Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.06G075800 Carya illinoinensis HOM05D000564 ORTHO05D028668 9.6e-74 280.0 137 100.0
CiPaw.08G074200 Carya illinoinensis HOM05D000564 ORTHO05D002780 4.7e-12 75.1 37 94.6
CiPaw.07G137500 Carya illinoinensis HOM05D000564 ORTHO05D002780 5.2e-11 71.6 37 89.2
Haze_22802 Corylus avellana HOM05D000564 ORTHO05D002780 6.8e-11 71.2 50 72.0
arahy.Tifrunner.gnm1.ann1.7A0A2P Arachis hypogaea HOM05D000564 ORTHO05D002780 1.2e-10 70.5 37 86.5
arahy.Tifrunner.gnm1.ann1.TAF7VU Arachis hypogaea HOM05D000564 ORTHO05D002780 1.2e-10 70.5 37 86.5
MSTRG.24928 Avicennia marina HOM05D000564 ORTHO05D002780 1.2e-10 70.5 37 86.5
Ca_15428_v3 Cicer arietinum L. HOM05D000564 ORTHO05D002780 1.2e-10 70.5 37 86.5
Lalb_Chr08g0246461 Lupinus albus HOM05D000564 ORTHO05D002780 1.2e-10 70.5 37 86.5
Psat5g010080 Pisum sativum HOM05D000564 ORTHO05D002780 1.2e-10 70.5 38 84.2
PGR083G1740 Punica granatum HOM05D000564 ORTHO05D002780 1.2e-10 70.5 37 86.5
VMungo1309G2497 Vigna mungo HOM05D000564 ORTHO05D002780 1.2e-10 70.5 38 81.6
Gohir.A01G104800 Gossypium hirsutum HOM05D000564 ORTHO05D002780 1.5e-10 70.1 37 86.5
Lalb_Chr23g0265741 Lupinus albus HOM05D000564 ORTHO05D002780 1.5e-10 70.1 37 83.8
Peaxi162Scf00711g00211 Petunia axillaris HOM05D000564 ORTHO05D002780 2.0e-10 69.7 38 84.2
CANSAT25G3484 Cannabis sativa HOM05D000564 ORTHO05D002780 2.6e-10 69.3 37 83.8
Cfa014096 Carpinus fangiana HOM05D000564 ORTHO05D002780 2.6e-10 69.3 37 86.5
Cpa.g.sc26.185 Carica papaya HOM05D000564 ORTHO05D002780 3.4e-10 68.9 37 83.8
Cc10_g00550 Coffea canephora HOM05D000564 ORTHO05D002780 3.4e-10 68.9 37 83.8
Dinv31954 Davidia involucrata HOM05D000564 ORTHO05D002780 3.4e-10 68.9 37 86.5
Glyma.04G017300 Glycine max HOM05D000564 ORTHO05D002780 3.4e-10 68.9 37 83.8
Glyma.06G017700 Glycine max HOM05D000564 ORTHO05D002780 3.4e-10 68.9 37 83.8
Phvul.009G011300 Phaseolus vulgaris HOM05D000564 ORTHO05D002780 3.4e-10 68.9 37 83.8
PGR142G4088 Punica granatum HOM05D000564 ORTHO05D002780 3.4e-10 68.9 37 83.8
THA.LOC104801956 Tarenaya hassleriana HOM05D000564 ORTHO05D002780 3.4e-10 68.9 37 83.8
THA.LOC104813176 Tarenaya hassleriana HOM05D000564 ORTHO05D002780 3.4e-10 68.9 38 81.6
Duzib041G0747 Durio zibethinus HOM05D000564 ORTHO05D002780 4.4e-10 68.6 37 86.5
Gorai.002G115700 Gossypium raimondii HOM05D000564 ORTHO05D002780 4.4e-10 68.6 37 83.8
Lj4C806T13 Lonicera japonica HOM05D000564 ORTHO05D002780 4.4e-10 68.6 37 83.8
