Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G158200 Carya illinoinensis HOM05D005111 ORTHO05D006650 1.4e-99 366.3 184 100.0
CiPaw.03G035600 Carya illinoinensis HOM05D005111 ORTHO05D006650 1.7e-78 296.2 184 78.8
CiPaw.04G023100 Carya illinoinensis HOM05D005111 ORTHO05D006650 1.6e-76 289.7 184 78.8
Cfa007459 Carpinus fangiana HOM05D005111 ORTHO05D006650 8.9e-75 283.9 184 76.6
Hma1.2p1_0697F.1_g204930 Hydrangea macrophylla HOM05D005111 ORTHO05D006650 1.7e-73 279.6 184 74.5
Haze_14637 Corylus avellana HOM05D005111 ORTHO05D006650 2.9e-73 278.9 178 77.0
CSS0013590 Camellia sinensis var. sinensis HOM05D005111 ORTHO05D006650 1.4e-72 276.6 184 73.9
Prupe.3G280400 Prunus persica HOM05D005111 ORTHO05D006650 4.1e-72 275.0 184 72.3
MD17G1038600 Malus domestica HOM05D005111 ORTHO05D006650 7.1e-72 274.2 184 71.7
Dinv35035 Davidia involucrata HOM05D005111 ORTHO05D006650 2.1e-71 272.7 184 73.4
MD09G1037200 Malus domestica HOM05D005111 ORTHO05D006650 2.1e-71 272.7 184 71.2
Lj7P412T18 Lonicera japonica HOM05D005111 ORTHO05D006650 3.5e-71 271.9 182 72.0
ECA246G3776 Erigeron canadensis HOM05D005111 ORTHO05D006650 4.6e-71 271.6 184 71.2
QL02p077635 Quercus lobata HOM05D005111 ORTHO05D006650 4.6e-71 271.6 183 71.6
Actinidia28460 Actinidia chinensis HOM05D005111 ORTHO05D006650 7.8e-71 270.8 184 70.7
Actinidia36066 Actinidia chinensis HOM05D005111 ORTHO05D006650 7.8e-71 270.8 184 70.7
Dinv33518 Davidia involucrata HOM05D005111 ORTHO05D006650 7.8e-71 270.8 184 72.3
Lsat_1_v5_gn_8_69941 Lactuca sativa HOM05D005111 ORTHO05D006650 1.3e-70 270.0 184 70.7
TAR622G0537 Trochodendron aralioides HOM05D005111 ORTHO05D006650 1.3e-70 270.0 184 71.7
Nn3g16957 Nelumbo nucifera HOM05D005111 ORTHO05D006650 2.3e-70 269.2 184 69.0
HanXRQChr15g0474461 Helianthus annuus HOM05D005111 ORTHO05D006650 3.0e-70 268.9 180 71.7
GSVIVG01032518001 Vitis vinifera HOM05D005111 ORTHO05D006650 3.0e-70 268.9 184 70.7
RcHm_v2.0_Chr2g0170641 Rosa chinensis HOM05D005111 ORTHO05D006650 5.1e-70 268.1 184 70.1
TWI56G1475 Tripterygium wilfordii HOM05D005111 ORTHO05D006650 5.1e-70 268.1 184 69.6
ClCG09G018710 Citrullus lanatus HOM05D005111 ORTHO05D006650 8.6e-70 267.3 184 69.6
ClCG09G018770 Citrullus lanatus HOM05D005111 ORTHO05D006650 8.6e-70 267.3 184 69.6
Sed0025070 Sechium edule HOM05D005111 ORTHO05D006650 1.1e-69 266.9 184 70.1
FAN02G1641 Fragaria x ananassa HOM05D005111 ORTHO05D006650 1.5e-69 266.5 184 68.5
Nitab4.5_0000844g0360 Nicotiana tabacum HOM05D005111 ORTHO05D006650 1.5e-69 266.5 184 70.1
