 1.4e-08 64.3 146 32.9
A01p16030 Brassica napus HOM05D003157 ORTHO05D004447 2.3e-08 63.5 144 34.0
BolC7t45866H Brassica oleracea HOM05D003157 ORTHO05D004447 3.0e-08 63.2 201 31.3
PSO754G0123 Papaver somniferum HOM05D003157 ORTHO05D004447 3.0e-08 63.2 212 33.0
Lalb_Chr07g0182971 Lupinus albus HOM05D003157 ORTHO05D004447 4.0e-08 62.8 187 29.4
PSO111G0086 Papaver somniferum HOM05D003157 ORTHO05D004447 4.0e-08 62.8 212 32.5
BcaC07g38161 Brassica carinata HOM05D003157 ORTHO05D004447 5.2e-08 62.4 140 35.0
Lsat_1_v5_gn_1_27780 Lactuca sativa HOM05D003157 ORTHO05D004447 5.2e-08 62.4 137 36.5
Ah.11g051160 Amaranthus hybridus HOM05D003157 ORTHO05D004447 6.8e-08 62.0 223 28.7
CARHR232070 Cardamine hirsuta HOM05D003157 ORTHO05D004447 6.8e-08 62.0 178 28.7
Peaxi162Scf00763g00430 Petunia axillaris HOM05D003157 ORTHO05D004447 6.8e-08 62.0 123 38.2
C07p53750 Brassica napus HOM05D003157 ORTHO05D004447 8.8e-08 61.6 200 31.5
FAN13G0746 Fragaria x ananassa HOM05D003157 ORTHO05D004447 8.8e-08 61.6 220 29.5
Nitab4.5_0000003g0820 Nicotiana tabacum HOM05D003157 ORTHO05D004447 1.2e-07 61.2 209 31.1
FAN08G1011 Fragaria x ananassa HOM05D003157 ORTHO05D004447 1.5e-07 60.8 174 32.8
BraA01t01537Z Brassica rapa HOM05D003157 ORTHO05D004447 2.0e-07 60.5 144 33.3
Nitab4.5_0008713g0020 Nicotiana tabacum HOM05D003157 ORTHO05D004447 2.0e-07 60.5 209 31.1
BolC1t01929H Brassica oleracea HOM05D003157 ORTHO05D004447 2.6e-07 60.1 197 29.4
DCAR_021588 Daucus carota HOM05D003157 ORTHO05D004447 2.6e-07 60.1 173 31.8
DCAR_026172 Daucus carota HOM05D003157 ORTHO05D004447 2.6e-07 60.1 149 33.6
FAN18G2672 Fragaria x ananassa HOM05D003157 ORTHO05D004447 2.6e-07 60.1 148 34.5
BraA08t34089Z Brassica rapa HOM05D003157 ORTHO05D004447 5.7e-07 58.9 95 36.8
Cc04_g11550 Coffea canephora HOM05D003157 ORTHO05D004447 5.7e-07 58.9 197 31.0
Os04g0476800 Oryza sativa ssp. japonica HOM05D003157 ORTHO05D004447 7.5e-07 58.5 178 33.7
BolC8t48585H Brassica oleracea HOM05D003157 ORTHO05D004447 9.8e-07 58.2 141 34.8
Os02g0593700 Oryza sativa ssp. japonica HOM05D003157 ORTHO05D004447 1.3e-06 57.8 191 29.3
SGA_v2.0_scaffold114G31812 Striga asiatica HOM05D003157 ORTHO05D004447 1.3e-06 57.8 155 37.4
A08p21390 Brassica napus HOM05D003157 ORTHO05D004447 1.7e-06 57.4 95 36.8
Oeu020884.3 Olea europaea HOM05D003157 ORTHO05D004447 1.7e-06 57.4 218 34.9
Lsat_1_v5_gn_8_131800 Lactuca sativa HOM05D003157 ORTHO05D004447 2.2e-06 57.0 181 32.0
Aa31LG4G9790 Aethionema arabicum HOM05D003157 ORTHO05D004447 2.8e-06 56.6 202 29.7
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 2.8e-06 56.6 183 29.5
ATR0824G119 Amborella trichopoda HOM05D003157 ORTHO05D004447 4.9e-06 55.8 138 31.2
AL7G28510 Arabidopsis lyrata HOM05D003157 ORTHO05D004447 8.3e-06 55.1 146 34.2


User provided reference genes

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