MD06G1009400 Malus domestica HOM05D000564 ORTHO05D002780 4.4e-10 68.6 37 81.1
SalBow7G2064 Salvia bowleyana HOM05D000564 ORTHO05D002780 4.4e-10 68.6 59 59.3
Thecc.08G060400 Theobroma cacao HOM05D000564 ORTHO05D002780 4.4e-10 68.6 37 86.5
Lj1g0023322 Lotus japonicus HOM05D000564 ORTHO05D002780 5.7e-10 68.2 37 81.1
Lalb_Chr11g0061571 Lupinus albus HOM05D000564 ORTHO05D002780 5.7e-10 68.2 37 83.8
Nn5g30968 Nelumbo nucifera HOM05D000564 ORTHO05D002780 5.7e-10 68.2 37 83.8
Nn6g31715 Nelumbo nucifera HOM05D000564 ORTHO05D002780 5.7e-10 68.2 37 83.8
TAR628G0472 Trochodendron aralioides HOM05D000564 ORTHO05D002780 5.7e-10 68.2 37 83.8
GSVIVG01013373001 Vitis vinifera HOM05D000564 ORTHO05D002780 5.7e-10 68.2 37 81.1
Ciclev10000039m.g Citrus clementina HOM05D000564 ORTHO05D002780 7.5e-10 67.8 37 81.1
Migut.C00393 Erythranthe guttata HOM05D000564 ORTHO05D002780 7.5e-10 67.8 36 86.1
Medtr3g115450 Medicago truncatula HOM05D000564 ORTHO05D002780 7.5e-10 67.8 37 83.8
Psat7g252600 Pisum sativum HOM05D000564 ORTHO05D028668 7.5e-10 67.8 37 83.8
GSVIVG01023884001 Vitis vinifera HOM05D000564 ORTHO05D002780 7.5e-10 67.8 37 81.1
AL1G51340 Arabidopsis lyrata HOM05D000564 ORTHO05D002780 9.8e-10 67.4 37 81.1
AT1G42470 Arabidopsis thaliana HOM05D000564 ORTHO05D002780 9.8e-10 67.4 37 81.1
BcaB02g10131 Brassica carinata HOM05D000564 ORTHO05D002780 9.8e-10 67.4 37 81.1
BcaB06g28180 Brassica carinata HOM05D000564 ORTHO05D002780 9.8e-10 67.4 37 81.1
Carub.0001s3427 Capsella rubella HOM05D000564 ORTHO05D002780 9.8e-10 67.4 37 81.1
CAN.G311.125 Capsicum annuum HOM05D000564 ORTHO05D002780 9.8e-10 67.4 37 83.8
Lsat_1_v5_gn_2_4580 Lactuca sativa HOM05D000564 ORTHO05D002780 9.8e-10 67.4 37 78.4
Sp4g10810 Schrenkiella parvula HOM05D000564 ORTHO05D002780 9.8e-10 67.4 37 81.1
Sc08g0002290 Simmondsia chinensis HOM05D000564 ORTHO05D002780 9.8e-10 67.4 37 81.1
Actinidia15499 Actinidia chinensis HOM05D000564 ORTHO05D002780 1.3e-09 67.0 37 78.4
Actinidia17048 Actinidia chinensis HOM05D000564 ORTHO05D002780 1.3e-09 67.0 37 78.4
AUR62040814 Chenopodium quinoa HOM05D000564 ORTHO05D002780 1.3e-09 67.0 38 81.6
Duzib093G0382 Durio zibethinus HOM05D000564 ORTHO05D002780 1.3e-09 67.0 37 83.8
Prupe.5G011100 Prunus persica HOM05D000564 ORTHO05D002780 1.3e-09 67.0 37 78.4
QL02p014478 Quercus lobata HOM05D000564 ORTHO05D002780 1.3e-09 67.0 36 86.1
Solyc04g082490.3 Solanum lycopersicum HOM05D000564 ORTHO05D002780 1.3e-09 67.0 37 83.8
Sopen04g036110 Solanum pennellii HOM05D000564 ORTHO05D002780 1.3e-09 67.0 37 83.8
