Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G151000 Carya illinoinensis HOM05D007305 ORTHO05D009886 1.2e-49 199.5 99 100.0
CiPaw.13G082800 Carya illinoinensis HOM05D023524 ORTHO05D000001 4.9e-27 124.4 64 95.3
CiPaw.06G060800 Carya illinoinensis HOM05D007305 ORTHO05D000001 1.2e-22 109.8 63 85.7
Oeu036242.1 Olea europaea HOM05D007305 ORTHO05D009886 5.2e-21 104.4 98 49.0
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 5.8e-20 100.9 98 50.0
vmacro05505 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 1.1e-18 96.7 98 50.0
vmacro08818 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 3.2e-18 95.1 98 49.0
vmacro23376 Vaccinium macrocarpon HOM05D001558 ORTHO05D003061 3.2e-18 95.1 98 49.0
vmacro11232 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 5.4e-18 94.4 98 49.0
vmacro13138 Vaccinium macrocarpon HOM05D001282 ORTHO05D009886 5.0e-16 87.8 98 43.9
vmacro10451 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 8.6e-16 87.0 98 45.9
vmacro12534 Vaccinium macrocarpon HOM05D000671 ORTHO05D004414 8.6e-16 87.0 98 42.9
vmacro14864 Vaccinium macrocarpon HOM05D001069 ORTHO05D009886 7.3e-15 84.0 98 42.9
vmacro00602 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 9.5e-15 83.6 95 45.3
vmacro07032 Vaccinium macrocarpon HOM05D030287 ORTHO05D018099 2.8e-14 82.0 98 39.8
Eucgr.G01582 Eucalyptus grandis HOM05D000002 ORTHO05D000047 6.2e-14 80.9 97 38.1
vmacro22644 Vaccinium macrocarpon HOM05D000083 ORTHO05D001732 6.2e-14 80.9 98 40.8
Sabra06G0016700 Salix brachista HOM05D000027 ORTHO05D000066 2.3e-13 79.0 98 38.8
Sabra07G0082100 Salix brachista HOM05D007305 ORTHO05D009886 2.3e-13 79.0 98 38.8
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 2.3e-13 79.0 98 38.8
Sabra16G0035300 Salix brachista HOM05D007305 ORTHO05D009886 2.3e-13 79.0 98 38.8
Sabra17G0125400 Salix brachista HOM05D007305 ORTHO05D009886 2.3e-13 79.0 98 38.8
Eucgr.H03782 Eucalyptus grandis HOM05D000002 ORTHO05D000047 4.0e-13 78.2 97 37.1
Sabra18G0102700 Salix brachista HOM05D007305 ORTHO05D009886 8.9e-13 77.0 98 37.8
vmacro17584 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 1.5e-12 76.3 71 50.7
Sabra04G0080000 Salix brachista HOM05D007305 ORTHO05D009886 2.0e-12 75.9 98 39.8
SHI11625 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-12 74.7 98 38.8
SHI27433 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-11 72.4 98 37.8
vmacro06545 Vaccinium macrocarpon HOM05D002963 ORTHO05D003302 3.7e-11 71.6 76 46.1
Manes.02G211261 Manihot esculenta HOM05D007305 ORTHO05D009886 8.3e-11 70.5 98 36.7
Sed0002096 Sechium edule HOM05D007305 ORTHO05D009886 1.1e-10 70.1 98 36.7
vmacro04977 Vaccinium macrocarpon HOM05D004351 ORTHO05D005196 1.1e-10 70.1 98 38.8
vmacro15092 Vaccinium macrocarpon HOM05D005784 ORTHO05D007803 1.4e-10 69.7 98 31.6
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 1.9e-10 69.3 98 31.6
Manes.06G147450 Manihot esculenta HOM05D007305 ORTHO05D009886 2.4e-10 68.9 98 34.7
vmacro05561 Vaccinium macrocarpon HOM05D001266 ORTHO05D001105 5.4e-10 67.8 76 44.7
Cpa.g.sc37.32 Carica papaya HOM05D007305 ORTHO05D009886 7.1e-10 67.4 98 32.7
Manes.15G035050 Manihot esculenta HOM05D007305 ORTHO05D009886 7.1e-10 67.4 98 34.7
SHI32606 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-10 67.0 92 38.0
TWI79G0335 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 1.2e-09 66.6 97 37.1
Manes.09G019650 Manihot esculenta HOM05D007305 ORTHO05D009886 1.6e-09 66.2 98 34.7
vmacro13137 Vaccinium macrocarpon HOM05D001282 ORTHO05D001236 2.1e-09 65.9 62 53.2
vmacro23149 Vaccinium macrocarpon HOM05D064014 ORTHO05D000047 2.1e-09 65.9 98 30.6
SHI23673 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-09 65.5 92 38.0
