Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026328 Carpinus fangiana HOM05D003132 ORTHO05D124228 0.0e+00 1313.1 700 100.0
Cre12.g547450 Chlamydomonas reinhardtii HOM05D003132 ORTHO05D003736 1.0e-09 69.7 182 33.0
Sed0019762 Sechium edule HOM05D003132 ORTHO05D003736 6.5e-09 67.0 254 26.8
ClCG06G009880 Citrullus lanatus HOM05D003132 ORTHO05D003736 8.5e-09 66.6 204 29.4
MELO3C008519.2 Cucumis melo HOM05D003132 ORTHO05D003736 1.1e-08 66.2 204 29.4
Lalb_Chr11g0065661 Lupinus albus HOM05D003132 ORTHO05D003736 1.5e-08 65.9 140 35.0
Cfa026479 Carpinus fangiana HOM05D003132 ORTHO05D003736 1.9e-08 65.5 160 28.8
CsaV3_2G011340 Cucumis sativus L. HOM05D003132 ORTHO05D003736 2.5e-08 65.1 204 28.9
CARHR204070 Cardamine hirsuta HOM05D003132 ORTHO05D003736 4.2e-08 64.3 187 29.4
ECA246G0273 Erigeron canadensis HOM05D003132 ORTHO05D003736 5.5e-08 63.9 118 34.7
Lj1g0008302 Lotus japonicus HOM05D003132 ORTHO05D003736 5.5e-08 63.9 331 25.7
Medtr3g073360 Medicago truncatula HOM05D003132 ORTHO05D003736 5.5e-08 63.9 228 28.5
Sopen01g040690 Solanum pennellii HOM05D003132 ORTHO05D003736 7.2e-08 63.5 113 35.4
THA.LOC104806806 Tarenaya hassleriana HOM05D003132 ORTHO05D003736 7.2e-08 63.5 113 38.1
BcaB08g37217 Brassica carinata HOM05D003132 ORTHO05D003736 9.4e-08 63.2 224 29.0
BolC9t59562H Brassica oleracea HOM05D003132 ORTHO05D003736 9.4e-08 63.2 114 36.0
Solyc01g096990.4 Solanum lycopersicum HOM05D003132 ORTHO05D003736 9.4e-08 63.2 113 35.4
Ca_25763_v3 Cicer arietinum L. HOM05D003132 ORTHO05D003736 1.2e-07 62.8 202 28.2
Sp6g33990 Schrenkiella parvula HOM05D003132 ORTHO05D003736 1.2e-07 62.8 190 31.1
C09p68030 Brassica napus HOM05D003132 ORTHO05D003736 1.6e-07 62.4 192 30.2
AUR62023605 Chenopodium quinoa HOM05D003132 ORTHO05D003736 1.6e-07 62.4 165 30.9
PGSC0003DMG400027521 Solanum tuberosum HOM05D003132 ORTHO05D003736 1.6e-07 62.4 113 34.5
A10p27920 Brassica napus HOM05D003132 ORTHO05D003736 2.1e-07 62.0 191 30.4
BraA10t44841Z Brassica rapa HOM05D003132 ORTHO05D003736 2.1e-07 62.0 191 30.4
CARHR095280 Cardamine hirsuta HOM05D003132 ORTHO05D003736 2.1e-07 62.0 192 29.7
Lsat_1_v5_gn_2_115101 Lactuca sativa HOM05D003132 ORTHO05D003736 2.1e-07 62.0 124 33.9
TPR.G32950 Trifolium pratense HOM05D003132 ORTHO05D003736 2.1e-07 62.0 140 33.6
Glyma.04G254000 Glycine max HOM05D003132 ORTHO05D003736 2.7e-07 61.6 308 26.0
Glyma.06G108200 Glycine max HOM05D003132 ORTHO05D003736 2.7e-07 61.6 225 26.7
HanXRQChr15g0496671 Helianthus annuus HOM05D003132 ORTHO05D003736 2.7e-07 61.6 373 24.1
TAR628G0266 Trochodendron aralioides HOM05D003132 ORTHO05D003736 2.7e-07 61.6 193 29.0
BcaB06g26045 Brassica carinata HOM05D003132 ORTHO05D003736 3.6e-07 61.2 144 32.6
Thhalv10020497m.g Eutrema salsugineum HOM05D003132 ORTHO05D003736 3.6e-07 61.2 192 30.7