TWI56G0100 Tripterygium wilfordii HOM05D000564 ORTHO05D002780 1.3e-09 67.0 37 81.1
CARHR292420 Cardamine hirsuta HOM05D000564 ORTHO05D002780 1.7e-09 66.6 37 81.1
Eucgr.F01780 Eucalyptus grandis HOM05D000564 ORTHO05D002780 1.7e-09 66.6 37 81.1
Thhalv10016155m.g Eutrema salsugineum HOM05D000564 ORTHO05D002780 1.7e-09 66.6 37 81.1
Nitab4.5_0004470g0030 Nicotiana tabacum HOM05D000564 ORTHO05D002780 1.7e-09 66.6 37 83.8
TAR381G0938 Trochodendron aralioides HOM05D000564 ORTHO05D002780 1.7e-09 66.6 37 81.1
Atru.chr13.127 Acer truncatum HOM05D000564 ORTHO05D002780 2.2e-09 66.2 37 81.1
Aqoxy6G01639 Aquilegia oxysepala HOM05D000564 ORTHO05D002780 2.2e-09 66.2 37 81.1
Cpa.g.sc20.217 Carica papaya HOM05D000564 ORTHO05D010193 2.2e-09 66.2 38 76.3
Dinv41875 Davidia involucrata HOM05D000564 ORTHO05D002780 2.2e-09 66.2 37 81.1
HanXRQChr06g0184121 Helianthus annuus HOM05D000564 ORTHO05D002780 2.2e-09 66.2 37 78.4
Atru.chr5.3545 Acer truncatum HOM05D000564 ORTHO05D002780 2.8e-09 65.9 37 78.4
AT4G38350 Arabidopsis thaliana HOM05D000564 ORTHO05D002780 2.8e-09 65.9 37 78.4
arahy.Tifrunner.gnm1.ann1.LDA3VX Arachis hypogaea HOM05D000564 ORTHO05D002780 2.8e-09 65.9 41 75.6
arahy.Tifrunner.gnm1.ann1.RY1VLM Arachis hypogaea HOM05D000564 ORTHO05D002780 2.8e-09 65.9 41 75.6
BcaC02g10930 Brassica carinata HOM05D000564 ORTHO05D002780 2.8e-09 65.9 37 78.4
A07p18520 Brassica napus HOM05D000564 ORTHO05D002780 2.8e-09 65.9 37 78.4
C04p23550 Brassica napus HOM05D000564 ORTHO05D002780 2.8e-09 65.9 37 78.4
BolC4t23858H Brassica oleracea HOM05D000564 ORTHO05D002780 2.8e-09 65.9 37 78.4
BraA07t29566Z Brassica rapa HOM05D000564 ORTHO05D002780 2.8e-09 65.9 37 78.4
MELO3C017027.2 Cucumis melo HOM05D000564 ORTHO05D002780 2.8e-09 65.9 37 81.1
CsaV3_4G037280 Cucumis sativus L. HOM05D000564 ORTHO05D002780 2.8e-09 65.9 37 81.1
DCAR_013926 Daucus carota HOM05D000564 ORTHO05D002780 2.8e-09 65.9 38 78.9
PSO541G5974 Papaver somniferum HOM05D000564 ORTHO05D002780 2.8e-09 65.9 37 78.4
PSO675G3157 Papaver somniferum HOM05D000564 ORTHO05D002780 2.8e-09 65.9 37 78.4
Potri.005G251800 Populus trichocarpa HOM05D000564 ORTHO05D002780 2.8e-09 65.9 37 78.4
Sabra05G0195100 Salix brachista HOM05D000564 ORTHO05D002780 2.8e-09 65.9 37 78.4
THA.LOC104824737 Tarenaya hassleriana HOM05D000564 ORTHO05D002780 2.8e-09 65.9 37 78.4
A04p21250 Brassica napus HOM05D000564 ORTHO05D002780 3.7e-09 65.5 37 78.4
BolC4t27244H Brassica oleracea HOM05D000564 ORTHO05D002780 3.7e-09 65.5 37 78.4
