Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.04G028300 Carya illinoinensis HOM05D004159 ORTHO05D005858 0.0e+00 1194.1 606 100.0
CiPaw.03G043300 Carya illinoinensis HOM05D004159 ORTHO05D005858 0.0e+00 1112.1 602 92.9
Haze_14736 Corylus avellana HOM05D004159 ORTHO05D005858 5.6e-291 1003.8 602 83.1
QL02p074797 Quercus lobata HOM05D004159 ORTHO05D005858 1.4e-289 999.2 603 82.4
Cfa007372 Carpinus fangiana HOM05D004159 ORTHO05D005858 7.0e-286 986.9 602 81.7
GSVIVG01032412001 Vitis vinifera HOM05D004159 ORTHO05D005858 4.1e-270 934.5 606 78.1
Actinidia09406 Actinidia chinensis HOM05D004159 ORTHO05D005858 5.4e-270 934.1 605 78.0
TAR629G3285 Trochodendron aralioides HOM05D004159 ORTHO05D005858 2.7e-269 931.8 600 77.2
CSS0048893 Camellia sinensis var. sinensis HOM05D004159 ORTHO05D005858 7.8e-269 930.2 599 77.5
Eucgr.I01748 Eucalyptus grandis HOM05D004159 ORTHO05D005858 5.6e-267 924.1 600 77.2
Rhsim10G0017800 Rhododendron simsii HOM05D004159 ORTHO05D005858 2.8e-266 921.8 600 77.0
PGR142G2553 Punica granatum HOM05D004159 ORTHO05D005858 1.4e-265 919.5 605 76.0
TAR371G0318 Trochodendron aralioides HOM05D004159 ORTHO05D005858 1.4e-265 919.5 601 76.4
Hma1.2p1_0078F.1_g040070 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.9e-262 909.1 598 76.1
Cc07_g01750 Coffea canephora HOM05D004159 ORTHO05D005858 6.6e-260 900.6 605 74.9
Nn3g16747 Nelumbo nucifera HOM05D004159 ORTHO05D005858 9.6e-259 896.7 604 74.8
Solyc07g047670.3 Solanum lycopersicum HOM05D004159 ORTHO05D005858 1.8e-257 892.5 603 74.0
CANSAT64G2890 Cannabis sativa HOM05D004159 ORTHO05D005858 4.0e-257 891.3 602 75.4
PGSC0003DMG400006122 Solanum tuberosum HOM05D004159 ORTHO05D005858 1.7e-255 885.9 618 72.7
Peaxi162Scf00700g00427 Petunia axillaris HOM05D004159 ORTHO05D005858 2.4e-254 882.1 599 74.1
TWI56G0312 Tripterygium wilfordii HOM05D004159 ORTHO05D005858 7.1e-254 880.6 601 73.2
Sabra04G0067000 Salix brachista HOM05D004159 ORTHO05D005858 9.3e-254 880.2 599 73.0
Potri.004G121400 Populus trichocarpa HOM05D004159 ORTHO05D005858 1.2e-253 879.8 600 73.5
Cpa.g.sc108.65 Carica papaya HOM05D004159 ORTHO05D005858 6.0e-253 877.5 616 73.1
vmacro05861 Vaccinium macrocarpon HOM05D004159 ORTHO05D005858 1.0e-252 876.7 637 70.8
MBI16_g23841_MAGBIO Magnolia biondii HOM05D004159 ORTHO05D005858 6.6e-252 874.0 604 72.4
Lj7C599T6 Lonicera japonica HOM05D004159 ORTHO05D005858 1.5e-251 872.8 597 73.5
MSTRG.20029 Avicennia marina HOM05D004159 ORTHO05D005858 5.6e-251 870.9 607 72.8
CAN.G1819.1 Capsicum annuum HOM05D004159 ORTHO05D005858 1.5e-248 862.8 607 72.2
Nitab4.5_0006221g0020 Nicotiana tabacum HOM05D004159 ORTHO05D005858 1.4e-246 856.3 635 69.6
Atru.chr6.2388 Acer truncatum HOM05D004159 ORTHO05D005858 1.2e-245 853.2 602 71.4
Nitab4.5_0003930g0060 Nicotiana tabacum HOM05D004159 ORTHO05D005858 2.1e-245 852.4 607 70.7
Prupe.3G291100 Prunus persica HOM05D004159 ORTHO05D005858 2.1e-245 852.4 602 71.9