Potri.005G171500 Populus trichocarpa HOM05D003132 ORTHO05D003736 3.6e-07 61.2 115 34.8
Sabra05G0129000 Salix brachista HOM05D003132 ORTHO05D003736 3.6e-07 61.2 115 34.8
AT3G19770 Arabidopsis thaliana HOM05D003132 ORTHO05D003736 4.7e-07 60.8 192 30.2
arahy.Tifrunner.gnm1.ann1.KS02B5 Arachis hypogaea HOM05D003132 ORTHO05D003736 4.7e-07 60.8 115 34.8
arahy.Tifrunner.gnm1.ann1.M9VU1N Arachis hypogaea HOM05D003132 ORTHO05D003736 4.7e-07 60.8 115 34.8
EL10Ac1g00043 Beta vulgaris HOM05D003132 ORTHO05D003736 4.7e-07 60.8 124 31.5
BcaC05g28420 Brassica carinata HOM05D003132 ORTHO05D003736 4.7e-07 60.8 115 34.8
BolC5t33226H Brassica oleracea HOM05D003132 ORTHO05D003736 4.7e-07 60.8 115 34.8
CBR_g241 Chara braunii HOM05D003132 ORTHO05D003736 4.7e-07 60.8 261 26.4
Thhalv10012815m.g Eutrema salsugineum HOM05D003132 ORTHO05D003736 4.7e-07 60.8 267 26.6
Nitab4.5_0002247g0160 Nicotiana tabacum HOM05D003132 ORTHO05D003736 4.7e-07 60.8 113 34.5
Nitab4.5_0004014g0020 Nicotiana tabacum HOM05D003132 ORTHO05D003736 4.7e-07 60.8 113 34.5
PGR044G0368 Punica granatum HOM05D003132 ORTHO05D003736 4.7e-07 60.8 202 28.7
BraA05t21832Z Brassica rapa HOM05D003132 ORTHO05D003736 6.1e-07 60.5 144 32.6
Cpa.g.sc828.2 Carica papaya HOM05D003132 ORTHO05D003736 6.1e-07 60.5 204 28.9
Haze_00527 Corylus avellana HOM05D003132 ORTHO05D003736 6.1e-07 60.5 200 25.5
Dinv26724 Davidia involucrata HOM05D003132 ORTHO05D003736 6.1e-07 60.5 113 34.5
MD00G1104300 Malus domestica HOM05D003132 ORTHO05D003736 6.1e-07 60.5 124 32.3
Phvul.009G026000 Phaseolus vulgaris HOM05D003132 ORTHO05D003736 6.1e-07 60.5 380 23.7
QL12p035360 Quercus lobata HOM05D003132 ORTHO05D003736 6.1e-07 60.5 126 34.1
unitig_21.g20190 Utricularia gibba HOM05D003132 ORTHO05D003736 6.1e-07 60.5 124 34.7
AL3G33220 Arabidopsis lyrata HOM05D003132 ORTHO05D003736 8.0e-07 60.1 192 29.7
A05p29830 Brassica napus HOM05D003132 ORTHO05D003736 8.0e-07 60.1 144 32.6
COL.COLO4_21818 Corchorus olitorius HOM05D003132 ORTHO05D003736 8.0e-07 60.1 155 31.0
Sc01g0001580 Simmondsia chinensis HOM05D003132 ORTHO05D003736 8.0e-07 60.1 115 33.9
C05p45020 Brassica napus HOM05D003132 ORTHO05D003736 1.0e-06 59.7 145 31.7
PSO170G1030 Papaver somniferum HOM05D003132 ORTHO05D003736 1.0e-06 59.7 115 34.8
Sp3g17790 Schrenkiella parvula HOM05D003132 ORTHO05D003736 1.0e-06 59.7 177 31.1
Ah.05g172730 Amaranthus hybridus HOM05D003132 ORTHO05D003736 1.4e-06 59.3 172 26.2
CiPaw.05G229400 Carya illinoinensis HOM05D003132 ORTHO05D003736 1.4e-06 59.3 115 33.9
AUR62004688 Chenopodium quinoa HOM05D003132 ORTHO05D003736 1.4e-06 59.3 206 26.7
SGA_v2.0_scaffold118G32441 Striga asiatica HOM05D003132 ORTHO05D003736 1.4e-06 59.3 192 28.1
FAN18G1429 Fragaria x ananassa HOM05D003132 ORTHO05D003736 1.8e-06 58.9 115 33.9