FAN05G4920 Fragaria x ananassa HOM05D005111 ORTHO05D006650 1.9e-69 266.2 184 68.5
FAN09G2278 Fragaria x ananassa HOM05D005111 ORTHO05D006650 2.5e-69 265.8 184 68.5
Nitab4.5_0000632g0170 Nicotiana tabacum HOM05D005111 ORTHO05D006650 2.5e-69 265.8 182 70.3
CAN.G809.38 Capsicum annuum HOM05D005111 ORTHO05D006650 3.3e-69 265.4 182 69.2
Gorai.006G028500 Gossypium raimondii HOM05D005111 ORTHO05D006650 4.3e-69 265.0 180 70.6
Sed0001363 Sechium edule HOM05D005111 ORTHO05D006650 4.3e-69 265.0 184 69.6
Atru.chr6.2171 Acer truncatum HOM05D005111 ORTHO05D006650 7.3e-69 264.2 184 69.0
CANSAT64G0323 Cannabis sativa HOM05D005111 ORTHO05D006650 7.3e-69 264.2 184 69.6
Oeu047328.1 Olea europaea HOM05D005111 ORTHO05D006650 7.3e-69 264.2 182 68.7
MELO3C021519.2 Cucumis melo HOM05D005111 ORTHO05D006650 9.6e-69 263.8 184 69.0
CsaV3_5G037360 Cucumis sativus L. HOM05D005111 ORTHO05D006650 9.6e-69 263.8 184 69.0
Nn4g22869 Nelumbo nucifera HOM05D005111 ORTHO05D006650 1.6e-68 263.1 184 66.8
Sopen02g026580 Solanum pennellii HOM05D005111 ORTHO05D006650 1.6e-68 263.1 182 68.7
Solyc02g081950.4 Solanum lycopersicum HOM05D005111 ORTHO05D006650 2.1e-68 262.7 182 68.1
TWI36G0044 Tripterygium wilfordii HOM05D005111 ORTHO05D006650 2.1e-68 262.7 184 69.0
Gohir.D09G024300 Gossypium hirsutum HOM05D005111 ORTHO05D006650 3.6e-68 261.9 180 69.4
PGSC0003DMG400007321 Solanum tuberosum HOM05D005111 ORTHO05D006650 3.6e-68 261.9 182 68.1
COL.COLO4_32007 Corchorus olitorius HOM05D005111 ORTHO05D006650 4.7e-68 261.5 184 69.0
DCAR_013972 Daucus carota HOM05D005111 ORTHO05D006650 1.4e-67 260.0 182 68.7
Thecc.04G004900 Theobroma cacao HOM05D005111 ORTHO05D006650 1.4e-67 260.0 184 68.5
Potri.001G350300 Populus trichocarpa HOM05D005111 ORTHO05D006650 1.8e-67 259.6 181 68.5
AUR62032092 Chenopodium quinoa HOM05D005111 ORTHO05D006650 2.4e-67 259.2 180 68.3
Duzib147G1596 Durio zibethinus HOM05D005111 ORTHO05D006650 3.1e-67 258.8 184 67.9
TAR374G1688 Trochodendron aralioides HOM05D005111 ORTHO05D006650 3.1e-67 258.8 182 69.8
Gohir.D04G053100 Gossypium hirsutum HOM05D005111 ORTHO05D006650 4.0e-67 258.5 182 68.1
Gorai.012G059600 Gossypium raimondii HOM05D005111 ORTHO05D006650 4.0e-67 258.5 182 68.1
Cc07_g02510 Coffea canephora HOM05D005111 ORTHO05D006650 5.2e-67 258.1 178 70.2
FvH4_6g50340 Fragaria vesca HOM05D005111 ORTHO05D006650 5.2e-67 258.1 177 68.9
FAN14G5899 Fragaria x ananassa HOM05D005111 ORTHO05D006650 5.2e-67 258.1 177 68.9
Sabra16G0229800 Salix brachista HOM05D005111 ORTHO05D006650 6.8e-67 257.7 181 68.5