SHI34552 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-09 65.5 92 38.0
SHI14439 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-09 65.1 92 35.9
C07p24140 Brassica napus HOM05D000002 ORTHO05D000047 4.6e-09 64.7 92 38.0
SHI23844 Sapria himalayana HOM05D000002 ORTHO05D000001 6.0e-09 64.3 91 38.5
SHI32097 Sapria himalayana HOM05D000002 ORTHO05D000001 6.0e-09 64.3 92 37.0
SHI09331 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-08 63.5 92 38.0
SHI21519 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-08 63.5 92 37.0
SHI24277 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-08 63.2 92 39.1
vmacro19208 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 1.3e-08 63.2 98 33.7
vmacro23112 Vaccinium macrocarpon HOM05D005460 ORTHO05D008059 1.7e-08 62.8 98 36.7
Ciclev10017996m.g Citrus clementina HOM05D000002 ORTHO05D000047 2.3e-08 62.4 92 33.7
SHI15390 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-08 62.4 92 37.0
SHI16752 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-08 62.4 92 37.0
SHI24178 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-08 62.4 92 38.0
vmacro17637 Vaccinium macrocarpon HOM05D005460 ORTHO05D008059 2.3e-08 62.4 98 36.7
Manes.15G058801 Manihot esculenta HOM05D007305 ORTHO05D009886 3.0e-08 62.0 98 33.7
SHI09366 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-08 62.0 92 37.0
SHI34045 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-08 62.0 90 36.7
TWI56G0827 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 3.0e-08 62.0 92 34.8
SHI06777 Sapria himalayana HOM05D000002 ORTHO05D000001 3.9e-08 61.6 92 35.9
SHI15625 Sapria himalayana HOM05D000002 ORTHO05D000001 3.9e-08 61.6 89 37.1
SHI42928 Sapria himalayana HOM05D000002 ORTHO05D000001 3.9e-08 61.6 92 35.9
SHI43078 Sapria himalayana HOM05D000002 ORTHO05D000001 3.9e-08 61.6 92 35.9
PSO384G1714 Papaver somniferum HOM05D000002 ORTHO05D000047 5.1e-08 61.2 94 35.1
SHI25917 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-08 61.2 92 37.0
SHI27844 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-08 61.2 92 37.0
Oeu019665.1 Olea europaea HOM05D029785 ORTHO05D000001 6.6e-08 60.8 44 59.1
SHI06859 Sapria himalayana HOM05D000002 ORTHO05D000001 6.6e-08 60.8 92 34.8
SHI20230 Sapria himalayana HOM05D000002 ORTHO05D000001 6.6e-08 60.8 90 40.0
vmacro22188 Vaccinium macrocarpon HOM05D005356 ORTHO05D006596 6.6e-08 60.8 61 45.9
SHI14540 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-08 60.5 91 37.4
SHI17232 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-08 60.5 92 35.9
Ciclev10013723m.g Citrus clementina HOM05D000002 ORTHO05D000047 1.1e-07 60.1 92 39.1
SHI06528 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-07 60.1 92 35.9
SHI11777 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-07 60.1 92 35.9
SHI30603 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-07 60.1 92 35.9
MBI15_g12401_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000047 1.5e-07 59.7 93 36.6
Rhsim13G0000300 Rhododendron simsii HOM05D000002 ORTHO05D000047 1.5e-07 59.7 97 30.9
SHI05330 Sapria himalayana HOM05D001596 ORTHO05D000001 1.5e-07 59.7 92 34.8
SHI11377 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-07 59.7 90 36.7
SHI14291 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-07 59.7 92 37.0
SHI16945 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-07 59.7 92 37.0
SHI22147 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-07 59.7 92 37.0
MD10G1333400 Malus domestica HOM05D000002 ORTHO05D000047 1.9e-07 59.3 91 29.7
PSO675G4970 Papaver somniferum HOM05D000002 ORTHO05D000047 1.9e-07 59.3 94 35.1