BraA04t17693Z Brassica rapa HOM05D000564 ORTHO05D002780 3.7e-09 65.5 37 78.4
AUR62012915 Chenopodium quinoa HOM05D000564 ORTHO05D002780 3.7e-09 65.5 39 74.4
ECA238G2170 Erigeron canadensis HOM05D000564 ORTHO05D002780 3.7e-09 65.5 37 75.7
Hma1.2p1_1100F.1_g256940 Hydrangea macrophylla HOM05D000564 ORTHO05D002780 3.7e-09 65.5 37 78.4
Manes.05G130900 Manihot esculenta HOM05D000564 ORTHO05D002780 3.7e-09 65.5 38 76.3
Oeu000697.1 Olea europaea HOM05D000564 ORTHO05D002780 3.7e-09 65.5 37 78.4
QL11p055968 Quercus lobata HOM05D000564 ORTHO05D002780 3.7e-09 65.5 37 78.4
RcHm_v2.0_Chr7g0215501 Rosa chinensis HOM05D000564 ORTHO05D002780 3.7e-09 65.5 37 81.1
TWI31G1441 Tripterygium wilfordii HOM05D000564 ORTHO05D002780 3.7e-09 65.5 37 78.4
FAN04G1562 Fragaria x ananassa HOM05D000564 ORTHO05D002780 4.8e-09 65.1 38 78.9
FAN18G0314 Fragaria x ananassa HOM05D000564 ORTHO05D002780 4.8e-09 65.1 38 78.9
LjContig00081g0019328 Lotus japonicus HOM05D000564 ORTHO05D002780 4.8e-09 65.1 41 75.6
Sed0019066 Sechium edule HOM05D000564 ORTHO05D002780 4.8e-09 65.1 37 78.4
Hund05093 Selenicereus undatus HOM05D000564 ORTHO05D002780 4.8e-09 65.1 38 76.3
TPR.G38096 Trifolium pratense HOM05D000564 ORTHO05D002780 4.8e-09 65.1 37 78.4
BcaC02g08217 Brassica carinata HOM05D000564 ORTHO05D002780 6.3e-09 64.7 37 78.4
A08p24230 Brassica napus HOM05D000564 ORTHO05D002780 6.3e-09 64.7 37 75.7
BraA08t34378Z Brassica rapa HOM05D000564 ORTHO05D002780 6.3e-09 64.7 37 75.7
CSS0002623 Camellia sinensis var. sinensis HOM05D000564 ORTHO05D002780 6.3e-09 64.7 37 78.4
CiPaw.05G092000 Carya illinoinensis HOM05D000564 ORTHO05D002780 6.3e-09 64.7 37 78.4
MELO3C013507.2 Cucumis melo HOM05D000564 ORTHO05D002780 6.3e-09 64.7 42 69.0
CsaV3_6G010220 Cucumis sativus L. HOM05D000564 ORTHO05D002780 6.3e-09 64.7 42 69.0
Ah.00g000930 Amaranthus hybridus HOM05D000564 ORTHO05D002780 8.3e-09 64.3 38 78.9
EL10Ac1g01939 Beta vulgaris HOM05D000564 ORTHO05D002780 8.3e-09 64.3 37 78.4
Cfa005358 Carpinus fangiana HOM05D000564 ORTHO05D002780 8.3e-09 64.3 37 75.7
AUR62011714 Chenopodium quinoa HOM05D000564 ORTHO05D002780 8.3e-09 64.3 37 75.7
Haze_02005 Corylus avellana HOM05D000001 ORTHO05D000003 8.3e-09 64.3 37 75.7
Phvul.008G291900 Phaseolus vulgaris HOM05D000564 ORTHO05D002780 8.3e-09 64.3 41 75.6
Potri.002G009600 Populus trichocarpa HOM05D000564 ORTHO05D002780 8.3e-09 64.3 37 75.7
Sabra02G0007000 Salix brachista HOM05D000564 ORTHO05D002780 8.3e-09 64.3 37 75.7
Sed0023022 Sechium edule HOM05D000564 ORTHO05D002780 8.3e-09 64.3 42 69.0