THA.LOC104823919 Tarenaya hassleriana HOM05D005111 ORTHO05D006650 6.8e-67 257.7 184 69.0
MSTRG.15504 Avicennia marina HOM05D005111 ORTHO05D006650 8.9e-67 257.3 178 70.2
MSTRG.3306 Avicennia marina HOM05D005111 ORTHO05D006650 8.9e-67 257.3 178 71.3
Ciclev10016872m.g Citrus clementina HOM05D005111 ORTHO05D006650 8.9e-67 257.3 184 66.8
Manes.15G180000 Manihot esculenta HOM05D005111 ORTHO05D006650 8.9e-67 257.3 184 68.5
Peaxi162Scf00036g00163 Petunia axillaris HOM05D005111 ORTHO05D006650 1.5e-66 256.5 182 67.6
PGR083G2413 Punica granatum HOM05D005111 ORTHO05D006650 2.0e-66 256.1 185 68.1
Rhsim08G0056700 Rhododendron simsii HOM05D005111 ORTHO05D006650 2.0e-66 256.1 184 66.8
Gohir.A05G361100 Gossypium hirsutum HOM05D005111 ORTHO05D006650 2.6e-66 255.8 182 67.0
Nitab4.5_0000005g0410 Nicotiana tabacum HOM05D005111 ORTHO05D006650 2.6e-66 255.8 182 68.1
SalBow1G6258 Salvia bowleyana HOM05D005111 ORTHO05D006650 2.6e-66 255.8 177 68.9
Duzib264G0177 Durio zibethinus HOM05D005111 ORTHO05D006650 3.4e-66 255.4 184 67.4
Nitab4.5_0000389g0080 Nicotiana tabacum HOM05D005111 ORTHO05D006650 4.4e-66 255.0 182 67.6
Gohir.A10G101300 Gossypium hirsutum HOM05D005111 ORTHO05D006650 5.8e-66 254.6 184 65.8
CDE10G0493 Ceratophyllum demersum HOM05D005111 ORTHO05D006650 9.9e-66 253.8 184 65.2
Gohir.D10G087701 Gossypium hirsutum HOM05D005111 ORTHO05D006650 1.3e-65 253.4 184 64.7
Gorai.011G096000 Gossypium raimondii HOM05D005111 ORTHO05D006650 1.3e-65 253.4 184 64.7
Aa31LG2G4740 Aethionema arabicum HOM05D005111 ORTHO05D006650 2.2e-65 252.7 184 66.3
Hma1.2p1_0967F.1_g242385 Hydrangea macrophylla HOM05D005111 ORTHO05D006650 3.8e-65 251.9 184 66.3
Manes.17G124400 Manihot esculenta HOM05D005111 ORTHO05D006650 6.4e-65 251.1 184 65.2
Ah.16g106920 Amaranthus hybridus HOM05D005111 ORTHO05D006650 8.4e-65 250.8 184 64.7
Hma1.2p1_2931F.1_g330500 Hydrangea macrophylla HOM05D005111 ORTHO05D006650 1.1e-64 250.4 184 65.8
Sp2g17070 Schrenkiella parvula HOM05D005111 ORTHO05D006650 1.4e-64 250.0 184 65.2
VMungo0464G0112 Vigna mungo HOM05D005111 ORTHO05D006650 3.2e-64 248.8 185 65.9
CDE10G0889 Ceratophyllum demersum HOM05D004213 ORTHO05D005091 7.1e-64 247.7 177 65.5
Migut.H00147 Erythranthe guttata HOM05D005111 ORTHO05D006650 7.1e-64 247.7 178 66.3
Thhalv10005667m.g Eutrema salsugineum HOM05D005111 ORTHO05D006650 7.1e-64 247.7 184 64.7
EL10Ac2g03364 Beta vulgaris HOM05D005111 ORTHO05D006650 9.3e-64 247.3 178 66.9
BcaC06g33750 Brassica carinata HOM05D005111 ORTHO05D006650 1.2e-63 246.9 182 65.4
