Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 7.3e-131 470.7 260 100.0
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 1.9e-118 429.5 242 99.2
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 9.6e-99 364.0 240 84.2
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 3.6e-98 362.1 242 82.6
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 1.2e-93 347.1 240 81.7
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 2.7e-93 345.9 256 74.6
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 2.5e-91 339.3 256 69.1
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 4.3e-91 338.6 285 66.3
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 1.1e-89 334.0 242 71.5
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 4.0e-89 332.0 240 77.5
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 1.3e-87 327.0 237 74.7
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 7.1e-86 321.2 240 72.9
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 7.1e-86 321.2 255 66.7
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 2.7e-85 319.3 276 63.8
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 1.0e-84 317.4 254 72.0
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 3.3e-83 312.4 251 68.1
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 4.3e-83 312.0 231 69.3
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 1.4e-81 307.0 234 76.5
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 3.1e-81 305.8 224 73.7
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 5.3e-81 305.1 221 69.2
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 6.9e-81 304.7 236 68.2
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 2.9e-79 299.3 231 75.8
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 3.8e-79 298.9 243 72.0
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 8.4e-79 297.7 254 67.3
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 1.4e-78 297.0 224 71.4
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 1.9e-78 296.6 250 66.4
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 7.1e-78 294.7 238 70.2
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 1.0e-76 290.8 252 68.7
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 1.0e-76 290.8 245 63.3
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 1.8e-76 290.0 236 66.5
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 2.3e-76 289.7 259 66.0
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 2.5e-75 286.2 236 71.6
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 4.3e-75 285.4 238 71.8
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 5.7e-75 285.0 258 64.0
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 5.7e-75 285.0 222 66.2
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 9.7e-75 284.3 233 72.5
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 9.7e-75 284.3 233 66.5
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 1.6e-74 283.5 240 65.0
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 2.1e-74 283.1 246 63.0
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 2.1e-74 283.1 250 69.2
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 8.2e-74 281.2 236 64.4
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 8.2e-74 281.2 236 64.4
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 8.2e-74 281.2 236 64.4
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 1.4e-73 280.4 236 64.4
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 1.4e-73 280.4 173 84.4
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 1.8e-73 280.0 236 65.7
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 4.1e-73 278.9 236 64.0
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 1.2e-72 277.3 232 63.4
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 2.0e-72 276.6 236 70.3
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 2.6e-72 276.2 242 63.2
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 2.6e-72 276.2 234 70.5
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 7.6e-72 274.6 248 60.1
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 1.0e-71 274.2 242 68.6
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 1.0e-71 274.2 223 73.1
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 1.7e-71 273.5 225 72.9
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 2.9e-71 272.7 245 59.6
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 3.8e-71 272.3 189 67.7
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 1.4e-70 270.4 253 66.8
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 3.2e-70 269.2 268 59.0
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 3.2e-70 269.2 225 71.1
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 9.3e-70 267.7 268 59.0
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 3.6e-69 265.8 241 67.6
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 3.6e-69 265.8 241 67.6
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 1.8e-68 263.5 240 64.2
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 1.8e-68 263.5 236 65.7
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 3.0e-68 262.7 265 58.1
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 8.7e-68 261.2 276 56.5
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 1.5e-67 260.4 241 65.1
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 1.9e-67 260.0 251 65.3
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 4.3e-67 258.8 232 67.7
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 3.7e-66 255.8 163 77.9
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 3.7e-66 255.8 260 63.5
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 1.4e-65 253.8 230 61.7
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 1.4e-65 253.8 232 60.8
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 6.9e-65 251.5 214 70.6
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 6.9e-65 251.5 172 77.3
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 7.7e-64 248.1 224 60.3
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 1.7e-63 246.9 224 60.7
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 3.8e-63 245.7 247 62.3
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 6.5e-63 245.0 224 67.9
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 1.4e-62 243.8 234 63.2
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 1.4e-62 243.8 224 66.1
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 3.0e-60 236.1 199 63.8
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 1.7e-58 230.3 239 54.4
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 4.8e-58 228.8 248 50.0
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 1.1e-57 227.6 226 52.7
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 1.8e-57 226.9 200 61.5
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 4.1e-57 225.7 198 72.2
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 6.9e-57 224.9 230 58.3
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 9.1e-57 224.6 255 52.9
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 9.1e-57 224.6 230 62.6
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 1.7e-55 220.3 224 62.1
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 2.5e-54 216.5 231 59.7
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 7.2e-54 214.9 230 60.4
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 1.2e-53 214.2 222 57.7
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 1.0e-52 211.1 227 63.0
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 1.4e-52 210.7 226 63.3
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 3.0e-52 209.5 204 65.2
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 6.3e-50 201.8 225 56.4
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 1.1e-49 201.1 220 55.0
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 1.3e-47 194.1 234 48.3
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 1.2e-45 187.6 164 61.0
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 1.4e-44 184.1 224 51.8
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 1.7e-42 177.2 122 66.4
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 8.5e-39 164.9 144 56.9
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 8.0e-37 158.3 120 72.5
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 2.6e-35 153.3 231 46.3
Sed0025568 Sechium edule HOM05D006314 ORTHO05D007970 4.4e-35 152.5 233 50.2
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 2.2e-34 150.2 107 72.9
MSTRG.16127 Avicennia marina HOM05D006314 ORTHO05D007970 2.0e-32 143.7 127 56.7
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 2.7e-32 143.3 266 39.8
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 1.9e-30 137.1 242 38.0
CSS0018641 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 1.4e-25 120.9 107 71.0
QL05p075461 Quercus lobata HOM05D006314 ORTHO05D030082 1.5e-19 100.9 54 85.2
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 3.4e-19 99.8 231 34.6
QL08p032503 Quercus lobata HOM05D006314 ORTHO05D030082 8.3e-18 95.1 51 86.3
Os07g0134400 Oryza sativa ssp. japonica HOM05D006314 ORTHO05D007970 1.0e-15 88.2 109 49.5
Lsat_1_v5_gn_5_88320 Lactuca sativa HOM05D006314 ORTHO05D007970 2.1e-13 80.5 99 42.4
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 2.8e-13 80.1 43 81.4
Sp7g19320 Schrenkiella parvula HOM05D006314 ORTHO05D007970 2.9e-10 70.1 190 30.0
MD10G1313900 Malus domestica HOM05D006314 ORTHO05D030082 3.7e-10 69.7 52 61.5
QL08p032427 Quercus lobata HOM05D006314 ORTHO05D030082 3.0e-07 60.1 33 81.8
MD10G1314000 Malus domestica HOM05D006314 ORTHO05D007970 6.6e-07 58.9 36 72.2
FvH4_3g02750 Fragaria vesca HOM05D006314 ORTHO05D007970 2.5e-06 57.0 43 65.1


User provided reference genes

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