Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 1.2e-264 916.0 471 100.0
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 2.5e-166 589.3 460 69.3
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 7.7e-163 577.8 464 64.9
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 2.4e-156 556.2 468 63.2
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 3.2e-153 545.8 466 61.8
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 1.2e-152 543.9 466 61.2
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 3.7e-149 532.3 471 61.1
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 4.2e-145 518.8 466 60.1
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 9.4e-145 517.7 468 60.5
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 1.6e-144 516.9 466 58.6
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 1.1e-142 510.8 466 58.4
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 7.4e-142 508.1 477 59.7
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 7.4e-142 508.1 471 58.0
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 1.7e-141 506.9 463 59.6
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 1.7e-141 506.9 470 58.3
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 1.0e-138 497.7 466 56.9
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 1.0e-138 497.7 464 58.8
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 7.2e-137 491.5 465 56.6
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 7.2e-137 491.5 473 55.8
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 4.7e-136 488.8 468 57.1
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 4.0e-135 485.7 467 56.5
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 5.2e-135 485.3 475 55.4
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 3.3e-134 482.6 471 58.4
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 1.8e-132 476.9 472 54.9
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 4.1e-132 475.7 467 56.7
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 1.6e-131 473.8 467 53.5
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 5.9e-131 471.9 472 54.4
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 2.1e-128 463.4 467 52.0
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 4.0e-127 459.1 460 54.6
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 4.4e-126 455.7 414 58.7
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 1.4e-124 450.7 468 55.1
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 4.5e-123 445.7 451 54.5
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 2.9e-122 443.0 475 50.1
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 6.6e-122 441.8 468 51.5
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 1.1e-121 441.0 485 51.3
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 9.5e-121 438.0 300 77.0
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 9.5e-121 438.0 466 53.2
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 2.1e-120 436.8 471 49.0
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 2.8e-120 436.4 465 51.4
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 2.8e-120 436.4 469 51.0
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 4.7e-120 435.6 477 48.6
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 6.1e-120 435.3 467 52.2
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 1.0e-119 434.5 469 48.6
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 2.0e-118 430.3 415 55.2
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 2.6e-118 429.9 486 50.6
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 4.9e-117 425.6 460 51.7
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 8.3e-117 424.9 446 51.6
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 1.4e-116 424.1 466 50.4
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 2.4e-116 423.3 463 49.7
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 4.1e-116 422.5 473 51.6
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 5.4e-116 422.2 465 49.9
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 2.7e-115 419.9 439 50.6
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 4.5e-115 419.1 473 50.3
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 2.9e-114 416.4 438 53.0
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 1.1e-113 414.5 474 50.2
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 4.3e-113 412.5 469 49.7
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 9.5e-113 411.4 470 46.6
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 9.5e-113 411.4 336 63.7
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 1.2e-112 411.0 489 48.1
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 1.6e-112 410.6 467 48.0
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 1.6e-112 410.6 472 51.3
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 4.7e-112 409.1 466 47.6
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 1.4e-111 407.5 470 49.1
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 4.0e-111 406.0 448 50.7
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 3.4e-110 402.9 467 48.0
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 3.7e-109 399.4 455 49.9
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 4.9e-109 399.1 467 49.5
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 3.5e-107 392.9 473 47.8
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 3.0e-106 389.8 466 50.6
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 5.0e-106 389.0 347 59.4
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 1.9e-105 387.1 470 47.2
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 2.5e-105 386.7 464 47.4
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 3.6e-104 382.9 478 44.8
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 1.4e-103 380.9 477 49.1
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 1.8e-103 380.6 473 45.9
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 2.3e-103 380.2 473 46.9
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 2.6e-102 376.7 468 46.6
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 2.6e-102 376.7 467 45.8
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 7.5e-102 375.2 467 46.0
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 9.8e-102 374.8 342 57.9
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 1.3e-101 374.4 467 46.0
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 2.9e-101 373.2 468 45.7
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 4.9e-101 372.5 467 45.8
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 1.1e-100 371.3 467 45.4
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 1.9e-100 370.5 467 45.6
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 3.3e-97 359.8 467 44.3
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 2.8e-96 356.7 492 43.3
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 2.8e-96 356.7 431 44.5
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 2.0e-94 350.5 454 47.1
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 6.0e-91 339.0 454 43.8
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 5.1e-90 335.9 460 43.0
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 9.5e-89 331.6 445 44.9
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 2.8e-88 330.1 302 58.6
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 3.8e-85 319.7 461 41.2
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 1.2e-78 298.1 328 49.1
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 6.6e-74 282.3 462 39.2
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 6.0e-67 259.2 466 38.0
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 6.7e-58 229.2 322 43.2
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 1.2e-46 191.8 371 36.4
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 5.9e-46 189.5 180 52.8
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 2.8e-40 170.6 227 47.6
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 7.7e-38 162.5 147 49.0
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 7.9e-35 152.5 132 53.0
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 6.7e-34 149.4 132 52.3
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 6.7e-34 149.4 132 52.3
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 3.5e-30 137.1 312 34.0
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 2.1e-27 127.9 137 53.3
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 4.7e-27 126.7 119 51.3
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 6.1e-27 126.3 120 53.3
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 8.8e-26 122.5 499 25.9
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.1e-23 115.5 164 36.6
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.1e-23 115.5 164 36.6
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.8e-23 114.8 267 32.2
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 3.8e-21 107.1 88 67.0
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 1.8e-18 98.2 431 24.4
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 2.3e-18 97.8 74 60.8
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 6.8e-18 96.3 458 26.9
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 1.2e-14 85.5 132 40.9
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 2.2e-13 81.3 55 70.9
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.1e-12 79.0 122 37.7
Actinidia07619 Actinidia chinensis HOM05D006143 ORTHO05D007587 4.7e-11 73.6 119 37.0
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 3.7e-08 63.9 114 32.5
arahy.Tifrunner.gnm1.ann1.SUI2IU Arachis hypogaea HOM05D006143 ORTHO05D007587 1.4e-07 62.0 57 52.6
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 9.1e-07 59.3 81 37.0
RcHm_v2.0_Chr3g0477111 Rosa chinensis HOM05D006143 ORTHO05D007587 1.2e-06 58.9 36 75.0
CSS0047646 Camellia sinensis var. sinensis HOM05D000493 ORTHO05D001638 1.6e-06 58.5 65 55.4


User provided reference genes

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