C07p37330 Brassica napus HOM05D005111 ORTHO05D006650 1.2e-63 246.9 182 65.4
BolC7t44243H Brassica oleracea HOM05D005111 ORTHO05D006650 1.2e-63 246.9 182 65.4
unitig_744.g24353 Utricularia gibba HOM05D005111 ORTHO05D006650 1.2e-63 246.9 179 67.0
Potri.017G073800 Populus trichocarpa HOM05D005111 ORTHO05D006650 2.7e-63 245.7 185 66.5
Phvul.004G019100 Phaseolus vulgaris HOM05D005111 ORTHO05D006650 4.6e-63 245.0 185 64.3
THA.LOC104805409 Tarenaya hassleriana HOM05D005111 ORTHO05D006650 6.0e-63 244.6 180 66.1
Eucgr.J02178 Eucalyptus grandis HOM05D005111 ORTHO05D006650 1.0e-62 243.8 184 60.9
AL7G49820 Arabidopsis lyrata HOM05D005111 ORTHO05D006650 1.7e-62 243.0 184 63.0
Glyma.13G070800 Glycine max HOM05D005111 ORTHO05D006650 2.3e-62 242.7 182 64.8
SGA_v2.0_scaffold205G41716 Striga asiatica HOM05D005111 ORTHO05D006650 2.3e-62 242.7 178 64.0
Glyma.19G011900 Glycine max HOM05D005111 ORTHO05D006650 3.0e-62 242.3 187 64.7
AL5G17640 Arabidopsis lyrata HOM05D005111 ORTHO05D006650 3.9e-62 241.9 183 63.9
VMungo0464G1864 Vigna mungo HOM05D005111 ORTHO05D006650 3.9e-62 241.9 185 64.3
Thhalv10027951m.g Eutrema salsugineum HOM05D005111 ORTHO05D006650 5.1e-62 241.5 180 63.9
Lj2g0005029 Lotus japonicus HOM05D005111 ORTHO05D006650 5.1e-62 241.5 177 63.3
Glyma.19G012000 Glycine max HOM05D005111 ORTHO05D006650 6.6e-62 241.1 183 65.6
Phvul.004G019200 Phaseolus vulgaris HOM05D005111 ORTHO05D006650 6.6e-62 241.1 185 63.8
A06p40670 Brassica napus HOM05D005111 ORTHO05D006650 1.1e-61 240.4 182 63.2
BraA06t26987Z Brassica rapa HOM05D005111 ORTHO05D006650 1.1e-61 240.4 182 63.2
SalBow7G0796 Salvia bowleyana HOM05D005111 ORTHO05D006650 1.1e-61 240.4 177 66.1
BcaC06g30932 Brassica carinata HOM05D005111 ORTHO05D006650 1.5e-61 240.0 193 62.2
PSO478G1103 Papaver somniferum HOM05D005111 ORTHO05D006650 1.5e-61 240.0 184 64.1
AT5G40190 Arabidopsis thaliana HOM05D005111 ORTHO05D006650 2.5e-61 239.2 184 61.4
Aqoxy3G00932 Aquilegia oxysepala HOM05D005111 ORTHO05D006650 4.3e-61 238.4 181 61.3
CARHR261950 Cardamine hirsuta HOM05D005111 ORTHO05D006650 1.6e-60 236.5 184 61.4
SEGI_23218 Sequoiadendron giganteum HOM05D005111 ORTHO05D006650 1.6e-60 236.5 182 59.9
SGA_v2.0_scaffold30G12485 Striga asiatica HOM05D005111 ORTHO05D006650 1.6e-60 236.5 178 63.5
PSO017G5141 Papaver somniferum HOM05D005111 ORTHO05D006650 3.6e-60 235.3 184 63.0
Actinidia33968 Actinidia chinensis HOM05D005111 ORTHO05D000390 4.8e-60 235.0 184 62.0
Carub.0007s3546 Capsella rubella HOM05D005111 ORTHO05D006650 8.1e-60 234.2 184 60.9
