Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.02G029200 Carya illinoinensis HOM05D005745 ORTHO05D006857 1.8e-212 742.3 356 100.0
CiPaw.02G029400 Carya illinoinensis HOM05D005745 ORTHO05D006857 4.5e-184 647.9 355 90.4
CiPaw.02G029100 Carya illinoinensis HOM05D005745 ORTHO05D006857 9.8e-179 630.2 353 88.7
QL08p049437 Quercus lobata HOM05D005745 ORTHO05D006857 9.3e-145 517.3 354 74.6
Cfa003949 Carpinus fangiana HOM05D000683 ORTHO05D000507 7.3e-142 507.7 358 72.1
Haze_15472 Corylus avellana HOM05D005745 ORTHO05D006857 8.4e-138 494.2 388 66.5
MD01G1055100 Malus domestica HOM05D005745 ORTHO05D006857 4.5e-123 445.3 355 67.0
CANSAT56G0536 Cannabis sativa HOM05D005745 ORTHO05D006857 2.8e-117 426.0 356 63.5
GSVIVG01026870001 Vitis vinifera HOM05D005745 ORTHO05D006857 1.1e-116 424.1 372 60.2
TAR367G0002 Trochodendron aralioides HOM05D005745 ORTHO05D006857 6.5e-114 414.8 352 61.9
Manes.01G259400 Manihot esculenta HOM05D005745 ORTHO05D006857 1.4e-113 413.7 357 61.3
Hma1.2p1_0001F.1_g001520 Hydrangea macrophylla HOM05D005745 ORTHO05D006857 2.7e-112 409.5 353 60.1
Lj7C516G5 Lonicera japonica HOM05D005745 ORTHO05D006857 2.7e-112 409.5 349 61.9
Oeu056358.1 Olea europaea HOM05D005745 ORTHO05D006857 1.0e-111 407.5 352 61.6
TWI23G0914 Tripterygium wilfordii HOM05D005745 ORTHO05D006857 1.8e-111 406.8 356 60.7
Dinv43791 Davidia involucrata HOM05D005745 ORTHO05D006857 3.0e-111 406.0 351 60.1
Actinidia20926 Actinidia chinensis HOM05D005745 ORTHO05D006857 3.9e-111 405.6 358 59.5
Nn6g33496 Nelumbo nucifera HOM05D005745 ORTHO05D006857 8.8e-111 404.4 358 60.9
FAN10G4182 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.5e-110 403.7 354 61.3
CSS0038489 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 4.3e-110 402.1 353 60.1
CSS0024424 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 5.7e-110 401.7 353 59.8
Potri.014G081400 Populus trichocarpa HOM05D005745 ORTHO05D006857 7.4e-110 401.4 352 61.6
Ciclev10020429m.g Citrus clementina HOM05D005745 ORTHO05D006857 1.3e-109 400.6 353 60.6
Rhsim07G0017300 Rhododendron simsii HOM05D000683 ORTHO05D000507 2.8e-109 399.4 354 59.6
Sabra14G0059300 Salix brachista HOM05D005745 ORTHO05D006857 2.8e-109 399.4 359 61.0
Duzib138G1514 Durio zibethinus HOM05D005745 ORTHO05D006857 4.8e-109 398.7 355 60.0
FAN06G1549 Fragaria x ananassa HOM05D005745 ORTHO05D006857 4.8e-109 398.7 354 59.6
Actinidia10034 Actinidia chinensis HOM05D005745 ORTHO05D006857 1.1e-108 397.5 358 58.4
Sc26g0000960 Simmondsia chinensis HOM05D005745 ORTHO05D006857 3.4e-107 392.5 353 60.6
VMungo0331G1900 Vigna mungo HOM05D005745 ORTHO05D006857 5.9e-107 391.7 355 59.2
Lj3g0021692 Lotus japonicus HOM05D005745 ORTHO05D006857 7.7e-107 391.3 356 60.4
Cpa.g.sc18.234 Carica papaya HOM05D005745 ORTHO05D006857 2.9e-106 389.4 354 61.0
DCAR_015932 Daucus carota HOM05D005745 ORTHO05D006857 4.2e-105 385.6 354 59.0
Medtr8g031440 Medicago truncatula HOM05D005745 ORTHO05D006857 7.2e-105 384.8 356 58.4
