Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 9.0e-157 557.0 305 100.0
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 8.3e-118 427.6 242 99.2
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 2.3e-107 392.9 303 76.6
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 3.3e-106 389.0 270 81.9
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 8.3e-102 374.4 356 63.2
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 6.8e-96 354.8 240 82.5
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 1.0e-91 340.9 260 74.2
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 3.9e-91 339.0 261 69.7
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 7.3e-90 334.7 242 71.9
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 5.2e-88 328.6 240 77.5
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 1.3e-86 323.9 245 73.1
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 5.4e-85 318.5 300 60.7
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 1.2e-84 317.4 259 69.9
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 1.2e-84 317.4 255 66.7
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 2.1e-84 316.6 248 73.8
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 2.5e-82 309.7 231 69.3
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 3.3e-82 309.3 260 66.5
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 1.1e-80 304.3 234 76.5
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 2.4e-80 303.1 224 73.7
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 4.0e-80 302.4 221 69.2
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 5.2e-80 302.0 236 68.2
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 1.2e-79 300.8 304 63.8
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 1.5e-79 300.4 302 63.9
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 7.6e-79 298.1 266 64.3
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 8.4e-78 294.7 244 69.3
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 1.9e-77 293.5 255 65.1
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 1.6e-76 290.4 303 61.7
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 4.6e-76 288.9 249 68.7
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 4.6e-76 288.9 251 63.3
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 6.0e-76 288.5 297 63.3
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 1.3e-75 287.3 236 66.5
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 1.3e-75 287.3 254 70.1
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 3.9e-75 285.8 232 70.3
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 8.7e-75 284.6 261 64.4
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 1.5e-74 283.9 272 66.2
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 1.9e-74 283.5 273 60.4
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 2.5e-74 283.1 257 60.3
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 7.3e-74 281.6 294 55.4
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 1.3e-73 280.8 260 62.7
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 2.1e-73 280.0 258 62.4
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 6.2e-73 278.5 236 64.4
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 6.2e-73 278.5 236 64.4
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 6.2e-73 278.5 236 64.4
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 8.1e-73 278.1 302 61.6
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 1.1e-72 277.7 236 64.4
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 1.1e-72 277.7 173 84.4
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 1.8e-72 276.9 252 67.9
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 3.1e-72 276.2 236 64.0
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 1.5e-71 273.9 232 63.4
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 1.5e-71 273.9 236 70.3
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 7.6e-71 271.6 303 53.8
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 1.3e-70 270.8 225 72.9
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 2.2e-70 270.0 245 59.6
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 4.9e-70 268.9 222 73.0
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 1.4e-69 267.3 239 68.6
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 1.4e-69 267.3 199 65.8
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 1.4e-69 267.3 246 59.8
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 4.2e-69 265.8 238 68.9
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 4.2e-69 265.8 252 65.9
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 9.3e-69 264.6 296 60.8
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 9.3e-69 264.6 296 60.8
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 9.3e-69 264.6 256 59.8
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 2.7e-68 263.1 256 59.8
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 7.9e-68 261.5 266 60.2
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 1.0e-67 261.2 248 60.5
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 1.0e-67 261.2 303 57.8
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 3.9e-67 259.2 231 68.0
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 1.9e-66 256.9 276 56.2
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 2.5e-66 256.5 309 56.3
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 3.3e-66 256.1 299 57.9
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 3.3e-66 256.1 234 68.4
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 2.1e-65 253.4 192 72.9
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 2.8e-65 253.1 163 77.9
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 3.7e-65 252.7 256 57.8
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 8.1e-65 251.5 243 66.3
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 2.4e-64 250.0 232 60.8
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 7.6e-63 245.0 274 53.3
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 9.9e-63 244.6 273 53.1
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 2.9e-62 243.0 230 67.0
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 8.4e-62 241.5 244 63.1
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 5.5e-61 238.8 235 63.8
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 2.1e-60 236.9 307 48.5
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 2.7e-60 236.5 232 62.9
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 3.0e-59 233.0 199 63.8
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 8.7e-59 231.5 265 62.3
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 3.3e-58 229.6 303 47.9
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 9.6e-58 228.0 304 51.6
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 8.2e-57 224.9 226 52.7
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 9.0e-56 221.5 230 62.6
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 2.6e-55 219.9 198 61.1
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 7.6e-55 218.4 258 47.7
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 6.5e-54 215.3 259 56.8
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 1.9e-53 213.8 231 59.7
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 4.2e-53 212.6 247 57.5
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 9.3e-53 211.5 222 57.7
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 1.8e-51 207.2 225 63.6
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 3.9e-51 206.1 241 60.6
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 5.7e-50 202.2 216 57.4
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 7.4e-50 201.8 198 65.7
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 8.2e-49 198.4 220 55.0
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 1.1e-45 188.0 263 45.2
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 7.2e-45 185.3 164 61.0
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 1.0e-43 181.4 224 51.8
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 2.5e-42 176.8 122 66.4
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 6.5e-38 162.2 144 56.2
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 9.4e-37 158.3 120 72.5
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 6.1e-36 155.6 246 49.6
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 2.0e-34 150.6 231 46.3
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 2.6e-34 150.2 107 72.9
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 1.7e-30 137.5 271 38.7
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 6.5e-30 135.6 224 39.7
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 3.2e-29 133.3 113 58.4
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 8.2e-25 118.6 107 71.0
QL08p032503 Quercus lobata HOM05D006314 ORTHO05D030082 9.4e-21 105.1 81 70.4
QL05p075461 Quercus lobata HOM05D006314 ORTHO05D030082 1.2e-18 98.2 53 84.9
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 1.5e-18 97.8 213 36.2
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 1.8e-16 90.9 120 50.0
QL08p032427 Quercus lobata HOM05D006314 ORTHO05D030082 6.5e-14 82.4 63 69.8
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 2.7e-12 77.0 96 42.7
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 3.6e-12 76.6 39 87.2
Sp7g19320 Schrenkiella parvula HOM05D006314 ORTHO05D007970 3.4e-10 70.1 190 30.0
MD10G1313900 Malus domestica HOM05D006314 ORTHO05D030082 7.5e-10 68.9 51 62.7
MD10G1314000 Malus domestica HOM05D006314 ORTHO05D007970 7.7e-07 58.9 36 72.2


User provided reference genes

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