AT3G28140 Arabidopsis thaliana HOM05D005111 ORTHO05D006650 5.3e-59 231.5 185 62.2
Carub.0005s0666 Capsella rubella HOM05D005111 ORTHO05D006650 1.2e-58 230.3 177 65.0
Aqoxy3G03068 Aquilegia oxysepala HOM05D005111 ORTHO05D006650 2.0e-58 229.6 182 61.0
Migut.K01364 Erythranthe guttata HOM05D005111 ORTHO05D006650 2.0e-58 229.6 179 62.0
arahy.Tifrunner.gnm1.ann1.68QD6J Arachis hypogaea HOM05D005111 ORTHO05D006650 3.4e-58 228.8 179 63.7
TPR.G2260 Trifolium pratense HOM05D005111 ORTHO05D006650 5.4e-56 221.5 179 60.9
Sc20g0002810 Simmondsia chinensis HOM05D005111 ORTHO05D006650 7.1e-56 221.1 170 63.5
Ca_04214_v3 Cicer arietinum L. HOM05D005111 ORTHO05D006650 1.6e-55 219.9 179 60.3
Psat1g060720 Pisum sativum HOM05D005111 ORTHO05D006650 6.0e-55 218.0 177 61.6
Sp7g01780 Schrenkiella parvula HOM05D005111 ORTHO05D006650 4.3e-53 211.8 180 59.4
Lalb_Chr02g0159721 Lupinus albus HOM05D005111 ORTHO05D006650 2.1e-52 209.5 186 55.4
Medtr6g007773 Medicago truncatula HOM05D005111 ORTHO05D006650 6.4e-49 198.0 179 55.3
ATR1149G112 Amborella trichopoda HOM05D005111 ORTHO05D006650 1.1e-48 197.2 189 54.0
Cpa.g.sc286.5 Carica papaya HOM05D005111 ORTHO05D006650 1.6e-44 183.3 165 57.6
BcaC06g30930 Brassica carinata HOM05D005111 ORTHO05D006650 2.8e-44 182.6 182 53.3
Os09g0375400 Oryza sativa ssp. japonica HOM05D005111 ORTHO05D006650 2.5e-40 169.5 184 50.5
Gohir.A09G025000 Gossypium hirsutum HOM05D005111 ORTHO05D006650 9.3e-40 167.5 116 69.0
FAN09G1763 Fragaria x ananassa HOM05D005111 ORTHO05D006650 2.3e-38 162.9 115 62.6
Zm00001eb098850 Zea mays HOM05D005111 ORTHO05D006650 1.6e-36 156.8 197 46.2
SMO367G0111 Selaginella moellendorffii HOM05D005111 ORTHO05D006650 7.6e-34 147.9 179 39.1
Ah.07g198430 Amaranthus hybridus HOM05D005111 ORTHO05D003582 2.9e-33 146.0 157 49.0
Actinidia27813 Actinidia chinensis HOM05D005111 ORTHO05D006650 7.9e-23 111.3 108 54.6
CARHR149780 Cardamine hirsuta HOM05D005111 ORTHO05D006650 7.9e-23 111.3 99 54.5
Nn8g40738 Nelumbo nucifera HOM05D005111 ORTHO05D006650 6.7e-22 108.2 76 69.7
Ciclev10033710m.g Citrus clementina HOM05D005111 ORTHO05D152558 3.1e-19 99.4 164 32.9
BcaC03g17502 Brassica carinata HOM05D005111 ORTHO05D039329 3.7e-12 75.9 57 64.9
A02p35780 Brassica napus HOM05D005111 ORTHO05D006650 7.2e-08 61.6 55 49.1
BraA02t08578Z Brassica rapa HOM05D000028 ORTHO05D000390 7.2e-08 61.6 55 49.1
BcaC06g33752 Brassica carinata HOM05D005111 ORTHO05D093848 1.4e-06 57.4 38 63.2


User provided reference genes

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