AUR62033312 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.6e-104 383.6 360 58.1
Aqoxy7G00357 Aquilegia oxysepala HOM05D005745 ORTHO05D006857 3.6e-104 382.5 354 55.9
arahy.Tifrunner.gnm1.ann1.5YG8M2 Arachis hypogaea HOM05D005745 ORTHO05D006857 4.7e-104 382.1 356 59.3
arahy.Tifrunner.gnm1.ann1.JLYP5G Arachis hypogaea HOM05D005745 ORTHO05D006857 4.7e-104 382.1 355 59.4
Sopen05g028140 Solanum pennellii HOM05D005745 ORTHO05D006857 4.7e-104 382.1 359 56.3
AUR62033347 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.4e-103 380.6 360 57.8
Solyc05g048810.4 Solanum lycopersicum HOM05D005745 ORTHO05D006857 1.8e-103 380.2 356 56.5
MSTRG.17255 Avicennia marina HOM05D005745 ORTHO05D006857 3.9e-103 379.0 352 56.2
EL10Ac1g00543 Beta vulgaris HOM05D005745 ORTHO05D006857 3.9e-103 379.0 362 57.2
Lalb_Chr04g0256771 Lupinus albus HOM05D005745 ORTHO05D006857 5.1e-103 378.6 356 58.1
HanXRQChr04g0121611 Helianthus annuus HOM05D005745 ORTHO05D006857 9.7e-102 374.4 349 58.7
vmacro13297 Vaccinium macrocarpon HOM05D005745 ORTHO05D006857 1.3e-101 374.0 357 58.3
Thhalv10007725m.g Eutrema salsugineum HOM05D005745 ORTHO05D006857 4.8e-101 372.1 356 56.5
PGSC0003DMG400021653 Solanum tuberosum HOM05D005745 ORTHO05D006857 1.1e-100 370.9 351 55.8
Hund27291 Selenicereus undatus HOM05D005745 ORTHO05D006857 1.4e-100 370.5 371 56.1
SGA_v2.0_scaffold277G46666 Striga asiatica HOM05D005745 ORTHO05D006857 1.8e-100 370.2 353 55.5
PSO782G5186 Papaver somniferum HOM05D005745 ORTHO05D006857 2.4e-100 369.8 366 54.4
Gohir.D12G109300 Gossypium hirsutum HOM05D005745 ORTHO05D006857 3.1e-100 369.4 356 56.7
Prupe.2G164800 Prunus persica HOM05D005745 ORTHO05D006857 3.1e-100 369.4 325 61.5
Lsat_1_v5_gn_7_5060 Lactuca sativa HOM05D005745 ORTHO05D006857 9.1e-100 367.9 351 57.8
Gorai.008G118400 Gossypium raimondii HOM05D005745 ORTHO05D006857 1.2e-99 367.5 356 56.2
Gohir.A12G105400 Gossypium hirsutum HOM05D005745 ORTHO05D006857 2.0e-99 366.7 356 56.5
ClCG06G003860 Citrullus lanatus HOM05D005745 ORTHO05D006857 3.5e-99 365.9 354 56.5
CsaV3_6G000430 Cucumis sativus L. HOM05D005745 ORTHO05D006857 5.9e-99 365.2 354 56.5
BcaB03g13612 Brassica carinata HOM05D005745 ORTHO05D006857 7.7e-99 364.8 353 56.9
Lalb_Chr10g0097191 Lupinus albus HOM05D005745 ORTHO05D006857 1.0e-98 364.4 354 56.5
ECA236G3051 Erigeron canadensis HOM05D005745 ORTHO05D006857 2.9e-98 362.8 351 56.4
Sed0009525 Sechium edule HOM05D005745 ORTHO05D006857 2.9e-98 362.8 351 57.0
CAN.G1535.1 Capsicum annuum HOM05D005745 ORTHO05D006857 3.8e-98 362.5 352 54.3
THA.LOC104817020 Tarenaya hassleriana HOM05D005745 ORTHO05D006857 3.8e-98 362.5 357 54.9
PSO478G4474 Papaver somniferum HOM05D005745 ORTHO05D006857 8.5e-98 361.3 366 53.3
AT1G01760 Arabidopsis thaliana HOM05D005745 ORTHO05D006857 1.5e-97 360.5 357 54.1
Cc02_g37770 Coffea canephora HOM05D005745 ORTHO05D006857 2.5e-97 359.8 353 55.8
CARHR000560 Cardamine hirsuta HOM05D005745 ORTHO05D006857 4.2e-97 359.0 356 53.4
