Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 5.4e-184 647.5 325 100.0
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 1.4e-136 490.0 324 76.9
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 6.1e-127 458.0 321 71.3
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 3.8e-121 438.7 323 69.7
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 2.3e-110 402.9 322 64.3
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 3.0e-110 402.5 317 65.6
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 5.2e-110 401.7 324 66.4
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 4.9e-108 395.2 322 64.9
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 9.2e-107 391.0 322 62.1
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 1.2e-106 390.6 322 64.3
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 3.5e-106 389.0 323 60.1
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 4.5e-106 388.7 321 61.7
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 2.3e-105 386.3 328 63.1
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 2.9e-105 386.0 317 60.6
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 5.0e-105 385.2 320 59.7
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 6.6e-105 384.8 323 63.5
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 1.1e-104 384.0 321 60.4
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 2.5e-104 382.9 346 61.3
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 3.3e-104 382.5 320 60.0
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 1.4e-102 377.1 321 59.2
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 1.5e-101 373.6 322 60.9
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 5.7e-101 371.7 320 59.7
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 5.7e-101 371.7 322 60.2
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 9.8e-101 370.9 320 58.4
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 2.2e-100 369.8 320 58.1
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 6.4e-100 368.2 321 58.9
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 6.4e-100 368.2 321 61.7
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 8.3e-100 367.9 321 58.9
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 2.4e-99 366.3 321 61.4
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 1.2e-98 364.0 367 53.4
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 1.0e-97 360.9 323 60.4
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 1.7e-97 360.1 337 57.6
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 5.6e-96 355.1 323 59.4
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 1.2e-95 354.0 323 59.4
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 1.6e-95 353.6 325 56.3
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 2.1e-95 353.2 320 60.0
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 2.8e-95 352.8 318 57.9
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 1.0e-94 350.9 334 56.9
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 1.8e-94 350.1 316 55.7
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 1.2e-93 347.4 341 54.3
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 3.4e-93 345.9 319 58.3
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 5.8e-93 345.1 319 58.3
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 9.8e-93 344.4 323 58.5
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 1.3e-92 344.0 319 58.0
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 1.7e-92 343.6 319 57.7
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 8.3e-92 341.3 337 55.2
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 1.1e-91 340.9 321 56.4
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 1.1e-91 340.9 320 58.8
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 1.4e-91 340.5 317 58.7
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 3.2e-91 339.3 319 58.0
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 1.6e-90 337.0 318 56.0
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 3.5e-90 335.9 321 56.7
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 3.5e-90 335.9 325 54.8
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 3.5e-90 335.9 316 55.1
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 3.5e-90 335.9 322 55.0
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 4.6e-90 335.5 314 55.4
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 1.0e-89 334.3 317 56.5
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 1.3e-89 334.0 335 52.8
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 1.3e-89 334.0 328 52.7
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 6.6e-89 331.6 322 54.3
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 4.7e-87 325.5 340 54.1
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 6.8e-86 321.6 354 51.7
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 6.8e-86 321.6 339 51.6
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 2.6e-85 319.7 317 53.0
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 4.9e-84 315.5 264 63.6
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 2.4e-83 313.2 350 51.4
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 3.5e-82 309.3 342 49.1
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 3.3e-80 302.8 316 52.2
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 7.3e-80 301.6 322 53.7
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 1.2e-79 300.8 318 49.4
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 1.2e-79 300.8 321 53.6
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 3.6e-79 299.3 265 58.5
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 4.7e-79 298.9 307 53.1
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 1.1e-75 287.7 319 49.2
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 5.4e-75 285.4 336 47.9
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 2.7e-74 283.1 304 52.0
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 6.0e-74 282.0 324 51.5
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 7.8e-74 281.6 327 47.1
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 1.7e-73 280.4 197 69.0
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 1.5e-72 277.3 339 46.0
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 1.9e-72 276.9 304 51.0
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 3.3e-72 276.2 339 45.7
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 3.6e-71 272.7 283 51.9
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 7.6e-69 265.0 317 49.8
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 2.4e-67 260.0 219 59.8
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 3.5e-66 256.1 317 49.2
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 3.5e-66 256.1 215 60.9
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 7.8e-66 255.0 318 48.4
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 7.8e-66 255.0 318 48.4
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 1.0e-65 254.6 317 46.7
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 1.0e-65 254.6 346 45.1
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 1.3e-65 254.2 315 47.3
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 1.7e-65 253.8 315 49.5
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 1.7e-65 253.8 321 48.6
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 2.3e-65 253.4 308 47.4
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 3.9e-65 252.7 315 48.3
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 5.6e-64 248.8 315 48.3
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 1.3e-63 247.7 344 46.2
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 2.4e-62 243.4 294 46.3
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 2.4e-62 243.4 259 50.6
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 3.4e-61 239.6 234 53.0
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 4.5e-61 239.2 346 45.1
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 1.1e-59 234.6 200 62.0
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 9.3e-59 231.5 217 58.1
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 1.6e-58 230.7 226 54.4
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 1.2e-53 214.5 206 55.8
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 2.4e-51 206.8 200 54.0
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 1.1e-48 198.0 199 55.8
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 1.5e-48 197.6 208 51.9
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 3.1e-46 189.9 195 50.8
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 2.2e-44 183.7 193 49.7
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 3.8e-44 183.0 145 60.7
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 3.2e-43 179.9 237 45.6
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 1.0e-41 174.9 227 44.1
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 7.4e-40 168.7 260 38.5
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 6.3e-39 165.6 124 63.7
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.8e-38 164.1 227 43.6
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.5e-37 161.0 228 42.1
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 2.2e-36 157.1 194 41.2
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 2.1e-34 150.6 120 59.2
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 4.6e-34 149.4 129 61.2
MCO01G157 Micromonas commoda HOM05D005236 ORTHO05D006557 3.9e-25 119.8 179 41.3
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 2.0e-21 107.5 79 68.4
Actinidia35535 Actinidia chinensis HOM05D006444 ORTHO05D007748 1.3e-20 104.8 71 73.2
SEGI_25648 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 2.0e-08 64.3 130 35.4


User provided reference genes

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