Sed0001839 Sechium edule HOM05D004159 ORTHO05D005858 1.5e-243 846.3 598 71.4
SGA_v2.0_scaffold32G13248 Striga asiatica HOM05D004159 ORTHO05D005858 1.9e-243 845.9 606 71.8
ClCG01G013750 Citrullus lanatus HOM05D004159 ORTHO05D005858 2.5e-243 845.5 603 70.8
DCAR_021719 Daucus carota HOM05D004159 ORTHO05D005858 1.8e-241 839.3 610 70.7
MD17G1027600 Malus domestica HOM05D004159 ORTHO05D005858 4.0e-241 838.2 603 71.0
Ciclev10014699m.g Citrus clementina HOM05D004159 ORTHO05D005858 2.0e-240 835.9 606 69.6
Dinv33444 Davidia involucrata HOM05D004159 ORTHO05D005858 5.8e-240 834.3 542 78.0
THA.LOC104824006 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 1.1e-238 830.1 605 69.9
AT5G14520 Arabidopsis thaliana HOM05D004159 ORTHO05D005858 1.4e-238 829.7 608 69.2
Manes.17G112500 Manihot esculenta HOM05D004159 ORTHO05D005858 1.9e-238 829.3 598 69.7
Sp6g29490 Schrenkiella parvula HOM05D004159 ORTHO05D005858 3.2e-238 828.6 601 70.7
Thhalv10013046m.g Eutrema salsugineum HOM05D004159 ORTHO05D005858 9.3e-238 827.0 604 69.9
THA.LOC104822401 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 1.6e-237 826.2 598 70.1
Sed0003581 Sechium edule HOM05D004159 ORTHO05D005858 2.1e-237 825.9 603 69.2
BcaB01g05107 Brassica carinata HOM05D004159 ORTHO05D005858 2.7e-237 825.5 601 70.0
LjContig00272g0012452 Lotus japonicus HOM05D004159 ORTHO05D005858 6.0e-237 824.3 604 68.4
CARHR198790 Cardamine hirsuta HOM05D004159 ORTHO05D005858 2.3e-236 822.4 599 70.6
C03p07700 Brassica napus HOM05D004159 ORTHO05D005858 3.0e-236 822.0 602 70.3
Lj1g0017236 Lotus japonicus HOM05D004159 ORTHO05D005858 3.9e-236 821.6 604 68.5
BolC3t13270H Brassica oleracea HOM05D004159 ORTHO05D005858 6.7e-236 820.8 602 69.9
MD09G1027600 Malus domestica HOM05D004159 ORTHO05D005858 1.1e-235 820.1 584 71.7
A03p06670 Brassica napus HOM05D004159 ORTHO05D005858 1.5e-235 819.7 603 69.7
AL6G25270 Arabidopsis lyrata HOM05D004159 ORTHO05D005858 1.9e-235 819.3 573 71.9
BraA03t10001Z Brassica rapa HOM05D004159 ORTHO05D005858 5.7e-235 817.8 603 69.5
CDE07G0971 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 5.7e-235 817.8 601 67.7
Migut.B00156 Erythranthe guttata HOM05D004159 ORTHO05D005858 9.6e-235 817.0 605 68.9
Glyma.03G234900 Glycine max HOM05D004159 ORTHO05D005858 2.1e-234 815.8 609 67.8
Migut.N01406 Erythranthe guttata HOM05D004159 ORTHO05D005858 2.8e-234 815.5 602 69.1
SalBow6G0855 Salvia bowleyana HOM05D004159 ORTHO05D005858 6.2e-234 814.3 602 69.8
Duzib187G0134 Durio zibethinus HOM05D004159 ORTHO05D005858 1.1e-233 813.5 602 69.1
Aqoxy5G03802 Aquilegia oxysepala HOM05D004159 ORTHO05D005858 1.4e-233 813.1 604 68.2
Phvul.007G070900 Phaseolus vulgaris HOM05D004159 ORTHO05D005858 2.4e-233 812.4 609 67.8
COL.COLO4_29105 Corchorus olitorius HOM05D004159 ORTHO05D005858 3.1e-233 812.0 597 69.8
Oeu048622.3 Olea europaea HOM05D004159 ORTHO05D005858 5.3e-233 811.2 583 70.0