RcHm_v2.0_Chr1g0322851 Rosa chinensis HOM05D000002 ORTHO05D000047 1.9e-07 59.3 94 31.9
RcHm_v2.0_Chr7g0192331 Rosa chinensis HOM05D000002 ORTHO05D000047 1.9e-07 59.3 94 31.9
SHI26413 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-07 59.3 92 35.9
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-07 59.3 90 40.0
SHI32977 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-07 59.3 99 36.4
MD08G1209000 Malus domestica HOM05D000103 ORTHO05D000049 2.5e-07 58.9 91 29.7
MD15G1053300 Malus domestica HOM05D000002 ORTHO05D000047 2.5e-07 58.9 91 29.7
PSO339G4703 Papaver somniferum HOM05D000002 ORTHO05D000001 2.5e-07 58.9 94 35.1
PSO732G0713 Papaver somniferum HOM05D000002 ORTHO05D000047 2.5e-07 58.9 94 34.0
SHI01243 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-07 58.9 91 37.4
SHI02940 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-07 58.9 92 35.9
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-07 58.9 78 41.0
SHI10616 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-07 58.9 92 37.0
SHI37970 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-07 58.9 92 37.0
TWI63G0245 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 2.5e-07 58.9 98 30.6
TWI74G0113 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 2.5e-07 58.9 98 30.6
TWI79G1645 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 2.5e-07 58.9 98 30.6
MBI03_g40517_MAGBIO Magnolia biondii HOM05D000002 ORTHO05D000047 3.3e-07 58.5 93 35.5
Oeu056823.1 Olea europaea HOM05D023524 ORTHO05D009886 3.3e-07 58.5 78 39.7
PGR142G0044 Punica granatum HOM05D000002 ORTHO05D000047 3.3e-07 58.5 95 35.8
SHI03814 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-07 58.5 87 37.9
SHI09975 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-07 58.5 92 35.9
SHI12017 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-07 58.5 92 35.9
SHI26125 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-07 58.5 78 41.0
SHI28205 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-07 58.5 92 34.8
SHI41210 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-07 58.5 92 37.0
SHI49078 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-07 58.5 86 39.5
TWI14G0936 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 3.3e-07 58.5 90 36.7
TWI74G0014 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 3.3e-07 58.5 90 36.7
TAR129G0002 Trochodendron aralioides HOM05D007305 ORTHO05D009886 3.3e-07 58.5 83 30.1
Eucgr.K01677 Eucalyptus grandis HOM05D000886 ORTHO05D000525 4.3e-07 58.2 97 33.0
Oeu039833.1 Olea europaea HOM05D000002 ORTHO05D000047 4.3e-07 58.2 93 35.5
SHI22311 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-07 58.2 92 35.9
SEGI_10748 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.3e-07 58.2 94 29.8
MD07G1078600 Malus domestica HOM05D000002 ORTHO05D000047 5.6e-07 57.8 94 31.9
PSO717G0013 Papaver somniferum HOM05D000002 ORTHO05D000001 5.6e-07 57.8 90 35.6
SHI14497 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-07 57.8 92 35.9
SHI29753 Sapria himalayana HOM05D001030 ORTHO05D000001 5.6e-07 57.8 92 35.9
SHI40520 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-07 57.8 92 34.8
PGSC0003DMG400025468 Solanum tuberosum HOM05D000002 ORTHO05D000001 5.6e-07 57.8 92 33.7
vmacro07100 Vaccinium macrocarpon HOM05D001127 ORTHO05D002230 5.6e-07 57.8 60 45.0
MD10G1237700 Malus domestica HOM05D000002 ORTHO05D000047 7.3e-07 57.4 94 35.1
Sopen07g006560 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-07 57.4 92 33.7
Sopen11g020850 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-07 57.4 71 40.8
SHI14921 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-07 57.0 102 33.3