Sc15g0004390 Simmondsia chinensis HOM05D000564 ORTHO05D002780 8.3e-09 64.3 37 78.4
CANSAT25G2553 Cannabis sativa HOM05D000564 ORTHO05D002780 1.1e-08 63.9 37 75.7
Ca_06501_v3 Cicer arietinum L. HOM05D000564 ORTHO05D002780 1.1e-08 63.9 41 73.2
ClCG11G018740 Citrullus lanatus HOM05D000564 ORTHO05D002780 1.1e-08 63.9 36 80.6
Manes.11G110701 Manihot esculenta HOM05D000564 ORTHO05D002780 1.1e-08 63.9 37 78.4
Ah.01g023750 Amaranthus hybridus HOM05D000564 ORTHO05D002780 1.4e-08 63.5 36 75.0
Carub.0007s0024 Capsella rubella HOM05D000564 ORTHO05D002780 1.4e-08 63.5 37 75.7
FvH4_5g25290 Fragaria vesca HOM05D000564 ORTHO05D002780 1.4e-08 63.5 37 78.4
Oeu026509.1 Olea europaea HOM05D000564 ORTHO05D002780 1.4e-08 63.5 38 73.7
Sp7g37420 Schrenkiella parvula HOM05D000564 ORTHO05D002780 1.4e-08 63.5 37 75.7
GSVIVG01032287001 Vitis vinifera HOM05D000564 ORTHO05D028668 1.4e-08 63.5 43 67.4
ClCG02G009900 Citrullus lanatus HOM05D000564 ORTHO05D002780 1.8e-08 63.2 42 66.7
COL.COLO4_17925 Corchorus olitorius HOM05D000564 ORTHO05D002780 1.8e-08 63.2 41 70.7
Glyma.02G310900 Glycine max HOM05D000564 ORTHO05D002780 1.8e-08 63.2 41 73.2
Glyma.14G001500 Glycine max HOM05D000564 ORTHO05D002780 1.8e-08 63.2 41 73.2
Lalb_Chr04g0246941 Lupinus albus HOM05D000564 ORTHO05D002780 1.8e-08 63.2 41 75.6
SGA_v2.0_scaffold319G48542 Striga asiatica HOM05D000564 ORTHO05D002780 1.8e-08 63.2 37 73.0
SGA_v2.0_scaffold587G53060 Striga asiatica HOM05D000564 ORTHO05D002780 1.8e-08 63.2 37 75.7
Thecc.02G044300 Theobroma cacao HOM05D000564 ORTHO05D002780 1.8e-08 63.2 37 75.7
VMungo0647G1134 Vigna mungo HOM05D000564 ORTHO05D002780 1.8e-08 63.2 41 73.2
Aa31sc108G40 Aethionema arabicum HOM05D000564 ORTHO05D002780 2.4e-08 62.8 37 75.7
BcaC01g00220 Brassica carinata HOM05D000564 ORTHO05D002780 2.4e-08 62.8 37 73.0
C03p77090 Brassica napus HOM05D000564 ORTHO05D002780 2.4e-08 62.8 37 73.0
BolC3t19960H Brassica oleracea HOM05D000564 ORTHO05D002780 2.4e-08 62.8 37 73.0
CSS0007243 Camellia sinensis var. sinensis HOM05D000564 ORTHO05D002780 2.4e-08 62.8 37 73.0
FAN08G0043 Fragaria x ananassa HOM05D000564 ORTHO05D002780 2.4e-08 62.8 38 76.3
AL7G10220 Arabidopsis lyrata HOM05D000564 ORTHO05D002780 3.1e-08 62.4 37 73.0
Eucgr.I01521 Eucalyptus grandis HOM05D000564 ORTHO05D002780 3.1e-08 62.4 37 73.0
HanXRQChr14g0427461 Helianthus annuus HOM05D000564 ORTHO05D002780 3.1e-08 62.4 37 70.3
vmacro02336 Vaccinium macrocarpon HOM05D000564 ORTHO05D002780 3.1e-08 62.4 37 73.0