VMungo0720G1997 Vigna mungo HOM05D004159 ORTHO05D005858 6.9e-233 810.8 604 67.9
Thecc.04G016700 Theobroma cacao HOM05D004159 ORTHO05D005858 9.0e-233 810.4 602 68.6
ATR1132G032 Amborella trichopoda HOM05D004159 ORTHO05D005858 2.6e-232 808.9 598 67.4
Gorai.001G264700 Gossypium raimondii HOM05D004159 ORTHO05D005858 2.6e-232 808.9 602 67.6
CsaV3_1G014060 Cucumis sativus L. HOM05D004159 ORTHO05D005858 7.6e-232 807.4 606 68.8
Gohir.D07G229600 Gossypium hirsutum HOM05D004159 ORTHO05D005858 7.6e-232 807.4 602 67.6
HanXRQChr04g0114031 Helianthus annuus HOM05D004159 ORTHO05D005858 7.6e-232 807.4 605 67.3
Duzib264G0191 Durio zibethinus HOM05D004159 ORTHO05D005858 1.3e-231 806.6 602 68.1
arahy.Tifrunner.gnm1.ann1.M4LD34 Arachis hypogaea HOM05D004159 ORTHO05D005858 1.7e-231 806.2 608 67.6
Lsat_1_v5_gn_2_51000 Lactuca sativa HOM05D004159 ORTHO05D005858 3.8e-231 805.1 615 66.2
Gohir.A07G222900 Gossypium hirsutum HOM05D004159 ORTHO05D005858 1.1e-230 803.5 602 67.3
Glyma.19G232500 Glycine max HOM05D004159 ORTHO05D005858 2.1e-229 799.3 608 65.8
Zm00001eb053960 Zea mays HOM05D004159 ORTHO05D005858 4.6e-229 798.1 618 65.4
MELO3C004873.2 Cucumis melo HOM05D004159 ORTHO05D005858 1.0e-228 797.0 606 67.3
Carub.0006s1270 Capsella rubella HOM05D004159 ORTHO05D005858 3.3e-227 792.0 561 70.8
Lalb_Chr06g0175751 Lupinus albus HOM05D004159 ORTHO05D005858 5.7e-227 791.2 608 66.4
Aa31LG11G15290 Aethionema arabicum HOM05D004159 ORTHO05D005858 3.7e-226 788.5 607 66.7
Medtr7g100040 Medicago truncatula HOM05D004159 ORTHO05D005858 3.7e-226 788.5 611 65.1
Os03g0699200 Oryza sativa ssp. japonica HOM05D004159 ORTHO05D005858 4.8e-226 788.1 603 65.7
HanXRQChr14g0462651 Helianthus annuus HOM05D004159 ORTHO05D005858 6.3e-226 787.7 602 66.3
PSO017G2175 Papaver somniferum HOM05D004159 ORTHO05D005858 7.7e-224 780.8 599 65.6
Psat0s1782g0040 Pisum sativum HOM05D004159 ORTHO05D005858 2.2e-223 779.2 612 65.5
Lalb_Chr02g0160481 Lupinus albus HOM05D004159 ORTHO05D005858 3.8e-223 778.5 610 64.8
RcHm_v2.0_Chr5g0047391 Rosa chinensis HOM05D004159 ORTHO05D005858 3.8e-223 778.5 602 66.8
ECA240G1354 Erigeron canadensis HOM05D004159 ORTHO05D005858 6.5e-223 777.7 602 65.0
Prupe.8G015200 Prunus persica HOM05D004159 ORTHO05D005858 5.5e-222 774.6 598 66.4
Prupe.8G015700 Prunus persica HOM05D004159 ORTHO05D005858 2.1e-221 772.7 598 66.2
EL10Ac8g19455 Beta vulgaris HOM05D004159 ORTHO05D005858 1.5e-219 766.5 602 64.8
FAN25G3844 Fragaria x ananassa HOM05D004159 ORTHO05D005858 1.2e-216 756.9 602 64.6
FvH4_3g26080 Fragaria vesca HOM05D004159 ORTHO05D005858 1.7e-215 753.1 602 64.3
FAN11G1291 Fragaria x ananassa HOM05D004159 ORTHO05D005858 1.7e-215 753.1 602 64.3
Hund22314 Selenicereus undatus HOM05D004159 ORTHO05D005858 1.1e-214 750.4 599 63.8
FAN16G1867 Fragaria x ananassa HOM05D004159 ORTHO05D005858 1.4e-214 750.0 602 64.3
Ca_26485_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 4.2e-214 748.4 603 64.8