Peaxi162Scf00191g01322 Petunia axillaris HOM05D005745 ORTHO05D006857 9.4e-97 357.8 355 54.4
A10p00280 Brassica napus HOM05D005745 ORTHO05D006857 2.1e-96 356.7 352 55.1
PGR042G0923 Punica granatum HOM05D005745 ORTHO05D006857 3.6e-96 355.9 369 55.8
Nitab4.5_0007346g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 4.7e-96 355.5 370 53.5
Ah.05g176680 Amaranthus hybridus HOM05D005745 ORTHO05D006857 3.0e-95 352.8 354 55.1
AL1G10580 Arabidopsis lyrata HOM05D005745 ORTHO05D006857 6.7e-95 351.7 357 52.9
Carub.0001s0045 Capsella rubella HOM05D005745 ORTHO05D006857 3.3e-94 349.4 357 53.8
Eucgr.E00173 Eucalyptus grandis HOM05D005745 ORTHO05D006857 4.4e-94 349.0 358 54.2
BolC5t28819H Brassica oleracea HOM05D005745 ORTHO05D006857 1.3e-93 347.4 361 53.5
Sp1g00540 Schrenkiella parvula HOM05D005745 ORTHO05D006857 1.7e-93 347.1 357 54.3
Eucgr.E00169 Eucalyptus grandis HOM05D005745 ORTHO05D006857 2.2e-93 346.7 358 53.9
AUR62004330 Chenopodium quinoa HOM05D005745 ORTHO05D006857 3.1e-92 342.8 366 53.6
BraA10t42305Z Brassica rapa HOM05D005745 ORTHO05D006857 5.3e-92 342.0 373 52.3
C05p00290 Brassica napus HOM05D005745 ORTHO05D006857 1.2e-91 340.9 379 51.5
Aa31LG1G11130 Aethionema arabicum HOM05D005745 ORTHO05D006857 2.7e-91 339.7 394 49.7
Ca_23656_v3 Cicer arietinum L. HOM05D005745 ORTHO05D006857 6.1e-88 328.6 312 57.7
RcHm_v2.0_Chr1g0354081 Rosa chinensis HOM05D005745 ORTHO05D006857 1.0e-87 327.8 377 49.3
Glyma.07G073300 Glycine max HOM05D005745 ORTHO05D006857 2.2e-85 320.1 312 57.7
FAN03G1898 Fragaria x ananassa HOM05D005745 ORTHO05D006857 2.8e-85 319.7 311 56.9
MBI17_g21972_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 4.2e-81 305.8 341 51.0
HPP92_001499 Vanilla planifolia HOM05D005745 ORTHO05D006857 1.6e-80 303.9 354 50.3
Nitab4.5_0002262g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 2.9e-74 283.1 351 48.4
FAN06G0933 Fragaria x ananassa HOM05D005745 ORTHO05D006857 3.0e-71 273.1 282 53.5
MBI18_g01486_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 1.5e-70 270.8 326 48.5
FvH4_7g13861 Fragaria vesca HOM05D005745 ORTHO05D006857 2.0e-70 270.4 275 54.9
Gohir.A12G105450 Gossypium hirsutum HOM05D005745 ORTHO05D006857 4.4e-70 269.2 298 51.3
Atru.BG.56.p Acer truncatum HOM05D005745 ORTHO05D006857 9.8e-70 268.1 343 47.5
MELO3C021221.2 Cucumis melo HOM05D005745 ORTHO05D006857 1.7e-69 267.3 363 46.6
Mapoly0023s0060 Marchantia polymorpha HOM05D005745 ORTHO05D006857 6.4e-69 265.4 453 38.9
Zm00001eb067600 Zea mays HOM05D005745 ORTHO05D006857 7.0e-68 261.9 354 43.5
CDE06G1611 Ceratophyllum demersum HOM05D005745 ORTHO05D006857 6.8e-63 245.4 349 43.3
Pp3c4_14060 Physcomitrium patens HOM05D005745 ORTHO05D006857 1.7e-61 240.7 456 36.4
AagrBONN_evm.TU.Sc2ySwM_362.160 Anthoceros agrestis HOM05D005745 ORTHO05D006857 7.8e-59 231.9 448 36.4
Phvul.010G096200 Phaseolus vulgaris HOM05D005745 ORTHO05D006857 3.0e-58 229.9 216 58.8
Thecc.01G362500 Theobroma cacao HOM05D005745 ORTHO05D006857 1.9e-57 227.3 232 55.2