CARHR294090 Cardamine hirsuta HOM05D000564 ORTHO05D002780 4.1e-08 62.0 37 73.0
Duzib132G1131 Durio zibethinus HOM05D000564 ORTHO05D002780 4.1e-08 62.0 37 75.7
Thhalv10024233m.g Eutrema salsugineum HOM05D000564 ORTHO05D002780 4.1e-08 62.0 37 73.0
Manes.18G004200 Manihot esculenta HOM05D000564 ORTHO05D002780 4.1e-08 62.0 36 75.0
Prupe.8G178600 Prunus persica HOM05D000564 ORTHO05D002780 4.1e-08 62.0 37 73.0
RcHm_v2.0_Chr6g0280781 Rosa chinensis HOM05D000564 ORTHO05D002780 4.1e-08 62.0 37 73.0
FvH4_2g16650 Fragaria vesca HOM05D000564 ORTHO05D002780 5.4e-08 61.6 37 73.0
FAN15G2627 Fragaria x ananassa HOM05D000564 ORTHO05D002780 5.4e-08 61.6 37 73.0
FAN24G2145 Fragaria x ananassa HOM05D000564 ORTHO05D002780 5.4e-08 61.6 37 73.0
MD10G1139800 Malus domestica HOM05D000564 ORTHO05D002780 5.4e-08 61.6 36 75.0
Aa31LG6G16770 Aethionema arabicum HOM05D000564 ORTHO05D002780 7.0e-08 61.2 37 73.0
Gohir.D01G166300 Gossypium hirsutum HOM05D000564 ORTHO05D002780 7.0e-08 61.2 37 73.0
Gorai.002G206800 Gossypium raimondii HOM05D000564 ORTHO05D002780 7.0e-08 61.2 37 73.0
Medtr5g099070 Medicago truncatula HOM05D000564 ORTHO05D002780 9.1e-08 60.8 41 68.3
Potri.009G167000 Populus trichocarpa HOM05D000564 ORTHO05D002780 9.1e-08 60.8 37 70.3
Sabra09G0130100 Salix brachista HOM05D000564 ORTHO05D002780 9.1e-08 60.8 37 70.3
ATR0807G132 Amborella trichopoda HOM05D000564 ORTHO05D002780 1.2e-07 60.5 37 75.7
Rhsim11G0197500 Rhododendron simsii HOM05D000564 ORTHO05D002780 1.2e-07 60.5 37 67.6
TPR.G18634 Trifolium pratense HOM05D000564 ORTHO05D002780 1.6e-07 60.1 41 68.3
HPP92_001734 Vanilla planifolia HOM05D000564 ORTHO05D002780 2.7e-07 59.3 37 73.0
CBR_g70736 Chara braunii HOM05D000564 ORTHO05D002780 4.5e-07 58.5 71 43.7
Psat2g001080 Pisum sativum HOM05D000564 ORTHO05D002780 4.5e-07 58.5 41 63.4
Psat4g065600 Pisum sativum HOM05D002880 ORTHO05D028668 1.0e-06 57.4 34 73.5
Zm00001eb429140 Zea mays HOM05D000564 ORTHO05D002780 1.3e-06 57.0 37 70.3
EL10Ac9g21241 Beta vulgaris HOM05D000564 ORTHO05D002780 1.7e-06 56.6 32 78.1
AagrBONN_evm.TU.Sc2ySwM_369.173 Anthoceros agrestis HOM05D000564 ORTHO05D002780 2.9e-06 55.8 36 69.4
Ciclev10030120m.g Citrus clementina HOM05D000564 ORTHO05D002780 2.9e-06 55.8 34 67.6
SMO172G0174 Selaginella moellendorffii HOM05D000564 ORTHO05D002780 6.6e-06 54.7 36 66.7
Mapoly0038s0034 Marchantia polymorpha HOM05D000564 ORTHO05D002780 8.6e-06 54.3 36 69.4


User provided reference genes

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