Ah.09g231680 Amaranthus hybridus HOM05D004159 ORTHO05D005858 9.4e-214 747.3 610 63.1
Sopen07g024120 Solanum pennellii HOM05D004159 ORTHO05D005858 9.4e-214 747.3 521 72.4
AUR62040778 Chenopodium quinoa HOM05D004159 ORTHO05D005858 2.7e-213 745.7 602 63.3
PSO764G0137 Papaver somniferum HOM05D004159 ORTHO05D005858 6.1e-213 744.6 599 62.9
CDE06G0546 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 1.0e-212 743.8 617 62.9
FAN21G3616 Fragaria x ananassa HOM05D004159 ORTHO05D005858 1.8e-212 743.0 602 63.6
TPR.G1071 Trifolium pratense HOM05D004159 ORTHO05D005858 1.8e-212 743.0 611 62.4
unitig_21.g20810 Utricularia gibba HOM05D004159 ORTHO05D005858 1.2e-208 730.3 608 62.7
AUR62040779 Chenopodium quinoa HOM05D004159 ORTHO05D005858 7.7e-208 727.6 538 66.7
Lsat_1_v5_gn_4_179560 Lactuca sativa HOM05D004159 ORTHO05D005858 1.1e-201 707.2 586 62.1
HPP92_005716 Vanilla planifolia HOM05D004159 ORTHO05D005858 1.1e-201 707.2 602 62.6
ClCG11G000220 Citrullus lanatus HOM05D004159 ORTHO05D005858 1.2e-200 703.7 596 61.9
Prupe.4G071200 Prunus persica HOM05D004159 ORTHO05D005858 3.5e-200 702.2 599 61.4
PSO478G0945 Papaver somniferum HOM05D004159 ORTHO05D005858 1.5e-198 696.8 598 60.4
AUR62029204 Chenopodium quinoa HOM05D004159 ORTHO05D005858 1.7e-194 683.3 602 58.8
SEGI_02382 Sequoiadendron giganteum HOM05D004159 ORTHO05D005858 1.2e-189 667.2 601 58.2
Medtr8g010330 Medicago truncatula HOM05D004159 ORTHO05D005858 1.4e-188 663.7 600 58.2
ECA248G2726 Erigeron canadensis HOM05D004159 ORTHO05D005858 3.5e-176 622.5 602 56.5
SMO356G0182 Selaginella moellendorffii HOM05D004159 ORTHO05D005858 8.9e-172 607.8 601 54.4
AagrBONN_evm.TU.Sc2ySwM_362.1908 Anthoceros agrestis HOM05D004159 ORTHO05D005858 2.6e-171 606.3 631 52.6
Mapoly0138s0023 Marchantia polymorpha HOM05D004159 ORTHO05D005858 4.9e-170 602.1 607 52.1
arahy.Tifrunner.gnm1.ann1.M9AKWN Arachis hypogaea HOM05D004159 ORTHO05D005858 1.2e-168 597.4 471 65.4
Pp3c3_23250 Physcomitrium patens HOM05D004159 ORTHO05D005858 5.1e-159 565.5 601 50.9
Nitab4.5_0008375g0010 Nicotiana tabacum HOM05D004159 ORTHO05D005858 7.3e-158 561.6 444 64.2
Dinv35104 Davidia involucrata HOM05D004159 ORTHO05D005858 1.2e-147 527.7 395 70.1
CBR_g38896 Chara braunii HOM05D004159 ORTHO05D005858 1.2e-139 501.1 736 42.1
Hma1.2p1_2964F.1_g330970 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.5e-131 474.2 319 74.6
TPR.G27000 Trifolium pratense HOM05D004159 ORTHO05D005858 7.6e-131 471.9 512 50.8
Ca_22754_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 1.1e-121 441.4 359 63.5
MCO04G526 Micromonas commoda HOM05D004159 ORTHO05D005858 9.3e-121 438.3 453 49.9
Sc03g0007500 Simmondsia chinensis HOM05D004159 ORTHO05D005858 3.5e-120 436.4 319 67.1
Cre16.g683793 Chlamydomonas reinhardtii HOM05D004159 ORTHO05D005858 6.7e-119 432.2 742 37.6
PRCOL_00002170 Prasinoderma coloniale HOM05D004159 ORTHO05D005858 1.6e-112 411.0 611 42.2