Peaxi162Scf00647g00129 Petunia axillaris HOM05D003132 ORTHO05D003736 1.8e-06 58.9 113 34.5
VMungo1309G0264 Vigna mungo HOM05D003132 ORTHO05D003736 1.8e-06 58.9 403 23.8
AT5G09320 Arabidopsis thaliana HOM05D003132 ORTHO05D003736 2.3e-06 58.5 190 28.9
CAN.G134.60 Capsicum annuum HOM05D003132 ORTHO05D003736 2.3e-06 58.5 312 24.7
MD15G1358700 Malus domestica HOM05D003132 ORTHO05D003736 2.3e-06 58.5 163 30.1
Psat5g133920 Pisum sativum HOM05D003132 ORTHO05D003736 2.3e-06 58.5 140 31.4
Atru.chr13.1311 Acer truncatum HOM05D003132 ORTHO05D003736 3.0e-06 58.2 115 33.0
Atru.chr13.1355 Acer truncatum HOM05D003132 ORTHO05D003736 3.0e-06 58.2 115 33.0
ATR0171G023 Amborella trichopoda HOM05D003132 ORTHO05D003736 3.0e-06 58.2 172 29.1
ATR0495G010 Amborella trichopoda HOM05D003132 ORTHO05D003736 3.0e-06 58.2 172 29.1
BcaB08g37215 Brassica carinata HOM05D003132 ORTHO05D003736 3.0e-06 58.2 278 24.8
CiPaw.06G024400 Carya illinoinensis HOM05D003132 ORTHO05D003736 3.0e-06 58.2 113 34.5
Dinv27388 Davidia involucrata HOM05D003132 ORTHO05D003736 3.0e-06 58.2 115 33.0
FAN08G0026 Fragaria x ananassa HOM05D003132 ORTHO05D003736 3.0e-06 58.2 115 33.0
Thecc.08G116200 Theobroma cacao HOM05D003132 ORTHO05D003736 3.0e-06 58.2 256 25.0
TAR624G0618 Trochodendron aralioides HOM05D003132 ORTHO05D003736 3.0e-06 58.2 248 27.0
TAR628G0652 Trochodendron aralioides HOM05D003132 ORTHO05D003736 3.0e-06 58.2 267 26.2
Cfa015956 Carpinus fangiana HOM05D003132 ORTHO05D003736 4.0e-06 57.8 193 26.9
PSO017G5000 Papaver somniferum HOM05D003132 ORTHO05D003736 4.0e-06 57.8 206 28.6
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 5.2e-06 57.4 188 29.8
Duzib041G0476 Durio zibethinus HOM05D003132 ORTHO05D003736 5.2e-06 57.4 234 26.5
FvH4_3g37600 Fragaria vesca HOM05D003132 ORTHO05D003736 5.2e-06 57.4 212 27.4
SalBow7G2329 Salvia bowleyana HOM05D003132 ORTHO05D003736 5.2e-06 57.4 115 33.9
Carub.0006s0787 Capsella rubella HOM05D003132 ORTHO05D003736 6.7e-06 57.0 190 28.4
Prupe.1G506400 Prunus persica HOM05D003132 ORTHO05D003736 6.7e-06 57.0 179 29.6
Hund20801 Selenicereus undatus HOM05D003132 ORTHO05D003736 6.7e-06 57.0 115 32.2
SGA_v2.0_scaffold28G12034 Striga asiatica HOM05D003132 ORTHO05D003736 6.7e-06 57.0 113 33.6
CSS0019182 Camellia sinensis var. sinensis HOM05D003132 ORTHO05D003736 8.8e-06 56.6 202 27.7
Carub.0003s1964 Capsella rubella HOM05D003132 ORTHO05D003736 8.8e-06 56.6 254 27.2
Ciclev10001011m.g Citrus clementina HOM05D003132 ORTHO05D003736 8.8e-06 56.6 231 25.5
Migut.C01198 Erythranthe guttata HOM05D003132 ORTHO05D003736 8.8e-06 56.6 173 30.1
Manes.18G072550 Manihot esculenta HOM05D003132 ORTHO05D003736 8.8e-06 56.6 115 32.2
RcHm_v2.0_Chr7g0240821 Rosa chinensis HOM05D003132 ORTHO05D003736 8.8e-06 56.6 193 27.5


User provided reference genes

Program Settings