MD07G1140200 Malus domestica HOM05D005745 ORTHO05D006857 2.1e-56 223.8 290 49.7
Os04g0683500 Oryza sativa ssp. japonica HOM05D005745 ORTHO05D006857 4.4e-54 216.1 319 42.6
TPR.G39633 Trifolium pratense HOM05D005745 ORTHO05D006857 7.5e-54 215.3 162 68.5
Psat4g154320 Pisum sativum HOM05D005745 ORTHO05D006857 1.4e-52 211.1 216 56.0
Prupe.2G165000 Prunus persica HOM05D005745 ORTHO05D006857 1.6e-51 207.6 281 46.6
Oeu056357.1 Olea europaea HOM05D005745 ORTHO05D006857 1.9e-49 200.7 189 57.1
TPR.G4413 Trifolium pratense HOM05D005745 ORTHO05D006857 5.6e-49 199.1 160 64.4
AUR62003100 Chenopodium quinoa HOM05D005745 ORTHO05D006857 4.7e-48 196.1 154 63.6
unitig_26.g9734 Utricularia gibba HOM05D005745 ORTHO05D006857 2.6e-46 190.3 351 39.0
AUR62034353 Chenopodium quinoa HOM05D005745 ORTHO05D006857 5.8e-46 189.1 157 61.8
SHI13462 Sapria himalayana HOM05D005745 ORTHO05D006857 1.5e-41 174.5 300 39.7
ATR0594G105 Amborella trichopoda HOM05D005745 ORTHO05D006857 4.3e-41 172.9 197 50.3
Zm00001eb420790 Zea mays HOM05D005745 ORTHO05D006857 1.2e-40 171.4 158 55.7
Glyma.03G013600 Glycine max HOM05D005745 ORTHO05D006857 4.0e-39 166.4 216 47.7
Zm00001eb191880 Zea mays HOM05D009386 ORTHO05D006857 3.2e-36 156.8 176 49.4
SMO266G0032 Selaginella moellendorffii HOM05D005745 ORTHO05D006857 2.1e-35 154.1 226 43.4
Prupe.2G164500 Prunus persica HOM05D005745 ORTHO05D006857 1.6e-32 144.4 199 46.7
MCO02G004 Micromonas commoda HOM05D005745 ORTHO05D006857 6.2e-32 142.5 411 30.4
EL10Ac7g17708 Beta vulgaris HOM05D005745 ORTHO05D006857 4.9e-29 132.9 87 73.6
FAN01G0854 Fragaria x ananassa HOM05D005745 ORTHO05D006857 8.4e-29 132.1 153 50.3
Glyma.03G013550 Glycine max HOM05D005745 ORTHO05D006857 9.3e-28 128.6 84 71.4
SEGI_32011 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 9.3e-28 128.6 136 51.5
SEGI_32349 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 1.2e-27 128.3 83 71.1
Oeu056356.1 Olea europaea HOM05D005745 ORTHO05D006857 7.9e-27 125.6 81 77.8
AUR62034238 Chenopodium quinoa HOM05D002177 ORTHO05D002257 1.3e-26 124.8 138 51.4
AUR62019766 Chenopodium quinoa HOM05D005745 ORTHO05D006857 3.0e-26 123.6 108 57.4
Atru.chr5.475 Acer truncatum HOM05D005745 ORTHO05D006857 4.3e-25 119.8 91 65.9
PRCOL_00000230 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 2.4e-23 114.0 404 28.2
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 3.8e-21 106.7 99 60.6
Zm00001eb442120 Zea mays HOM05D009386 ORTHO05D006857 4.3e-17 93.2 66 66.7
Cre14.g629283 Chlamydomonas reinhardtii HOM05D005745 ORTHO05D006857 7.4e-17 92.4 106 50.9
COL.COLO4_12683 Corchorus olitorius HOM05D000683 ORTHO05D000507 4.8e-16 89.7 131 42.7
MCO15G493 Micromonas commoda HOM05D005745 ORTHO05D006857 3.8e-13 80.1 326 27.9
MCO14G396 Micromonas commoda HOM05D005745 ORTHO05D006857 1.4e-12 78.2 266 28.2
PRCOL_00001873 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 6.7e-10 69.3 306 27.1


User provided reference genes

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