Hma1.2p1_0999F.1_g246250 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 2.7e-112 410.2 356 61.5
Zm00001eb053940 Zea mays HOM05D004159 ORTHO05D005858 5.2e-87 326.2 268 63.8
Haze_26879 Corylus avellana HOM05D004159 ORTHO05D005858 8.5e-82 308.9 592 35.6
Psat1g081880 Pisum sativum HOM05D004159 ORTHO05D019349 9.1e-76 288.9 198 73.2
BcaB01g05108 Brassica carinata HOM05D004159 ORTHO05D005858 3.8e-74 283.5 225 65.3
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 1.5e-70 271.6 487 36.8
RcHm_v2.0_Chr5g0047861 Rosa chinensis HOM05D004159 ORTHO05D036595 5.7e-70 269.6 184 73.4
Sc03g0007510 Simmondsia chinensis HOM05D004159 ORTHO05D005858 4.4e-62 243.4 162 71.6
Hma1.2p1_0999F.1_g246240 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.2e-59 235.3 141 75.2
PSO675G5574 Papaver somniferum HOM05D004159 ORTHO05D302046 1.7e-50 204.9 387 39.5
Gohir.D06G181800 Gossypium hirsutum HOM05D004159 ORTHO05D021100 3.0e-42 177.6 118 71.2
MD10G1043900 Malus domestica HOM05D004159 ORTHO05D036595 2.3e-39 167.9 126 69.0
Gorai.013G041700 Gossypium raimondii HOM05D004159 ORTHO05D005858 8.4e-37 159.5 115 67.0
Gohir.D13G037150 Gossypium hirsutum HOM05D004159 ORTHO05D021100 1.1e-36 159.1 115 66.1
Hma1.2p1_0078F.1_g040075 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 8.6e-34 149.4 101 73.3
Hma1.2p1_0078F.1_g040060 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.5e-33 148.7 101 73.3
Ca_31061_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 2.5e-33 147.9 190 47.9
Aa31sc84G60 Aethionema arabicum HOM05D004159 ORTHO05D007259 2.4e-31 141.4 219 44.3
Actinidia33332 Actinidia chinensis HOM05D004159 ORTHO05D002141 2.0e-30 138.3 80 81.2
HanXRQChr05g0138871 Helianthus annuus HOM05D004159 ORTHO05D005858 4.4e-30 137.1 132 56.8
SEGI_01298 Sequoiadendron giganteum HOM05D004159 ORTHO05D021100 3.2e-28 131.0 76 76.3
RcHm_v2.0_Chr5g0047691 Rosa chinensis HOM05D004159 ORTHO05D036595 1.5e-25 122.1 82 72.0
Medtr6g022610 Medicago truncatula HOM05D004159 ORTHO05D005858 8.1e-24 116.3 182 41.8
Nitab4.5_0008375g0030 Nicotiana tabacum HOM05D004159 ORTHO05D285123 1.4e-23 115.5 137 51.1
Actinidia35769 Actinidia chinensis HOM05D004159 ORTHO05D021100 2.4e-20 104.8 111 55.9
MD13G1107200 Malus domestica HOM05D004159 ORTHO05D021100 1.5e-17 95.5 60 71.7
Lj2g0001382 Lotus japonicus HOM05D004159 ORTHO05D235994 9.9e-14 82.8 57 64.9
Medtr6g022550 Medicago truncatula HOM05D004159 ORTHO05D005858 2.9e-13 81.3 60 65.0
Medtr6g022570 Medicago truncatula HOM05D004159 ORTHO05D005858 2.5e-09 68.2 147 32.7
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 1.3e-08 65.9 34 88.2
Gohir.D10G229800 Gossypium hirsutum HOM05D000561 ORTHO05D000514 5.3e-07 60.5 34 82.4
Zm00001eb053920 Zea mays HOM05D004159 ORTHO05D021100 5.3e-07 60.5 41 68.3
TAR636G1761 Trochodendron aralioides HOM05D004159 ORTHO05D415208 1.5e-06 58.9 82 45.1


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