vmacro03330 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 9.5e-07 57.0 90 33.3
vmacro23350 Vaccinium macrocarpon HOM05D000121 ORTHO05D000102 9.5e-07 57.0 51 51.0
CSS0036773 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-06 56.6 97 32.0
Oeu041660.4 Olea europaea HOM05D000002 ORTHO05D000047 1.2e-06 56.6 97 30.9
RcHm_v2.0_Chr2g0156071 Rosa chinensis HOM05D000002 ORTHO05D000001 1.2e-06 56.6 94 30.9
SHI22286 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 56.6 92 35.9
SHI27000 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 56.6 92 35.9
SHI32732 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 56.6 79 39.2
Manes.07G072314 Manihot esculenta HOM05D007305 ORTHO05D009886 1.6e-06 56.2 98 31.6
RcHm_v2.0_Chr4g0388371 Rosa chinensis HOM05D000002 ORTHO05D000047 1.6e-06 56.2 98 26.5
SHI03781 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-06 56.2 97 34.0
SHI27053 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-06 56.2 90 34.4
SHI27632 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-06 56.2 92 34.8
SHI45159 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-06 56.2 73 41.1
SEGI_28989 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.6e-06 56.2 94 28.7
ECA246G4200 Erigeron canadensis HOM05D001707 ORTHO05D000001 2.1e-06 55.8 71 43.7
SHI30488 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-06 55.8 90 36.7
SHI32931 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-06 55.8 73 39.7
SHI12565 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-06 55.5 92 32.6
SHI29618 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-06 55.5 92 33.7
SHI35811 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-06 55.5 84 36.9
MD10G1307000 Malus domestica HOM05D000002 ORTHO05D000001 3.6e-06 55.1 94 31.9
Oeu019485.1 Olea europaea HOM05D023524 ORTHO05D009886 3.6e-06 55.1 71 39.4
SHI03492 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-06 55.1 92 33.7
SHI27215 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-06 55.1 73 43.8
SHI49787 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-06 55.1 88 38.6
SEGI_33603 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.6e-06 55.1 94 29.8
TPR.G33357 Trifolium pratense HOM05D000002 ORTHO05D000047 3.6e-06 55.1 92 30.4
TWI31G1243 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 3.6e-06 55.1 94 29.8
TWI34G1144 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 3.6e-06 55.1 94 29.8
SHI26358 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.7 92 34.8
Lalb_Chr15g0078731 Lupinus albus HOM05D000002 ORTHO05D000047 6.2e-06 54.3 103 31.1
MD14G1033400 Malus domestica HOM05D000002 ORTHO05D000047 6.2e-06 54.3 94 28.7
SHI03307 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-06 54.3 77 39.0
SHI09499 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-06 54.3 78 38.5
SHI20749 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-06 54.3 92 34.8
SEGI_03840 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 6.2e-06 54.3 94 28.7
SEGI_41209 Sequoiadendron giganteum HOM05D001800 ORTHO05D000047 6.2e-06 54.3 94 28.7
PGR031G0692 Punica granatum HOM05D000002 ORTHO05D000047 8.1e-06 53.9 89 32.6
Sabra04G0005000 Salix brachista HOM05D004784 ORTHO05D005762 8.1e-06 53.9 95 31.6
Sabra16G0136100 Salix brachista HOM05D000002 ORTHO05D000047 8.1e-06 53.9 95 31.6
SHI01080 Sapria himalayana HOM05D000002 ORTHO05D000001 8.1e-06 53.9 92 34.8
SHI32533 Sapria himalayana HOM05D000002 ORTHO05D000001 8.1e-06 53.9 73 41.1
SEGI_27629 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 8.1e-06 53.9 94 29.8


User provided reference genes

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